Amar002562.1
Basic Information
- Insect
- Agriopis marginaria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_932301435.1
- Location
- CAKOAR010000022.1:2506953-2518496[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-15 1.4e-11 44.2 0.0 1 38 67 105 67 110 0.94 2 2 4.3e-19 7.6e-16 57.9 0.0 1 43 274 317 274 319 0.95
Sequence Information
- Coding Sequence
- ATGATGTGTCTCTCCAGCAGACCTGAAGAGAAGCCAGCACCGTCGTCTCCCAGCCTGGGAGAACAGCCCCTCGACCTGAGCGCCAAGTCTACCTCCAGTGCTAGCGGCACGCCACCCCCTGATGCTAGGAGCTTGGACAACCGATTGAAACGAGCAATCTTAGATGGTGCTTGCAACAGTGCGACCAAACGGAACTACACTGAAGATGAGCTCCAATGCGCGTTGCGTGACATCCAATCAGGCAAGCTGGGTACGCGGCGAGCTGCTTTGGTATACGGCATCCCTCGTTCCACCCTCCGGAACAAAGTCAACAAGTTTGGCTTCACAACAGATGCCCACGAGACGGACCCTGAAAGTGACCCTGAAGGGACTGACTCCCCACCCTCTGTCATCCTCAAGATACCAACCTTTCCACCGCCGGACGACAAAAGCTCTTCCCCTGCCACTTCAGTCACCACTCCCATCACACCATTAACGCCGATGCTTCCGAACCTCCAAGGTCAAGTCAACCCTTCGCACTTGTTATTACCACCGTCAGTCTACGCTGACTCTCCGTCGTCACAACATCTGTTCTCCCTCAATGACGTCATAGCAAAAAGCATCAGCCAAAAGTTCCAGCAGCCACCTGACAGGCTACACTCAGACATGCCCTTTATGAGAGCGCCGGATAGACACGTCTCGGTCATCAAAACGCCTCCAGATAATCAGAGAAATCAATACCAGGGTCCTAGCAATTCGAGGAGTCACCCGAATAACAATGGCCAGCCAGCCGCAGGTGGGAAAGGCACGAGACCGAAGCGAGGGAAGTACCGAAACTACGATAGAGACAGTTTAGTTGAAGCGGTGAAAGCCGTGCAGAGGGGAGAAATGTCTGTGCACAGAGCCGGGAGCTACTACGGCGTTCCACATTCTACTTTGGAGTATAAGGTTAAAGAGCGGCACCTAATGAGACCAAGGAAGCGCGAGCCGAAACCGCAACCGGATGTGAAGCCACAGCCGCCCAAACCTCCGCCGCCAAAGCCAGCGACGAAACCCTTTCCAAACGGCCTGAATGGGCCCGAGACGCCGAGCTACCCGCCTGGATATCCACCCTTCTGGCCGAGTGCGAGCTTCGCCGCGCATCCTTCTCCAGAGCTGTACGCGTCGCACATGATGCGAAGGCTACGCGAGGAGGTGCCGCCTCCCGCGAATGGGTCCTTCCTAGAGGGTATAATCAGATCGAGCCTGGAGCGGCCAGGCGCGGCACTGCTGCAGCGGCTGAACGAGCCTCGCACGCCGATGGCGGAGTCACCGAGTCTACTACGGCGGTTGGCGGGAGAGCCGGAGGAAGCCCCGGCGGCACGGCGCGCGCGCATTGCCTCCACCGACCGGCAGCTCGCTGCTGAGATGCGCGAGGCCGTCCAGCGGCTGCGCGCGGACAAGCTGCGCCCGCGCAATGGTACTCCCACGCCCCCCGGTGCAGCCTCCCTCTCCCCGCCGCCCGCGCCACCCGCGCCCCCTGATCGGGCCTAG
- Protein Sequence
- MMCLSSRPEEKPAPSSPSLGEQPLDLSAKSTSSASGTPPPDARSLDNRLKRAILDGACNSATKRNYTEDELQCALRDIQSGKLGTRRAALVYGIPRSTLRNKVNKFGFTTDAHETDPESDPEGTDSPPSVILKIPTFPPPDDKSSSPATSVTTPITPLTPMLPNLQGQVNPSHLLLPPSVYADSPSSQHLFSLNDVIAKSISQKFQQPPDRLHSDMPFMRAPDRHVSVIKTPPDNQRNQYQGPSNSRSHPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPPKPATKPFPNGLNGPETPSYPPGYPPFWPSASFAAHPSPELYASHMMRRLREEVPPPANGSFLEGIIRSSLERPGAALLQRLNEPRTPMAESPSLLRRLAGEPEEAPAARRARIASTDRQLAAEMREAVQRLRADKLRPRNGTPTPPGAASLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818280;
- 90% Identity
- iTF_00032827; iTF_00206920; iTF_00205979; iTF_00926516; iTF_00143004; iTF_00044381; iTF_00666430;
- 80% Identity
- -