Lfer024227.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- -
- Assembly
- GCA_949709985.1
- Location
- OX453262.1:14520794-14525463[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-44 1.6e-40 140.3 1.4 98 275 11 184 3 184 0.96 2 2 0.49 3.9e+03 -2.0 0.0 77 109 200 234 189 240 0.49
Sequence Information
- Coding Sequence
- ATGAGTTTGGGTGAGACAAAACTGGACACTGCTGGAACGTGGAATCCTCGGGTACCCACGCCAATGTTGAAAGCTTTAGAAACCTGGACCGAAGCCTGCCCACCTTGGGTTCGTGCCGAATGTGTCACACGCTGCGTATTACCAAGATTGGTTGAAGCCGCTAGGGCTTGGGATCCGACTTGCGATACCCAGCCTATACATGTTTGGATATTACCCTGGCATGAAATAGCAGgCGAGGCGCTATCAGCAACTGTCTACCCGATGATCCGATCGAGGCTCGCGACTGCATTGTCTGCGTGGCATCCAGCCGATGCGTCAGCTCGCCCGTTGTTGGCGGCATGGCGTGACGCTTGGGGTCCGGCGCTAACGGCGCTGCTGCACAGGCACGTGCTGCCTAAATTAGAGGCGTGTCTACAAGCGGCGCCGATTGAACTAGTCGGCCGGGAGAACACGGCATGGTTATGGTGCGTCGAGTGGACAGAATTGGCAGGTGTTAGCGCAGTGGGCGGTCTGGCCGCTCGTGCTTTGCTTCCGCGCTGGTTGGCTGCGCTCGCCGCCTGGCTCAACACCGCTCCAGCGCACGCTACAGTTCTCAAATCTTATACTGATTTCAAGAAAATGTTTCCCGACGAAATACTAAGAGAGCCGGCGGTACGCGACGCGTTCCGTAAAGCCTTAGACATGATGAACCGGAGTGCTGACATCGACATGATAGAACCGCCTCCTCCTCCAAGGTTCACCATCGAACCAAAGGAAACGGCCAGGCTCGCTGAAGTCATTGGAAGCGCGAACCAACAAAAGAGTTTCTCAGAATTATTAGAATCTAGATGTATTGAAAGGGGTATAACATATGTGCCCATAGTGGGTCGCAGTAGAGAAGGGAGACCTTTATATAGGATAGGTAACACTATGCAGTGTTTTGTTATaagaaatgtgattatgtaTTCAAATGATTCAGGAAGGACCTTTTTGCCTATTTCAATGGACAAATTGCTTAATATGGCTGAAGAATAA
- Protein Sequence
- MSLGETKLDTAGTWNPRVPTPMLKALETWTEACPPWVRAECVTRCVLPRLVEAARAWDPTCDTQPIHVWILPWHEIAGEALSATVYPMIRSRLATALSAWHPADASARPLLAAWRDAWGPALTALLHRHVLPKLEACLQAAPIELVGRENTAWLWCVEWTELAGVSAVGGLAARALLPRWLAALAAWLNTAPAHATVLKSYTDFKKMFPDEILREPAVRDAFRKALDMMNRSADIDMIEPPPPPRFTIEPKETARLAEVIGSANQQKSFSELLESRCIERGITYVPIVGRSREGRPLYRIGNTMQCFVIRNVIMYSNDSGRTFLPISMDKLLNMAEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -