Lphl011544.1
Basic Information
- Insect
- Lycaena phlaeas
- Gene Symbol
- tfap2e
- Assembly
- GCA_905333005.1
- Location
- HG995163.1:5341261-5363664[-]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-81 4.1e-77 259.0 0.0 1 196 179 371 179 372 0.97
Sequence Information
- Coding Sequence
- ATGGAGCGCCTCGGCGGCGGCGGGCTGGGGTTGGGCGGCGGCGGGTTCCGCGGCGGGGCCCAGCCCTCGCTCGCGGACTTCCAGCCGCCCTACTTCCCGCCGCCCTTCGCGCCCTCCGCACACCCCGCCAGCCCGCATCATCAACAGCAGAGCCATGGCATGGAGTACAGCGGCGGCGGCGGGGGAGGGGCGGAGTACGCGCAGCACTACGCGCCGCAGCAGCTGCTGCCCCGGCACCACGGCCACCACGAGCCGCACGCGCACCTGCGACACCACCGCGACAACCATGACGTCATACACACGCACCATTTATCGCACGGCGGCTTCAGCTACGGCGGCGGCGAGCGGCGCGCGGACTACGGCGCGCGGGACCAACACGAGCTAGCGCTGCATCACGCACTGCACTCCACAGACGAAACACAAAATGCGGGCATGGACGATACGTCGGGTTTCATGACAGATCTCCCGCTTCTAAAAACAATGAAGGGTCGAGACGGGCTTGGCGGTACTGGTTCGTGTGCACCAAACGACGTGTTCTGCTCAGTGCCGGGAAGACTGTCACTCCTCTCCTCCACCAGCAAGTACAAAGTGACGGTAGCAGAGGTACAGAGGCGGTTGTCGCCACCGGAGTGTCTCAACGCGTCACTATTAGGAGGAGTTTTAAGAAGGGCAAAGAGCAAAAATGGTGGAAGGTTACTTCGGGAGAAGTTAGAAAAAATTGGACTCAACCTACCAGCTGGAAGACGAAAAGCCGCGAATGTTACATTGCTCACATCGCTAGTTGAAGCGGAGGCGGTGCACCTCGCGCGCGACTTCGGCTACGTGTGCGAGACGGAGTTCCCTGCGCGCGCGCTGGCCGAGTACCTGGCGCGGCAGTACGCGGAGCACGACGCGCGCCGCCGCCGCGACCTGCTGCAGGCCACCAAGCAGGTGATAAAGGAGCTGATGGATCTGCTGAACCAGGACCGGTCGCCGCTGTGCAACACGCGGCCACCGCACCTGCTGGAGCCCGCCATCCAGCGACACCTCACGCACTTCTCGCTCATCTCGCACGGCTTCGGCGGGCCCGCCATCGTCGCCGCGCTCACTGCCATACAGAATTTCCTCAACGAGTCATTAAAACATTTAGATAAATTATACCCCCAGAGTGGTATGGTGTCGTCGTCGATGGACAAGACTAAGATGGACCCCGACATCAAGAAGTAA
- Protein Sequence
- MERLGGGGLGLGGGGFRGGAQPSLADFQPPYFPPPFAPSAHPASPHHQQQSHGMEYSGGGGGGAEYAQHYAPQQLLPRHHGHHEPHAHLRHHRDNHDVIHTHHLSHGGFSYGGGERRADYGARDQHELALHHALHSTDETQNAGMDDTSGFMTDLPLLKTMKGRDGLGGTGSCAPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVIKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00405605;
- 90% Identity
- iTF_00786454; iTF_00021025; iTF_01134462; iTF_00149057; iTF_00772564; iTF_00185825; iTF_00326769; iTF_00363713; iTF_00427777; iTF_00622497; iTF_00722721; iTF_00247725; iTF_00246867; iTF_00159515; iTF_01494753; iTF_00007682; iTF_00177761; iTF_00011618; iTF_00237154; iTF_00875842; iTF_00874145; iTF_00874995; iTF_00909442; iTF_01026978; iTF_01435746; iTF_00908483; iTF_00822566; iTF_01501770; iTF_00156878; iTF_00635953; iTF_01197395; iTF_00821462; iTF_01166263; iTF_01360281; iTF_00823615; iTF_01377155; iTF_01545443; iTF_01544552; iTF_01546298; iTF_00017860; iTF_00287748; iTF_00774948; iTF_00887876; iTF_00994052; iTF_01090372; iTF_00930917; iTF_01415505; iTF_00677222; iTF_00687590; iTF_00261526; iTF_00795382; iTF_00771558; iTF_00826502; iTF_01118918; iTF_00323143; iTF_00699783; iTF_00697953; iTF_00700682; iTF_00705667; iTF_00702571; iTF_00701654; iTF_01081223; iTF_01082983; iTF_01386407; iTF_00038376; iTF_00907560; iTF_01149256; iTF_01278952; iTF_01525608; iTF_00055081; iTF_00208489; iTF_00207524; iTF_00213097; iTF_00736297; iTF_00779209; iTF_01041417; iTF_01153545; iTF_01339625; iTF_00071114; iTF_00163978; iTF_01217155; iTF_00405605; iTF_00403384; iTF_00744286; iTF_01178084; iTF_00934420; iTF_01247739; iTF_01222154; iTF_01526698; iTF_00146091; iTF_00787307; iTF_01285227; iTF_01358571; iTF_00012620; iTF_00851372; iTF_00888876; iTF_00708838; iTF_01495468; iTF_01500780; iTF_00120173; iTF_00171437; iTF_00620909; iTF_00809741; iTF_01117933; iTF_01140621; iTF_01341901; iTF_01506029; iTF_01509261; iTF_00666190; iTF_00673998; iTF_01115406; iTF_01170254; iTF_01171148; iTF_01437646; iTF_01493998; iTF_00428687; iTF_01025647; iTF_01157359; iTF_00194864; iTF_00274928; iTF_00432816; iTF_00715494; iTF_00659984; iTF_00659151; iTF_01133402; iTF_00653919; iTF_00412200; iTF_00411079; iTF_00680201; iTF_00725968; iTF_01141328; iTF_01245616; iTF_01367376; iTF_00072401; iTF_00122033; iTF_00274129; iTF_00357105; iTF_00361297; iTF_00779953; iTF_01172945; iTF_01246513; iTF_01144242; iTF_00077171; iTF_00364595; iTF_00960609; iTF_00951475; iTF_01179187; iTF_00027444; iTF_00123028; iTF_00662772; iTF_00784884; iTF_00801492; iTF_00984707; iTF_00954087; iTF_00985673; iTF_00695147; iTF_00642029; iTF_01017421; iTF_01018262; iTF_01150912; iTF_00176789; iTF_00843189; iTF_00824390; iTF_01077862; iTF_01507750; iTF_01080395; iTF_01079541; iTF_01078749; iTF_00250145; iTF_01019906; iTF_01020868; iTF_00796165; iTF_00789927; iTF_00913289; iTF_00032586; iTF_00896458; iTF_00719883; iTF_01172014; iTF_00818049; iTF_01182350; iTF_00212111; iTF_00782324; iTF_00780725; iTF_01181593; iTF_00781500; iTF_00457696; iTF_01259765; iTF_00037462; iTF_00114614; iTF_00142774; iTF_00895606; iTF_00155927; iTF_00154993; iTF_00325049; iTF_01311927; iTF_01388151; iTF_01400951; iTF_01402423; iTF_00111256; iTF_00121080; iTF_01093720; iTF_01264088; iTF_01279864; iTF_01280983; iTF_01439576; iTF_00009689; iTF_00022488; iTF_00256537; iTF_00255501; iTF_00810681; iTF_00878553; iTF_01203725; iTF_01202931; iTF_01076057; iTF_00842330; iTF_01033405; iTF_00850266; iTF_00959098; iTF_01027930; iTF_01436698; iTF_00249403; iTF_00345499; iTF_00648795; iTF_00673179; iTF_01424731; iTF_00184988; iTF_01443516; iTF_00448701; iTF_00745309; iTF_01503517; iTF_00204062; iTF_00358206; iTF_00390046; iTF_00456926; iTF_00774196; iTF_00757822; iTF_00790878; iTF_00926270; iTF_01094590; iTF_00425055; iTF_01428735; iTF_00638339; iTF_00686019; iTF_00737155; iTF_01219467; iTF_00172416; iTF_00639968; iTF_01335616; iTF_01440672;
- 80% Identity
- -