Basic Information

Insect: Lycaena phlaeas
Gene Symbol: -
Assembly: GCA_905333005.1
Location: HG995170.1:15891386-15902087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 9.2e-06 0.00076 20.3 1.4 1 23 190 212 190 212 0.99

2 30 0.0006 0.05 14.6 0.4 2 20 269 287 268 289 0.92

3 30 0.00012 0.01 16.8 0.3 2 23 313 335 312 335 0.96

4 30 0.00063 0.052 14.6 1.1 1 23 384 406 384 406 0.98

5 30 0.26 22 6.3 1.3 1 23 425 447 425 447 0.97

6 30 5.7e-06 0.00047 21.0 1.6 2 23 485 507 484 507 0.95

7 30 0.00056 0.047 14.7 2.2 2 23 555 577 555 577 0.97

8 30 0.00033 0.027 15.4 2.1 1 23 627 650 627 650 0.98

9 30 0.0048 0.39 11.8 0.5 2 23 707 728 706 728 0.94

10 30 0.00048 0.04 14.9 2.8 2 23 740 761 739 761 0.97

11 30 0.02 1.7 9.8 1.2 2 23 773 794 772 794 0.96

12 30 0.0045 0.37 11.9 0.7 1 23 804 826 804 826 0.98

13 30 1.9 1.6e+02 3.6 8.5 1 23 855 877 855 877 0.96

14 30 0.00016 0.013 16.4 2.0 1 23 888 910 888 910 0.98

15 30 0.0084 0.7 11.0 4.0 1 23 918 940 918 940 0.98

16 30 0.00064 0.053 14.5 0.2 2 23 960 982 959 982 0.97

17 30 0.56 47 5.3 1.5 1 23 1000 1022 1000 1022 0.96

18 30 0.097 8 7.7 3.7 1 23 1029 1051 1029 1051 0.97

19 30 0.015 1.2 10.3 2.5 2 23 1062 1084 1061 1084 0.95

20 30 0.001 0.085 13.9 0.2 2 23 1107 1128 1106 1128 0.95

21 30 1.2 97 4.3 0.5 2 20 1132 1150 1131 1151 0.91

22 30 3.7 3e+02 2.7 3.9 2 23 1171 1193 1170 1193 0.96

23 30 0.0023 0.19 12.8 0.2 2 23 1209 1230 1208 1230 0.95

24 30 0.68 56 5.0 3.5 5 23 1240 1258 1237 1258 0.93

25 30 0.031 2.6 9.2 1.0 2 23 1269 1291 1268 1291 0.95

26 30 0.91 76 4.6 7.2 2 23 1308 1326 1308 1326 0.95

27 30 0.73 61 4.9 0.7 2 23 1400 1421 1399 1421 0.95

28 30 0.00055 0.046 14.7 0.4 2 23 1432 1454 1431 1454 0.96

29 30 4.3 3.6e+02 2.5 0.3 3 23 1471 1488 1470 1488 0.77

30 30 0.29 24 6.2 3.9 2 21 1492 1511 1491 1512 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	9.2e-06	0.00076	20.3	1.4	1	23	190	212	190	212	0.99
2	30	0.0006	0.05	14.6	0.4	2	20	269	287	268	289	0.92
3	30	0.00012	0.01	16.8	0.3	2	23	313	335	312	335	0.96
4	30	0.00063	0.052	14.6	1.1	1	23	384	406	384	406	0.98
5	30	0.26	22	6.3	1.3	1	23	425	447	425	447	0.97
6	30	5.7e-06	0.00047	21.0	1.6	2	23	485	507	484	507	0.95
7	30	0.00056	0.047	14.7	2.2	2	23	555	577	555	577	0.97
8	30	0.00033	0.027	15.4	2.1	1	23	627	650	627	650	0.98
9	30	0.0048	0.39	11.8	0.5	2	23	707	728	706	728	0.94
10	30	0.00048	0.04	14.9	2.8	2	23	740	761	739	761	0.97
11	30	0.02	1.7	9.8	1.2	2	23	773	794	772	794	0.96
12	30	0.0045	0.37	11.9	0.7	1	23	804	826	804	826	0.98
13	30	1.9	1.6e+02	3.6	8.5	1	23	855	877	855	877	0.96
14	30	0.00016	0.013	16.4	2.0	1	23	888	910	888	910	0.98
15	30	0.0084	0.7	11.0	4.0	1	23	918	940	918	940	0.98
16	30	0.00064	0.053	14.5	0.2	2	23	960	982	959	982	0.97
17	30	0.56	47	5.3	1.5	1	23	1000	1022	1000	1022	0.96
18	30	0.097	8	7.7	3.7	1	23	1029	1051	1029	1051	0.97
19	30	0.015	1.2	10.3	2.5	2	23	1062	1084	1061	1084	0.95
20	30	0.001	0.085	13.9	0.2	2	23	1107	1128	1106	1128	0.95
21	30	1.2	97	4.3	0.5	2	20	1132	1150	1131	1151	0.91
22	30	3.7	3e+02	2.7	3.9	2	23	1171	1193	1170	1193	0.96
23	30	0.0023	0.19	12.8	0.2	2	23	1209	1230	1208	1230	0.95
24	30	0.68	56	5.0	3.5	5	23	1240	1258	1237	1258	0.93
25	30	0.031	2.6	9.2	1.0	2	23	1269	1291	1268	1291	0.95
26	30	0.91	76	4.6	7.2	2	23	1308	1326	1308	1326	0.95
27	30	0.73	61	4.9	0.7	2	23	1400	1421	1399	1421	0.95
28	30	0.00055	0.046	14.7	0.4	2	23	1432	1454	1431	1454	0.96
29	30	4.3	3.6e+02	2.5	0.3	3	23	1471	1488	1470	1488	0.77
30	30	0.29	24	6.2	3.9	2	21	1492	1511	1491	1512	0.94

Sequence Information

Coding Sequence: ATGGCTCTCAAGTTGGGAAAATGTAGGCTTTGCCTCAAACTTGGAGATTTTTGTTCTATCTTCACGATGGATAACAATATTCAACTCGCCGAGATGGTTATGGAATGTGCCCGTGTAAAAATTTATGATGGAGATGGACTCCCGGATAAAATATGCAACGAGTGCATACAAAAACTGAGCGGAGCTCACATCTTTAAACAGCAATGTGAGCGTTCGGACCAGGAGTTAAGACGAAATTATGTTCCACCGCCGGGTTTTAGTATAACACCGCCACCAAATAGACAAAGCAGTGATTCTGCATTTTCCTCGCAAACCGAAGTATCGAAACCCTCGTCTACAGTAGAAACCAAAGTCACACCGAAAGCCCGTAGTCGCAAACGAAGTGGGGATAGTATAGATGGTGCATCAGTGAGCAGCCAATCCCATGATTATCGCCATGGCGTCAACAAACGAGTGGATGAATTACGCAAGGCACCGAAAAAAGCTAGATACACCTCCGACTCTGACTACGAAGACAACAGTGGCTCGTTATACTCAGCGGAGACTGATTCTGATGAAATGTTGGATTTTAAATGTAAACTGTGCCCAAAGGCATTTAAGTCCACCAAAAGTTTAAGCGCGCATCAAAAGGTACATAAGAGAAAGTCGAGACAAGATGAATCAATCTGGTCATCTAAAGATAACGATACCGACTTAGATGATACGGTTAAAAGTACAGACGCCGATACCAGTGCTAATGCGTCGAATTCAACATTCGACGCGTCGAAAACCTTCGAAGACGCAATGGATATGGATGACAAGCTTAGCTGCGACAAATGCGATAAAACTTTCAAATTAAAAATAATGCTAAAACGCCACTACGAGATATGTGGTAAATCACCCCAAAAGACACTGCAGGTGTCGCTAAAACCTCTAGAGTTGCCATTAAATGTTATTAGTTGTGAAATGTGCACAGCACAATTTAAGACAGTGGATAATCTGGAAAAGCACATGAGAAACGCCCACGCGGCTGTGTTAAAGAGGAACAGCGATATCAATACGGCCACTTCAATATCTGTGCCGTGCTACTATTGTCGGGAGGAATTTGACGAATTCGTCGCCTACAAAACTCATTTCGAAAGCTGTCCGCAAACGAAAGACTTGCTGGAATTTCAGTGTCTTCTTTGCCAGAGAGTGTTATCGAGGAAAAATAGTTACAATGCGCATATAAAATCACATTTTTTCCCAACACATACTACTAGGTTTCCCAATGTAAAGCCTGAATCGCCAGGTCACCAATGTCGTTTTTGCAGCATATATTTACCTTCTCAGGATCAATTAATACTTCATTTGTCAAAACATATGTCAAATATAGATGAGTCGAATGGTGATGATGAATCAAGGGCAAGTACAATAGCCGATTCAGCATCTGTGCAGTCTGAGTACAGCGGTAGTGTGCAAAACGGAAATTTAAGCTGTACCTACTGCGGAAAAACCTTTACATACAAAAAGTCTTTAATGTCTCACATAGCCAAATTTCATGGTGACAATGAGGGTAATGTGAAAAATGAGCCTCCGGATAAAAAAGTCTCGTCAGACCTACTCAGCGAAACAAACCAAACGATGAATAATACTGGATTGACGGAATCTGAATCTAGTCAAGACGAAGGCGAGGACGACAACACGTGTGATATCTGCGAAAAACAGTTTTCGTACCGACGCCTCTTACTGCAACACAAACGGACCAAACACAACATGACGGCGGGCACGAAACGCGCCAAGATCAATCTGAAGGACTGCACCGTGCGGTGTCTCATTTGCGACATCGAGATGAAAGTGAGCGATATAAACGAACACAATCAGACTCATATATCGGTGAACATAAAGCCGAGGAACATTTACACTTGTACACTATGCACGAATACATTCAAGAGCTGCAGCGCTCTCGCGACTCATATCAAGATGGTGCACCGGTTGAAGCAACAGCAGCCGAAATTGGACATGTCAGCGCCCAACCTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAGCCTCTGGATGTTATTCCCGGTCACAACGACTATAGCGAGGCATCCGCCAATGAAACCACACCCCTCGTGAACATGAGCGGGTTGACGTGTCACATCTGCAGCAAACAGTTGCCCACGCTCGTGTCTCTCAAGAGGCACATCGGCTGGCACAAGAACGTTGGCAACAACATACAGAAGATCGTCGAGTGCTTTGTTTGTAATGAGTCGTTCAGGTTCCAACGCCACTACAAGCTGCACATGCGCGAGCACTACACCGACACTAACCTCGATCCAAAGCACCTCACGTGTCCGATTTGCAACCGCAAAAGCAAACACCTCCGCGCCGCCCAAGCGCATATGAACTTCCACAAACAAACTAGATTCAAAAGTAAAGACTACGAGTGCTCAATATGCAAACGCGTTTTCCAATATCGCAAAGTTTATCTATCTCATATGGCCGTACACTTTAAAAAGGGCGACAGTTCTGTCAATACTATAGTCGGCTCCATGCTACCCAACAACACCGATAAGAGTGTACTCGATGGAAAACACACGTGCCATCTATGCGGCAACGTATGCCACTCCGAAAACTCTCTGAAACACCATCTCATTTGGCACAAGTCTAAGACGGTCTTGTTCGGAGCGAGACACGAATGCGATATTTGTACTATTGTTTTCACTAACAAGAGAAGATTGGAATTGCATTACAGGACACATTTTGAGGACGAAAACGGGCCCTTTAAATGTCATATATGCGGCAAAGGTTACATAGTGGAAGATTACTGCAAGAAGCACATAAAGTCGCACAATTTCGACAATCAATCTCACAAAAAGCGATTAGAGCGACTTAGAAAGGATAAAGTAAAATGTCCTATTTGCTCACGGTATTATCCGGACTTGGTCAAACTAATACGTCACTTGCGAAGAACGCACCCTGAGAGCAAAATGATCAAAGAAGATCCCGACGCCCCACCGCCAAATTATTATTCGTGTAAACTGTGCGCCAAGGTGTTCCTAGACGAACGACGGTTGCAACATCACGAGGAATCCCATTTGCGAAAGCCAGAATTTTTCAAATGTAAATTCTGCGGCAAGAAGACCATTTCTTTGAAAAATCACAGGGTTCACATTAAGGGCCATTTGACACAAAAATATTTCGACAATCCTCTGAAATGCCCTCACTGTGAAGAGATGTTTCAAAGAGGTTACGACTTGCACTATCACCTGCGCGATAATCACGATATTAACGAAACGTGGATAGCAGAACGCGGCACTACAACTCTCAATGGCCCCTTAAAAGATCTCCAGTGTTCTATCTGTTATAAAGTTTTAGCCAGCAAAGGTAATTACGAGAGACACATCGATTACCATAACTCTCTGCGCTGCAACTACTGCTTCGAATATTTCAATTCTCTTAGATTTTTAGAAGGTCACCTCACATTTAGATGCGAGAAAAAGAAACTACTGGGCGATACAGAAGTTTACCCTAAGAAAGTTAAATGCGATTTGTGTTACAAAGCTTTCCATCTGCAGGTGAAATTAGACTGCCATATGAGGACGCAACACAATATCAAAGTCTTCAAGGAGGCATCTGTTGGTAAAAAGGAGATCGTCTGTGACTACTGTTTCAAAGTGTTCGAGAACGAGTATGCTTTGAGCACTCATAAGATTTATCATCGCACTGTTGGCTTTTATGGATGTATTTATTGTGCTAGAAAATTCAACACTTTATCTTCATACAAGAAACATAAAAATCATCATTTCTCTCAACTGAATGTGGATAATCCTACGAAATGCGACCACTGCGACGAAAAATTCGTTGCTTTTAGAGAAATGATATATCACATGCGAGATGTGCATGGCGACGACAAAGAGTGGATCATCATGCCAAAGGAATCGATCGAAGAAAAATGCAACATATGTCACAAGACGTTCTTCAATCTTCATAGACACATGGAATATCACGAGGAAAATAGGTGTAAAAAATGCGGTGAATATTTCTTCTCGTCAATAGAGTGCGATAATCATCTATGTACTATCGATAGCGATGAAGAAGTTACGGACAACGCTAACGTAGAAGATATTCGCCCTAAATACGAAGAGTGTAGCTTTTGCTTCAAACCTACCACTAGGAAGAATTCCAAGCGACTTCACGAGCACATACACAAAGGCTCAGGGTCGATATCTTGCCGATTCTGTGTCCTCAAATTTAAAACTATGGACGCATTTAACATTCACGCTTTCACGCACAGAAGTAGAAAGTATAAATTGAAACCGATCAAATGTAAGAAATGCGGCGAGCAGTTCGTACAGTACGGTCCATTCATTAAACACATGAAAAATGTACACAAGTGCGTTAAAAAGTTACATTATAGGACAATAGTGAAGGCAGAGCCGTGTGCGGTGTGCGGTGAAGATTTCCCGAATTTGCACAATCACTATCGAGCGCATTTACAGAACCAGTGCCAACTTTGCCATAAGTACTTCACCTCAAGCCGTCTATACAGCTTGCATCAGTGTGACAAGGAAGACTCGGATCCAACGAAAGTTTTTACAACGGACGTTGATTTGATTAAACTTATAAACGAATACGTTCCTAAAGATGAGAAAGATGATGAAAAATATTACGGCTTTGAAAATGAGGAGGAAGTTGATGAAATGGAACAATCAGTAAAAGGACCGACTAAAGCAATTAATAATTCTACACCTGCTCCTATCTCACATGACGATGAGAGTCAAAATTCCGTGGATCCAGATGAAGGGGAACTGCACGAGATGGTCCATGCTCCCATCATATCGGATGTGTTGTCTTTGTATCATAAAAAGGAAGCAAAGAAAAGTGCTAAGGAAGATGATGATGACGAAGTCGTTATAGTAATTCAAGAAGACTCTAATGATAGTGTTGTAGTGATTAACGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFCSIFTMDNNIQLAEMVMECARVKIYDGDGLPDKICNECIQKLSGAHIFKQQCERSDQELRRNYVPPPGFSITPPPNRQSSDSAFSSQTEVSKPSSTVETKVTPKARSRKRSGDSIDGASVSSQSHDYRHGVNKRVDELRKAPKKARYTSDSDYEDNSGSLYSAETDSDEMLDFKCKLCPKAFKSTKSLSAHQKVHKRKSRQDESIWSSKDNDTDLDDTVKSTDADTSANASNSTFDASKTFEDAMDMDDKLSCDKCDKTFKLKIMLKRHYEICGKSPQKTLQVSLKPLELPLNVISCEMCTAQFKTVDNLEKHMRNAHAAVLKRNSDINTATSISVPCYYCREEFDEFVAYKTHFESCPQTKDLLEFQCLLCQRVLSRKNSYNAHIKSHFFPTHTTRFPNVKPESPGHQCRFCSIYLPSQDQLILHLSKHMSNIDESNGDDESRASTIADSASVQSEYSGSVQNGNLSCTYCGKTFTYKKSLMSHIAKFHGDNEGNVKNEPPDKKVSSDLLSETNQTMNNTGLTESESSQDEGEDDNTCDICEKQFSYRRLLLQHKRTKHNMTAGTKRAKINLKDCTVRCLICDIEMKVSDINEHNQTHISVNIKPRNIYTCTLCTNTFKSCSALATHIKMVHRLKQQQPKLDMSAPNLADFCEVVVTKAEPLDVIPGHNDYSEASANETTPLVNMSGLTCHICSKQLPTLVSLKRHIGWHKNVGNNIQKIVECFVCNESFRFQRHYKLHMREHYTDTNLDPKHLTCPICNRKSKHLRAAQAHMNFHKQTRFKSKDYECSICKRVFQYRKVYLSHMAVHFKKGDSSVNTIVGSMLPNNTDKSVLDGKHTCHLCGNVCHSENSLKHHLIWHKSKTVLFGARHECDICTIVFTNKRRLELHYRTHFEDENGPFKCHICGKGYIVEDYCKKHIKSHNFDNQSHKKRLERLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQHHEESHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYFDNPLKCPHCEEMFQRGYDLHYHLRDNHDINETWIAERGTTTLNGPLKDLQCSICYKVLASKGNYERHIDYHNSLRCNYCFEYFNSLRFLEGHLTFRCEKKKLLGDTEVYPKKVKCDLCYKAFHLQVKLDCHMRTQHNIKVFKEASVGKKEIVCDYCFKVFENEYALSTHKIYHRTVGFYGCIYCARKFNTLSSYKKHKNHHFSQLNVDNPTKCDHCDEKFVAFREMIYHMRDVHGDDKEWIIMPKESIEEKCNICHKTFFNLHRHMEYHEENRCKKCGEYFFSSIECDNHLCTIDSDEEVTDNANVEDIRPKYEECSFCFKPTTRKNSKRLHEHIHKGSGSISCRFCVLKFKTMDAFNIHAFTHRSRKYKLKPIKCKKCGEQFVQYGPFIKHMKNVHKCVKKLHYRTIVKAEPCAVCGEDFPNLHNHYRAHLQNQCQLCHKYFTSSRLYSLHQCDKEDSDPTKVFTTDVDLIKLINEYVPKDEKDDEKYYGFENEEEVDEMEQSVKGPTKAINNSTPAPISHDDESQNSVDPDEGELHEMVHAPIISDVLSLYHKKEAKKSAKEDDDDEVVIVIQEDSNDSVVVIND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00787029;
90% Identity: iTF_00787029;
80% Identity: -