Lchi016861.2
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- retn
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000182.1:806567-819687[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-20 5.5e-17 62.6 0.0 15 89 24 96 13 96 0.95 2 2 3.6 1.2e+04 -2.5 0.0 23 37 211 225 176 227 0.44
Sequence Information
- Coding Sequence
- ATGCAAATAGCGCGGCCGGGCGTTCGAACGCACGCGCGACGAATCGCGAGTTTTCCGCCGGCGCGCGGGGCACGCGGCACTCCTATAAACCGGCTACCTATAATGGCGAAGTCGGTGCTCGATCTGTACGAGCTTTACAACCTGGTGATAGCCCGCGGCGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCTTAAGACTGCCGTCCTCTATCACGTCGGCCGCGTTTACACTTCGCACACAGTACATGAAGTACTTGTACGATTATGAGTGCGAGAAGAAGAACCTTTCGACACGCAGCGAGTTGGATGCGGCCATCGAAGGCAACAAGAGAGAGGGTCGCCGCGCCTCCGGCCAGTACGACGCGCAGGCGGCACTCGCTATGCCGTCGCTGAACCGCGGTGTTTCGCTGTCGATGCCGCTGGCCCAGCCGCTGGGTTTGCCGCTGGGCGGCGTGCCGCGCATGCCCATGCACGCGGCGCATATTCACAGCCACGACGTCGAGTTCCGCCTGCGCGAGTACATGAAGATGTTACAGCAGCAACGCGAGCTCATGAGAAATGGCTCCGAGTCACCGCCGGGCAGTGGCACGATGATGTCGCCCCGCGAGGCGCTGAACGCAATCGACGTTTCGCGCCTCACGCTGTGGTCACTCTACAGCAACAACAGCAGCCCGCAGCCGGACGTCGAGCCGCAGCGCGAGGCCCTGAATCTCAGTGAAAGTCCGAACTCAAACGCGAGCGGAGGCAAGCGTGAAGCGTGCCGCTCACCGCCGCCGCCGGCCAAGCGCCGCACGCCGCGCCCGCCCTCCCCCCGCGAGCCGTCGCCGCGCCACGCGCTAACCGCACACGTGGCGCACGCTACCCACTCAGCTCACGCTAACCACGCCGCGCACGCCACACACGCGCCACAGCTCAACGGCAACGCTAACGGAGTTAACGGAGCCGCTTTCAAGATCACAACCAGAGGTGACGCAACCACCGGCGACCAACAACTCGTCGTCTCGATTGAGCTCAACGGAGTCACGTACGAAGGAGTTCTTTTCCCCTCACAAAACGGGAACGGACAAAACGGACACAGGCAAAtggtttcttaa
- Protein Sequence
- MQIARPGVRTHARRIASFPPARGARGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLGLPLGGVPRMPMHAAHIHSHDVEFRLREYMKMLQQQRELMRNGSESPPGSGTMMSPREALNAIDVSRLTLWSLYSNNSSPQPDVEPQREALNLSESPNSNASGGKREACRSPPPPAKRRTPRPPSPREPSPRHALTAHVAHATHSAHANHAAHATHAPQLNGNANGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01337558;
- 80% Identity
- -