Lser011031.1
Basic Information
- Insect
- Lucilia sericata
- Gene Symbol
- gata4
- Assembly
- GCA_015586225.1
- Location
- NW:196308-218302[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-17 8.7e-14 50.5 3.7 1 34 1016 1048 1016 1050 0.97 2 2 1e-19 1.9e-16 59.1 4.4 1 36 1070 1104 1070 1104 0.97
Sequence Information
- Coding Sequence
- ATGAAATGTGCCAATAATCGTAATTTACCTCTAACCTCTAAAGTAGCTAAAACCAAAAATCGTGTTAATACTAATAGCAGCAGCAGTAATAATTCTTTATTAACAAATGCTGCCAATATGAAAATCACCAAAGCTATAgtaaattctaaacaaaatcgtaaattaacaaataaaggaTTAACTTCATTGACGACAACAACAGCAAGTCAGTCATTATTAAATAATCTACAACAATACcaaacacaacaacagcagcaaacgAACTATGAAAGAGAAAATGAAATACAAGACAAAGGATCAAAAGAAtccttttttaatacaaaacaggAACAGTTAACAAACTGTTTAAATAATGTTGGGCTACAGAAAGAGATAGAATGTGAAAAAGAGGGAAGATCATCCCTGCAACAGCAGCAAACACCGTTAAACTCCATAGCCACAACAACAACGGCAAATACTACCCtcataaatacaataaattcggatatacaaagaaatacaacaacaagaagaaaTTCACCAACaccagaacaacaacaacaaggaaTAACAATAACAGAAAGAGAGCAacaggcaacaacaacaacaactgctaCTACCAGCGTTGTACACAATGAGTTTTTAGGTTCTGCAACGGCGACAACGGCAACGATCACCACCACACCAACTACGAATTTGAATTTATCGTCTTTGGCTGCTAAGGCACCACAATTCATATCAGTTGTCAACGAAACATCAAACCAAACAGTGTTACGTACATCAGCGACGAACATAAACGAagtacaaaatacacaaaatttgaaaaacgaCGAACAGACACCAAAGATAAACACAATTATAACCACAACAGCAGCGTCTCCAACAACGATAACGAATAATAATTTAGCAACAACAGTCGCTAACATAAATGACGAAGCTAAAGATCAttatcataataaaaaattctcaaatacgAATATAAATGagcaaaaattagaaaattctcataaaaattatacaaataataacaataataataataataaaagtgacGTTTCAGAAAGtgttaacaataataataaaaacaacaataatgatAATAACAGTGTTGAAACGTTAGCCAATcagcaaaaattaattaataatactaatagtgataataatacaaataaaacagtGATAAATCGTGttataactacaacaacaacagcaacaacatcagcagcaacaCCCACAAAttcattagaaaatttaaatgataataacacaacaacaacagcaacaaataatgcaaaaaatcttctaaataataacaacaacaacaacacagctCCACAAAATTATCGTGGCGCTAATAATTCAGTGATAATAACAAattacaatagcaacaacaataataataataacactaATTCTCAAATCCCACAAAGTTCTCTTTATACAACAAGTGAATATATAGCCACCGATAATATACTCAATGCCTCTAGCAATGATCCAAATTTAAATTTGGCAGTTATAGGTTCTACGGCACATTTAACATCACAACAACCCTCACCCTTAACTGGAGCCCAATTGCAGGCGCAATTACCACAACATCACCCCTCTAATACGGAACATTGGTTAAATTCTTATAACTCCTGTGCCTATGATTTATCTTTGAATCATACTCCCTCTAACGGAGATAATACGAATAAAGATTTAATAAATCTGCAGCTTTTTTCGCCGTTGGCTCAATTACATCATACGGCGGCCCATCATAATCCCCATCATTCAGCTAGTACAGCCTATTTTACCAGCTCGGGTCATTTAATAAATCCTGCCAATAGCAGTAGCGTTACTCCTTCTACCACCAATTATTTACACGACGACAATATGCGATCAAATCTAGGACTCTACACCACCACCTATAATCCTCATCACGAGCTTgtgcatcatcatcatcatcctttAATGGGTGTGCAAAATGTTAGTGCCTCTGCTCATACACCAACCAGCATAGATGAGGTTATACAGGACACTTTAAAAGATGAATGCCTGGAAGATCATCATACTGGTGTTAGCTATTTAACACTTTCAAGCTCTGTTGATGTTCAATCCCTAAAGGATTCCTATCATTCGGCCAATTTAACCGAATTAACACATTTACCCTCTATTGCTCCCGCCCATTTGCAAAGCTCTTCACCGCATCATCATTTACAGAGTATACATCATTTACATCATAATAATTCGGCCAGTTCGGGTGCTGAATCTCCTTCACCTTCATCGGCTTTATCGCAGTCGGGTGATATGGCTACTTTGCAAAGTTTTACCCAGTTAACGAATGCCAGTGCTGCGGGTCATCGTGATATCTATACTATGTTGACGGGACCCGATCAATCGCAGCTGTTCAATTTCACCTCACCACCTTCACCGGGACTATCGAATAGTTCAGTGTATGCGGCACCTTTGCTAGCGTCAGCAGCCAATGGCATGCAGTATGGTATGCAGTCAACAGCCTCAGCTTCAACACCTCCGCCAACAGCCTCACAACATCATAGCTCTGGTTCAGGTGTAGCCACTACATCGAGTCAAAGTAATCATACTACCGCTGGGGCTTTAACAACTAACTCCAATAACAATAATCTCAATGAAACAAATTCTCATTCGGATGACTATGGTTCACCCAAAAGTACACAAAGTAATGGtgctggtggtggtggtggtactTTGCCAGCATTCCAGCGTATAGCCACTACTTCCTATAATCAAAATACACATGCTTCAGCAGTCGATCGTTATGGCTCCTTGACTAATTATAGAACTCATAACGATACTTGGTCTAGTCCTTATGAGGCCATTAGTTATGCTCCCTCTTCGGTGGTGGGTAATCAAGCTTTGAATAATGTCCTAACTGCCGCCAATACAAATGTTATACGTTCCGCTGTTAATGGTCGTACGGTCAGCTCATCAGCTGAGGTAACAAgtcctgctgctgctgctactaaTTTAGTAGCAGCCCATTTGTCGGCCTCTGCCTCATTGTCAGCCaCATTTTTTGATGCCGATTTTTTTACGGAGGGGCGAGAATGTGTCAATTGTGGTGCAATTTCAACTCCACTATGGCGACGTGATAATACCGGACATTATTTATGCAATGCGTGCGGTCTTTATCATAAAATGAACGGAATGAATCGTCCCTTAATTAAACCACCCAGAAGATTGagtGCCTCTAGAAGGGCTGGTTTGACTTGCTCCAATTGTTTGACTACCCAAACTTCTTTATGGCGTCGTAATCCCAATGGTGAACCGGTGTGTAATGCCTGTGGTCTCTATTACAAGCTGCATAGTGTTAAACGTCCCTTAACCATGAAAAAGGATACAATAcagACTCGCAAACGTAAACCCAAAGGCTGTAAAGccgaaaaattatcgaaaaagcAAGCTGCCGCAAATGCAGCTCTTGCTGCGGCGTCTGAACAATCTATAAATGCCTCAAATAATACTCTCAATACTAGCACAGAAAGTGCCAACTTGAGCCTGCTCAATGGCGATCATGcaacagcaagcggaacaacaacaattaatgaATACAACCACACCACAGCAACATACAACGAATACGCTAATGAATCCTCATTCacccagcagcagcaacaacaacaccacaTCACCAACAGCAGCAGCTGCCAACAAATGTGCAActcccaacaacaacaacaattcacagacacaacaacaacagcagcaacaacaatatctaCAGCAACAATTAcaccaacatcatcatcatcaacagcagcaacaactatTAACAGCCAACAATCCTCATGGTCACCCAACCAATCTACATATGGGATCTAA
- Protein Sequence
- MKCANNRNLPLTSKVAKTKNRVNTNSSSSNNSLLTNAANMKITKAIVNSKQNRKLTNKGLTSLTTTTASQSLLNNLQQYQTQQQQQTNYERENEIQDKGSKESFFNTKQEQLTNCLNNVGLQKEIECEKEGRSSLQQQQTPLNSIATTTTANTTLINTINSDIQRNTTTRRNSPTPEQQQQGITITEREQQATTTTTATTSVVHNEFLGSATATTATITTTPTTNLNLSSLAAKAPQFISVVNETSNQTVLRTSATNINEVQNTQNLKNDEQTPKINTIITTTAASPTTITNNNLATTVANINDEAKDHYHNKKFSNTNINEQKLENSHKNYTNNNNNNNNKSDVSESVNNNNKNNNNDNNSVETLANQQKLINNTNSDNNTNKTVINRVITTTTTATTSAATPTNSLENLNDNNTTTTATNNAKNLLNNNNNNNTAPQNYRGANNSVIITNYNSNNNNNNNTNSQIPQSSLYTTSEYIATDNILNASSNDPNLNLAVIGSTAHLTSQQPSPLTGAQLQAQLPQHHPSNTEHWLNSYNSCAYDLSLNHTPSNGDNTNKDLINLQLFSPLAQLHHTAAHHNPHHSASTAYFTSSGHLINPANSSSVTPSTTNYLHDDNMRSNLGLYTTTYNPHHELVHHHHHPLMGVQNVSASAHTPTSIDEVIQDTLKDECLEDHHTGVSYLTLSSSVDVQSLKDSYHSANLTELTHLPSIAPAHLQSSSPHHHLQSIHHLHHNNSASSGAESPSPSSALSQSGDMATLQSFTQLTNASAAGHRDIYTMLTGPDQSQLFNFTSPPSPGLSNSSVYAAPLLASAANGMQYGMQSTASASTPPPTASQHHSSGSGVATTSSQSNHTTAGALTTNSNNNNLNETNSHSDDYGSPKSTQSNGAGGGGGTLPAFQRIATTSYNQNTHASAVDRYGSLTNYRTHNDTWSSPYEAISYAPSSVVGNQALNNVLTAANTNVIRSAVNGRTVSSSAEVTSPAAAATNLVAAHLSASASLSATFFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKPPRRLSASRRAGLTCSNCLTTQTSLWRRNPNGEPVCNACGLYYKLHSVKRPLTMKKDTIQTRKRKPKGCKAEKLSKKQAAANAALAAASEQSINASNNTLNTSTESANLSLLNGDHATASGTTTINEYNHTTATYNEYANESSFTQQQQQQHHITNSSSCQQMCNSQQQQQFTDTTTTAATTISTATITPTSSSSTAATTINSQQSSWSPNQSTYGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921763; iTF_00922579;
- 90% Identity
- -
- 80% Identity
- -