Hhel011461.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Helleia helle
Gene Symbol
-
Assembly
GCA_963853865.1
Location
OY971421.1:4011870-4020490[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 6.6e-06 0.0007 20.8 4.4 1 23 190 212 190 212 0.99
2 30 0.00093 0.099 14.0 0.5 2 20 269 287 268 289 0.92
3 30 0.0067 0.71 11.3 0.2 2 23 313 335 312 335 0.94
4 30 4.2 4.4e+02 2.5 0.1 2 19 352 369 351 372 0.91
5 30 0.0094 1 10.8 2.6 1 23 382 404 382 404 0.98
6 30 0.13 14 7.2 1.6 1 23 423 445 423 445 0.97
7 30 1.6e-05 0.0017 19.6 0.9 2 23 483 505 482 505 0.95
8 30 0.032 3.4 9.2 1.9 2 23 553 575 553 575 0.97
9 30 0.023 2.5 9.6 1.0 1 23 625 648 625 648 0.95
10 30 0.02 2.1 9.8 0.6 2 23 705 726 704 726 0.94
11 30 0.00047 0.049 14.9 2.9 2 23 738 759 737 759 0.96
12 30 0.02 2.1 9.8 1.2 2 23 771 792 770 792 0.96
13 30 0.04 4.2 8.9 0.7 1 23 802 824 802 824 0.95
14 30 0.39 42 5.7 8.4 1 23 853 875 853 875 0.96
15 30 7.1e-05 0.0075 17.5 0.8 1 23 886 908 886 908 0.99
16 30 0.041 4.4 8.8 3.9 1 23 916 938 916 938 0.97
17 30 0.00064 0.068 14.5 0.2 2 23 958 980 957 980 0.97
18 30 0.56 59 5.3 1.5 1 23 998 1020 998 1020 0.96
19 30 0.096 10 7.7 3.7 1 23 1027 1049 1027 1049 0.97
20 30 0.0038 0.4 12.1 1.9 2 23 1060 1082 1059 1082 0.95
21 30 0.0029 0.31 12.4 0.2 2 23 1105 1126 1104 1126 0.95
22 30 1.2 1.2e+02 4.3 0.5 2 20 1130 1148 1129 1149 0.91
23 30 3.5 3.7e+02 2.7 3.9 2 23 1169 1191 1168 1191 0.96
24 30 0.0023 0.24 12.8 0.2 2 23 1207 1228 1206 1228 0.95
25 30 0.64 68 5.1 3.6 5 23 1238 1256 1235 1256 0.93
26 30 0.014 1.5 10.3 0.7 2 23 1267 1289 1266 1289 0.95
27 30 1.5 1.6e+02 3.9 6.4 2 23 1306 1324 1306 1324 0.94
28 30 0.0049 0.52 11.7 0.6 2 23 1430 1452 1429 1452 0.96
29 30 4.3 4.6e+02 2.5 0.3 3 23 1469 1486 1468 1486 0.77
30 30 1.1 1.2e+02 4.3 3.9 2 21 1490 1509 1489 1510 0.94

Sequence Information

Coding Sequence
ATGGCTCTCAAGTTGGGGAAATGTAGGCTTTGCCTCAAACTTGGAGATTTTTGTTCTATCTTCACCATGGATAACAATATTCAACTCGCCGAGATGGTTATGGAATGTGCCCGCGTaaaaATTTATGATGGTGATGGACTACCAGATAAAATATGCAATGAGTGCATACAAAAACTAAGCGGAGCTCACATCTTTAAACAACAATGTGAGCGTTCGGACCAGGAGCTAAGAAGAAATTATGTTCCACCGCCAGGTTTTAGTATAACACCACCACCAAATAGACAGAGCAGTGATTCTGCATTCTCTTCACATACTGAGGTATCTAAACCCTCATCTGCAGTAGAAACCAAAGTCACACCGAAAGCCCGTAGTCGTAAACGAAGTGGGGATAGCATAGATGGTGCATCAGTGAGCAGCCAATCTCACGACTATCGCCATGGTGTCAACAAACGGGTGGACGAATTGCGCAAGGTGCCTAAAAAAGCTAGATACACCTCCGACTCTGACTACGAAGACAACAGTGGTTCATTATATTCAGCAGAGACTGATTCTGATGAAACGTTGGATTATAAATGTAAACACTGCACAAAGGCTTTTAGGTCTAACAAAAGTTTAAGCGCGCATCAGAAGGTACACAAGAGAAAGGTCAAACAAGATGAATCCATTTCTTCATCTAAAGAAAACGATACTGACTTAGATGTTACGGTAAAAAGTACAGATGCTGATACTAGTGCTAATGCGTCGAATTCAATATTTGATGCGTCGAAAACCCTTGAAGACGCAATGGATGTGGAGGATAAGCTTAGCTGTGACAAAtgcaataaaacttttaaattaaaaataatgctaAAACGCCACTATGAGATCTGTGGAAAATCACCCCAAAAGACACTGCAGGTTTCGCTAAAACCTCTAGAGCTGCCACAAAATGTTATTAGTTGTGAAATGTGCATAGCACAATTTAAGACTGTGGATAATCTGGAAAAGCACATGAGAAACGCCCACGCAGCCGTGTTAAAGAGAAACAGCGATATCAATACTTTACCATCTGTGCCATGTTACTATTGTCGTGAGGAATTTGACGATTTCGTCGCCTATAAAACCCATTTCGAAAACTGTCCGCAAACGAAAGACTTCCAGGAATTTGTGTGTCTTCTTTGCCAGAAAGTGTTATCAAGAAAAAATAGTTACCACTTGCATATTAAATCACACTTTTTCCCAACTCATAGTACTAAGTTTCCCAATGTAAAGCCTGAATCTCCAGGACATCAATGTCGTTTTTGCAACTTATATTTACCTTCTCAAGATCAATTAATTCTTCATTTGTCAAAACATATGTCAAATATAGATGACTcgaatggtgatgatgaatcaagAGCAAGTACAATAGCCGATTCAGTATCTGTGCAGTCTGAGTACAGCGGTAGTGTGCCCAATGGAAGTTTAAATTGTACCTACTGTGGAAAAAACTTTACATACAAAAAGTCTTTAATGTCTCACATAGCCAAAGTTCATGGTAACAATGATGGTAATCTGAAAGATGAGCCTCCAGATAAAAATGTCTCATCGGACTTGCTTAGCGAAACAAACCAAACGGTGGACAATTCTGGACTGACGGAGTCTGAATCTAGTCAAGACGAAGGCGAAGACGATAATACATGTGATATCTGCGAGAAACAGTTTTCGTACCGGCGCATCTTGCTGCAACACAAACGTACGAAACACAACATGACGGCTGGCACGAAGCGCGCCAAGATCAATCTGAAGGACTGCACCGTGCGGTGTCTCATTTGCGATATCGAGATGAAAGTGAGCGATATAAATGAACACAACCAAACGCATATATCGGTGAACATAAAGCCGAGGAACGTTTATACTTGTATACTTTGCGCCACCACTTTCAAGAGCTGCAGCGGTCTGGCCACTCATATTAAGATGGTGCACCGGCTGAAACAACAGCCACCGAAATTGGACATGTCTGCACCCAACCTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAGCCCTTGGATGTTATTCAAGGTCACAACGGCTTTAATGAGGCGGCCGCCAATGAAACAACACCCCTCGTGAACATGAGCGGGTTGACTTGTCACATCTGTAGCAAACAGTTGCCCACTCTCTTGTCTCTCAAGAGGCACATCGGCTGGCACAAGAATGTTGGCAACAACATACAGAAGATCATCGAGTGCTTTGTTTGTAACGAGTCGTTCAGGTTCCAGCGTCACTACAAGCTGCACATGCGCGAGCACTACACAGATACGAACCTCGACCCAAAGCACCTCACGTGCCCGATTTGCAACCGCAAAAGCAAACACCTCCGCGCTGCCCAAGCGCATATGAACTTCCACAAACAGACGCGATTCAAAAGTAAAGACTACGAGTGCTCAATATGCAAGCGTGTTTTCCAATATCGCAAAATTTATCTTTCTCATATGGCTGTCCACTTTAAAAAGGGCGACAGTTCCGCTAATACCATAGTCGGCTCTATGCTACCCACCACCGCAGATAAGAGCGCACTCGCCGGGAAACACACGTGTCATCTATGCGGCAATGTTTGCCACTCCGAAAGCTCTCTGAAACATCATCTCATTTGGCACAAATCGAAGACGGTCTTGTTCGGAGCGAGATATGAATGCGATATTTGTACTATCGTCTTCACTAACAAGAGAAGATTAGAATTGCATTACAGGTCTCATTTTGAGGACGAAAATGGGCCGTTCAAATGCCATATATGTGGCAAAGGTTATATAGTGGAAGAATACTGCAAGAAACACGTAAAGTCGCACAACTTCGACAATCAATCCCACAAAAAGCGAATAGAGAGGCTTAGAAAAGATAAAGTAAAGTGTCCTATTTGCTCACGGTACTATCCGGACTTGGTCAAATTAATACGTCACTTGCGAAGAACGCACCCTGAGAGCAAAATGATTAAAGAAGATCCCGACGCCCCACCGCCAAATTATTATTCGTGTAAACTGTGCGCCAAGGTGTTCTTGGACGAGCGGCGGTTGCAACATCACGAGGAATCTCATTTACGAAAGCCAGAATTTTTCAAATGTAAATTCTGCGGCAAGAAGACCATCTCTCTGAAGAATCACAGGGTTCACATCAAGGGCcatttgacacaaaaatatatcGACAATCCTCTGAAATGTCCGCACTGTGAAGAGATGTTTATAAGAGGTTATGACTTACACTATCACCTGCGCGACAATCATGATATCAACGAGACGTGGATAGCCGAACGCGGCCCTACAACCCTCAACGGACCTTTAAAAGATCTCCAGTGTTCCATCTGTTATAAAATTTTAGCCAGCAAAGGTAACTACGAGAGACATATAGATTACCACAACTCTCTGCGCTGCAACTATTGCTTCGAATATTTCAATTCCCTTAGATTTTTAGAAGGTCACCTCACATTTAGTTGCGAGAAAAAGAAGCTATTGGGCGATACAGAAGTTTACCCCAAGAAAGTTAAATGTGAATTGTGCTACAAAGCTTTCCATCTGCAGGTGAAATTAGATTGCCACATGAGGACGCAACACAATATCAAAGTCTTTAAGGAGGAATCTGTTGGTAAAAAGGAGATCGTCTGCGACTACTGTTTCAAAGTGTTCGAGAACGAGTATGCTTTGAGTACTCATAAGATCTATCATCGCACTATAGGGTATTACGGATGTATTTATTGTGTTCGAAAATTCAACACTTTATCTTCTTACAAGAAACACAAAAATCATCATTTCGCTCAACTGAATGTGGATAACCCATCAAAATGCGACCACTGTGACGAAACATTCGTTGCTTTTAGAGAAATGATATATCACATGCGAGATGTGCACGCAGACGACAAGGAGTGGATCGTAATGCCAAAGGAATCGATTGAAGAAGAATGCAACATATGTCACAAGAGGTTTTTCAATCTTCATAGACACATGGAATATCACGAGGAAAATAGGTGTAAAAAATGCGGCGAATATTTCAACTCGTCTATAGAATGCGATAATCATCTGTGTACTATTGATAGTGATGACGAAGTTACGGAAAACACTAACGTAACAGATATTCGCCCTAAATATGAAGAGTGTAGCTTCTGTTTCAAACCTACTACCAGAAAGAATTCTCAGCGACTGCACGATTACATGCACAAAAGTTCAGGGTCGATATCGTGCCGATTCTGCTGCCTCAAATTTAAAACTATGGACGCATTTAACATACACGCTTTTACGCACAGAAGTAGAAAGTATAAATTGAAACCAATTAAATGCAAGAAGTGCAGCGAGCAGTTCGTACAGTATGGTCCATTCATAAAACACATGAAAAATGTACACAAATGCgtcaaaaaattacattataggGCGACGGTAAAGGCGGAGCCGTGTGCAGTGTGCGGTGAAGATTTTCCCAATTTACACAATCACTATCGGGCGCATTTGCAGAACCAGTGCCAACATTGCCTCAAGTACTTTACCTCAAGCCGTCTATACAGCTTACACCAGTGTGACAAGGAAGACTCTGAGCCTACGAAAGTTTTTACAACCGATGTGGATTTGATTAAACTTATCAATGAATATGTTCCTAAAGATGAGAAAGACGACGAAAAGTATTATGGCTTTGATAATGAGGAGGAAGTTGATGAAATAGAACCATCAGAAATAGAACCGATTAAAGAAATTGATCATTCTGCAACTGGTCTTATCTCACAGGATGATGAGAGCCAAAACTCCATAGATCCAGATGAAGGGGAACTACACGAGATGGTGCACGCTCCCATTATATCGGATGTGTTGTCTCTGTATCGTAAAAAGGAAGTAAAGAAAAACGCAAAGGAAGCAACGAAAAGCGTAAAGGAAGATGACGACGAAGTCGTTATTGTAATTCAAGAAGACTCCAATGATAGTGTTGTAGTGATTAACGATTGA
Protein Sequence
MALKLGKCRLCLKLGDFCSIFTMDNNIQLAEMVMECARVKIYDGDGLPDKICNECIQKLSGAHIFKQQCERSDQELRRNYVPPPGFSITPPPNRQSSDSAFSSHTEVSKPSSAVETKVTPKARSRKRSGDSIDGASVSSQSHDYRHGVNKRVDELRKVPKKARYTSDSDYEDNSGSLYSAETDSDETLDYKCKHCTKAFRSNKSLSAHQKVHKRKVKQDESISSSKENDTDLDVTVKSTDADTSANASNSIFDASKTLEDAMDVEDKLSCDKCNKTFKLKIMLKRHYEICGKSPQKTLQVSLKPLELPQNVISCEMCIAQFKTVDNLEKHMRNAHAAVLKRNSDINTLPSVPCYYCREEFDDFVAYKTHFENCPQTKDFQEFVCLLCQKVLSRKNSYHLHIKSHFFPTHSTKFPNVKPESPGHQCRFCNLYLPSQDQLILHLSKHMSNIDDSNGDDESRASTIADSVSVQSEYSGSVPNGSLNCTYCGKNFTYKKSLMSHIAKVHGNNDGNLKDEPPDKNVSSDLLSETNQTVDNSGLTESESSQDEGEDDNTCDICEKQFSYRRILLQHKRTKHNMTAGTKRAKINLKDCTVRCLICDIEMKVSDINEHNQTHISVNIKPRNVYTCILCATTFKSCSGLATHIKMVHRLKQQPPKLDMSAPNLADFCEVVVTKAEPLDVIQGHNGFNEAAANETTPLVNMSGLTCHICSKQLPTLLSLKRHIGWHKNVGNNIQKIIECFVCNESFRFQRHYKLHMREHYTDTNLDPKHLTCPICNRKSKHLRAAQAHMNFHKQTRFKSKDYECSICKRVFQYRKIYLSHMAVHFKKGDSSANTIVGSMLPTTADKSALAGKHTCHLCGNVCHSESSLKHHLIWHKSKTVLFGARYECDICTIVFTNKRRLELHYRSHFEDENGPFKCHICGKGYIVEEYCKKHVKSHNFDNQSHKKRIERLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQHHEESHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCPHCEEMFIRGYDLHYHLRDNHDINETWIAERGPTTLNGPLKDLQCSICYKILASKGNYERHIDYHNSLRCNYCFEYFNSLRFLEGHLTFSCEKKKLLGDTEVYPKKVKCELCYKAFHLQVKLDCHMRTQHNIKVFKEESVGKKEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCVRKFNTLSSYKKHKNHHFAQLNVDNPSKCDHCDETFVAFREMIYHMRDVHADDKEWIVMPKESIEEECNICHKRFFNLHRHMEYHEENRCKKCGEYFNSSIECDNHLCTIDSDDEVTENTNVTDIRPKYEECSFCFKPTTRKNSQRLHDYMHKSSGSISCRFCCLKFKTMDAFNIHAFTHRSRKYKLKPIKCKKCSEQFVQYGPFIKHMKNVHKCVKKLHYRATVKAEPCAVCGEDFPNLHNHYRAHLQNQCQHCLKYFTSSRLYSLHQCDKEDSEPTKVFTTDVDLIKLINEYVPKDEKDDEKYYGFDNEEEVDEIEPSEIEPIKEIDHSATGLISQDDESQNSIDPDEGELHEMVHAPIISDVLSLYRKKEVKKNAKEATKSVKEDDDEVVIVIQEDSNDSVVVIND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00925964;
90% Identity
iTF_00925964;
80% Identity
-