Basic Information

Insect: Luffia ferchaultella
Gene Symbol: -
Assembly: GCA_949709985.1
Location: OX453268.1:3249534-3293999[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.1 3.5e+02 2.8 2.2 3 21 103 121 101 122 0.93

2 15 3.4e-07 3e-05 25.0 4.2 1 23 262 284 262 284 0.98

3 15 7.7e-05 0.0067 17.6 3.1 1 23 290 312 290 312 0.98

4 15 7.8e-06 0.00068 20.8 1.4 1 23 318 340 318 340 0.98

5 15 0.00043 0.038 15.3 2.9 1 23 346 368 346 368 0.97

6 15 1.7e-06 0.00015 22.8 0.8 1 23 374 396 374 396 0.98

7 15 1.1e-05 0.00096 20.3 2.8 1 23 402 424 402 424 0.98

8 15 0.9 78 4.8 0.8 1 23 536 558 536 558 0.95

9 15 0.023 2 9.9 0.6 1 15 564 578 564 581 0.90

10 15 0.13 12 7.5 2.0 1 21 623 643 623 644 0.94

11 15 0.0014 0.12 13.6 4.5 1 23 793 815 793 815 0.97

12 15 0.041 3.6 9.0 0.3 1 20 821 840 821 842 0.95

13 15 0.0087 0.76 11.2 3.2 1 23 953 975 953 975 0.98

14 15 0.00027 0.024 15.9 0.3 3 23 983 1003 981 1003 0.98

15 15 1.6 1.4e+02 4.0 0.4 1 20 1284 1303 1284 1305 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.1	3.5e+02	2.8	2.2	3	21	103	121	101	122	0.93
2	15	3.4e-07	3e-05	25.0	4.2	1	23	262	284	262	284	0.98
3	15	7.7e-05	0.0067	17.6	3.1	1	23	290	312	290	312	0.98
4	15	7.8e-06	0.00068	20.8	1.4	1	23	318	340	318	340	0.98
5	15	0.00043	0.038	15.3	2.9	1	23	346	368	346	368	0.97
6	15	1.7e-06	0.00015	22.8	0.8	1	23	374	396	374	396	0.98
7	15	1.1e-05	0.00096	20.3	2.8	1	23	402	424	402	424	0.98
8	15	0.9	78	4.8	0.8	1	23	536	558	536	558	0.95
9	15	0.023	2	9.9	0.6	1	15	564	578	564	581	0.90
10	15	0.13	12	7.5	2.0	1	21	623	643	623	644	0.94
11	15	0.0014	0.12	13.6	4.5	1	23	793	815	793	815	0.97
12	15	0.041	3.6	9.0	0.3	1	20	821	840	821	842	0.95
13	15	0.0087	0.76	11.2	3.2	1	23	953	975	953	975	0.98
14	15	0.00027	0.024	15.9	0.3	3	23	983	1003	981	1003	0.98
15	15	1.6	1.4e+02	4.0	0.4	1	20	1284	1303	1284	1305	0.87

Sequence Information

Coding Sequence: ATGCGAATCAAACAATCTGGTTTTGATGATACCTATTCACAAGTCCACGAAGAAACAGAACAAATCAATGGGCGAGTAGAGGGAGTGACTTCTGGAGCCGAATTAAATACAACAAGTAATAATGATCAGCCATTAGATTTGGGTAAGAGAGTGAAACAAGAACCCAAGTGGGATGTAAAGACAGATTCTCCACAGTGGTATCAATCAATAGGATACATAGGAAAGGCCCTCACAAAGCAGAATTTTAACGACTTAAATGATCTTAAGTCAGCGGGAGAAAAGAAAATTACTATAGTGAAATTGTTCTGTGAAAAATGTTGTACCAAATTTCCTGATCAGATCGCACTAAAAGAGCACATCTGTAACAACTCAAAGAGAAAATCTTGTTCgGCATGTGAAATCAACGGCCAATCGGAAAGGATGACGTCTGGATCAAAAAACTCTCAACTATTGGATGTGGAGATAGCAGTGAAACAAGAACCCAAATGGAATGAACCTGAGGCACCATGCTGGGAGGTTCCCGTAGAGTATGTGGTGCCTAACATGCCACCGGACCTTGAGGAGCGTTTTGAGGCGACTTCGGCAGCGAACGGTATAGCCGCACAAGGTTCCGTTACCGCCGAGGCATCTACTGCATTAGAATACGctgaaaataatcaaatttattcaTATCACAATAGTGAGAATTTTTGCCAACTATTAAGCCAACACATGCTTGCCGACACAAGTGAGAAACGATTTGCTTTTAATACAGATGTGAGTGTACAGACTGGTGAGAAACCGTTTTGTTGTGAGATATGTGATACAAAGTTTAGTCGCTCTACAAACTTGAAGAGGCACATGCGTGTGCACacaggcgagaaaccatttagttgTCAACTGTGCGAGGCTAAATTTTCTCGCTCGAGTCACATGAAGACACACATGAATGTGCATActggtgagaagccatttagttgtgaaTTATGTAAGGCTAAGTTTACTCAGTCAAATAATTTGAAGAAACACATGCTTGTACATACCGGTGAGAAACCGTTCAGTTGCGAAATATGTAATTCTAGGTTTTCTCGATTAAGTCATATGAAGACACATTTAAGCGtgcacactggtgagaaaccttATAGTTGTGAATTATGCGATGCTAAATTTACgcaatcaaataatttaaaaaaacatatgctTGTACATACCGGTGAGAAACCGTTCAGTTGCGAAATATGTAAAGCAAGGTTTTCTCGATCTAGTCATATAAAGACACATATGCGTGTCCATACTGGTGAAAAACCGTATAGTTGTGACAGATTGTCAAAACTGGACATGCGAGTAAAGCAAGAGCCTGGTTATGACACTAGTACTTCGGAACAATGTGAGCTGGTCATTACCCCCATAGTGGTGCAACCACAAAAGGACTCCTCTATTAGCACAGACAGCACAGAGGTGAATAATGACGTGCGTGCAAAACTGATCAATAGAGGAATGGAGAATGGAGAAGAACTTCAAATAAGACATGAGTTATACAGCAGAGCGACAATCCTCAAAAGGCATTTACCGCTTGATGCGAATCCTCTCTATGACAGCATCAATTTGGAAAATGGGAAGACAATGTATTCCTGCAAAATATGCAATGCTAAAGCGAAATATCGTTCGAAAATCCTAGAGCATGTATACCGTCATACCGACGAGAAACGATATCAATGTGACATATGTAATGAAAGGTTTAGATCAAAGTATTACATAAAAGAGCAAGATTGCATACCGGCGAGAAACCGTTTAAGTGTGATGTATGCAGTGCAAGCGGAGTTGTCCTTAACCAGCAGTGTCGGTAATCAAGTGCGTACAGCAGAGAAAACAGTTACTTCAACGGGGTATTTCTGCGAAACATGTTCTGTGAAGTTCCCTCATGAAAATGGTTTAAAACAACACATCTGTAACAACAACACGAGGGAGAAACATTGTGTGACAGATGGTGACACACCTGAAGAGCTGATTACAGTGAAGGTCGAAGAAGTAGACCCCAAAAAGAagCTGGAAACTGCTGAAGATGTAGTCAAAGTCGAAATTGACGGTGATGCTTCGAAACTCGACATCGGGCCAACTACATTGCAGCGACAGCTTACGCCAGACCTTGGCATGAGTTTGAATGTAGTCGGTCAGCCATTAGTGAAGCATGAATCTGCACGAGACGAGGACGTCGCAGAGACACCATGCATGACGTCCAGCTCAGCGCTGCTGCTGGAACGGCGTGTGGACTCTGAAATGGAAAACGGCAAACAAGCCCTCTCAAACGTGGAACCAAGAACTGTACTCCAGCATGCTGAACCAATCGAATCTCATAATTTAAAGTTACACACGTCCACACGTACCGGCGAGAAACCGTTTAGTTGTGACGTTTGCGATGCAAAATTTTGTAGAATGCTTCATTTGAAGAGACATATGTACGTACACACGAGTGAGAGTTCATATAAATGTGTTGTATGTAATGCTAAGTTTGTGGATACAAATATGTTGAAGGAACACAGACATGCTTGTAAGGGATCGAGTCGCCTCACTAGTGAGAAGCCATGTGAAGAAAAGTTTTCCCCATCGGGAAACACTGATGCGAGTGACTTGgtaGATGACGGCTTGCATATAAAGATAGTCGAAATAAAAGCGGGcatagaaaattctgaaatcgAACATGAACCAAAAATCATACAGACAGATCTTAAGCAATCTATCCAGCCTGATTCGGCGCAACTGTATGACCATATTTCGGATAACGGAAAGAAAGTGTATTCGTGTAGAATTTGTAATGCGAAAATCAAAAATCGTTCCAGAATGTCGGAGTATATACACCGTCATACAGACGAGAAACCGTATCATTGTGATATATGTTATGCGAGATTTCGATCTAGTTATTATGTAAAAGCTCATAAAAGGTTGCATACCGGCGAGAAACCTTTTGGATGTAATATTTGTGAAGCAAGCTTTAGATTCGCAAGCTCATTGCGCACCCACGAACGCATCCATATTGACGAGGAATCTTATATAAATGATGTTTTTGCTGCTAAATTACGAACTGATAATTATCTTAACCCAAATGAAGAAGTGAACGTCTCGCAACCGCCTCCAACTAACATCGATAAACTAATGtgtaaagaagaaaaaatgGTTAGTTCAATAAAGTTGTCCTGTGATACATGTTATATTGGATTCACAGATCAAAATGCTATGAATGATGAGGCAAAGATATATACGGCGCACAACGGGTCGTTCAAGACAGAGGCTGACAGTGAAATGCCGCATAGTACACAGGAATTGGACGTCGGCCCAACTGTACTACAGCCACGAGTTACGCTTAGTCCAACCCAACGCGTGGCAgagGACGAAGACGTCGAAACAGATCGAAGCAGGCCGACCGTGAAATCTTTGGCAACCAGCTTCCTAGCGGAGCGGTATACGGAACTTGCTGCTGTTAACCCTGCAGAAGTACAATATGTCACAGAGAGACCTGTTAAATTGAAAGCCACTAAAAAGAAATCACACGCATCTGGACAATTTGCAACCAGTTCCACTAGTAATCAGGACCCAGTAAAAGACGACTTAATCACTACAGCGAAGTCATTctgtgaaaaatttaatatcaccGATTCTAACGAACGAAAAGAACATGTCTGTAGCAACATGAAGGACGAACATCGCATGGTATGCGATTTGATGAGTAAGGAATTGACCAAAGGTGAGGTGGACCATCACCAACCTGATATCAAAGAAGAATTGGATATCGGTCCCGTAGAATTACACAAACGGTTGCCTCCCCGCTCAGACCATTTGTATGACATCACCCATTTGGAAACCGGAAAGAAACTATATTCCTGCTTAAAATgcgatttaaaatacaaatatcgaTCTAGAATATTAGATCATTGGCTGTCGGAATCAGCGAGATTCCACATCGCCAGCGGCCAACCGGATAAAGCCTGTAATTTATAA
Protein Sequence: MRIKQSGFDDTYSQVHEETEQINGRVEGVTSGAELNTTSNNDQPLDLGKRVKQEPKWDVKTDSPQWYQSIGYIGKALTKQNFNDLNDLKSAGEKKITIVKLFCEKCCTKFPDQIALKEHICNNSKRKSCSACEINGQSERMTSGSKNSQLLDVEIAVKQEPKWNEPEAPCWEVPVEYVVPNMPPDLEERFEATSAANGIAAQGSVTAEASTALEYAENNQIYSYHNSENFCQLLSQHMLADTSEKRFAFNTDVSVQTGEKPFCCEICDTKFSRSTNLKRHMRVHTGEKPFSCQLCEAKFSRSSHMKTHMNVHTGEKPFSCELCKAKFTQSNNLKKHMLVHTGEKPFSCEICNSRFSRLSHMKTHLSVHTGEKPYSCELCDAKFTQSNNLKKHMLVHTGEKPFSCEICKARFSRSSHIKTHMRVHTGEKPYSCDRLSKLDMRVKQEPGYDTSTSEQCELVITPIVVQPQKDSSISTDSTEVNNDVRAKLINRGMENGEELQIRHELYSRATILKRHLPLDANPLYDSINLENGKTMYSCKICNAKAKYRSKILEHVYRHTDEKRYQCDICNERFRSKYYIKEQDCIPARNRLSVMYAVQAELSLTSSVGNQVRTAEKTVTSTGYFCETCSVKFPHENGLKQHICNNNTREKHCVTDGDTPEELITVKVEEVDPKKKLETAEDVVKVEIDGDASKLDIGPTTLQRQLTPDLGMSLNVVGQPLVKHESARDEDVAETPCMTSSSALLLERRVDSEMENGKQALSNVEPRTVLQHAEPIESHNLKLHTSTRTGEKPFSCDVCDAKFCRMLHLKRHMYVHTSESSYKCVVCNAKFVDTNMLKEHRHACKGSSRLTSEKPCEEKFSPSGNTDASDLVDDGLHIKIVEIKAGIENSEIEHEPKIIQTDLKQSIQPDSAQLYDHISDNGKKVYSCRICNAKIKNRSRMSEYIHRHTDEKPYHCDICYARFRSSYYVKAHKRLHTGEKPFGCNICEASFRFASSLRTHERIHIDEESYINDVFAAKLRTDNYLNPNEEVNVSQPPPTNIDKLMCKEEKMVSSIKLSCDTCYIGFTDQNAMNDEAKIYTAHNGSFKTEADSEMPHSTQELDVGPTVLQPRVTLSPTQRVAEDEDVETDRSRPTVKSLATSFLAERYTELAAVNPAEVQYVTERPVKLKATKKKSHASGQFATSSTSNQDPVKDDLITTAKSFCEKFNITDSNERKEHVCSNMKDEHRMVCDLMSKELTKGEVDHHQPDIKEELDIGPVELHKRLPPRSDHLYDITHLETGKKLYSCLKCDLKYKYRSRILDHWLSESARFHIASGQPDKACNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00924252;
90% Identity: iTF_00924252;
80% Identity: iTF_00924252;