Lcup012902.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- gata4
- Assembly
- GCA_001187945.1
- Location
- JRES01001605.1:749899-770194[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-17 1.1e-13 50.2 3.7 1 34 1021 1053 1021 1055 0.97 2 2 9.7e-20 2.3e-16 58.8 4.4 1 36 1075 1109 1075 1109 0.97
Sequence Information
- Coding Sequence
- atgaaATGTGCCAATAATCGTAATTTACCATTAACCTCTAAagtagttaaaaacaaaaatcgtgTTAATACTAATAGCAGCAATAATTCGTTATTAACAAATGCTGCCAATATGAAAATCACCAAAGCTATAgcaaattctaaacaaaatcgtaaattaacaaataaaggaTTAACTTcattgacaacaacaacaacagcagcaagtCAGTCATTATTAAATAATCTACAACAATACCAACAAACaccacagcagcagcaacaacaacaacagcaaacgaTCTATGAGAGAGAAAATGAAATACAAGATAAAGGAACAAAAGAAtcctttttaaatacaaaacaagaacaattaacaaattgcttaaataatgTAGGGTTACAGAAAGAGACGGACAGTGGTAAAGAGCACAGAACATccctacaacaacagcaaacaacgTTACACTCAACAGCCACAACAATAGCAAACACTACCctcaaaaatacaataaattcgGATATacaaagaaatacaacaacaaggAGAAATTCACCAACACCAGaccgacaacaacaacaaggaatAACAATAACAGAAAGAGAGCAACAGGCAACAACTGCTACTACCAGCGTACACAATGAGTTTTTAGGTTCTGCAACGGCgacgacaacaacaaccaccACCACACCAACTACGAATTTGAATTTATCGTCTTTGGCTCCTAAGGCACCACACTTCATATCAGTTGTCAACGAAACATCAAACCAAACAGTGTTACGTACATCAGCGACGAACATAAACGAAgttcaaaatatacaaaatttcaaaaacgacGAACAGACACCAAAGATAAACACAATTATAACCgcaacaacgacaacagcaGCGTCCCCAACAACGATAACGAATAATTTAGCAACAACAGTCGCTAACATAAATGACGAAGCAAAAGATCattatcataataaaaaattcacaaattcgaatataaattgtttgaaatcTCCCTCGAATATAAATGAgcaaacaatagaaaattgtcataaaaattatacaaataataacaataataataaaagtgacGTTTCAGAAAgtgttaataacaataataaaaataatgataataacaGTGTTGAAACGTTAGCcaatcagcaaaaattaattaataatactaatagtgataataatacaaataaaacagtGATAAATAgtgttataacaacaacaacagcagcagcagcaacacccacaaattcattagaaaatttaaatgatacaaacacaacaacagcagcagcaacaaataatgcaaaaaatcttttaaataacaCAGCTCCACAAAATTATCGTGGCGCTAATAATTCAGTGATAATAactaattacaataacaatcataacaacaacaaccacaataataatacaaattctCAAATTCCTCAAAGTTCTCTTTATACAACAAGTGAATATATAGCCACCGATAATATACTCAATGCCTCTAGCAATGATCCAAATTTAAATTTGGCAGTTATTGGTACTTCAACACATTTAACATCACAACAAACTTCACCCTTAACTGGAGCCCAATTGCAGGCTCAATTACCACAACATCACCCCTCTAATACGGAACATTGGTTAAATTCTTATAATTCCTGTGCCTATGATTTGTCTTTGAATCATACGCCCTCCAACGGAGATAATACGAACAAAGATTTAATAAATCTGCAGCTTTTTTCTCCTTTGGCACAATTACATCATACGGCGGCCCATCATAATCCACATCATTCAGCAAGTCCAGCCTATTTTACCAGTTCGGGTCATTTAATAAATCCTGCTAATAGCAGTAGCGTTACTCCTTCGAGCACTAATTATTTACACGACGACAATATGAGATCAAATCTGGGACTTTATACCACCACCTATAATCCTCATCACGAGATtgtacatcatcatcatcctctgATGGGTGTTCAGAATGTAAGTGCCTCTGCTCATACACCGTCCAGCATAGATGAGGTTATACAGGACACTTTAAAAGATGAATGTCTAGAAGATCATCATACTGGTGTTAGCTATTTAACACTCTCCAGCTCTGTCGATGTTCAATCCCTAAAGGATACCTATCATTCGACAAACTTAACCGAATTAACACATTTACCCTCAATTGCTCCCGCCCATATGCAGACCTCTTCGCCGCATCATCATTTACAGAGTATACATCATTTACATCATAATAATTCGGCCAGTTCGGGTGCAGATTCACCATCACCTTCATCGGCTTTATCGCAATCGGGTGATATGGCTACTTTGCAAAGTTTTACGCAGTTAACGAATGCCAGTGCTGCGGGTCATCGTGATATCTATACCATGTTGACGGGACCCGATCAATCGCAGCTCTTCAATTTCACCTCACCACCTTCACCGGGACTCACGAATAGTTCAGTGTATGCGGCACCTTTGCTAGCGTCAGCAACTAATGGCATGCAGTATGGTATGCAGTCAACAGCCTCAGCATCAACACCACCGCCAGCATCATCACAACATCACAGCTCTGGCTCAGGTGTAGCCACAACATCTAGTCATAGTAATCATACCACGTCGGTCCTAACAACTAATTCCAACAATAGCAATAATCTTAATGAAACAAATTCTCATTCGGATGACTATGGTTCACCCAAAAGTACACAAAgtaatggtggtggtggtggtggtggtactTTGCCAGCATTCCAGCGTATAGCTACTACTTCCTACAACCAAAGTACACATGCTTCAGGCATTGATCGTTATGGCTCCTTGACTAATTATAGAACTCATaacgATACTTGGTCTAGTCCTTATGAGGCCATTAGTTATGCTCCCTCTTCGGTGGTGGGTAATCAAGCTTTGAATAATGTCCTAACTGCCGCCAATACAAATGTTATACGTTCCGCTGTTAATGGTCGTACGGTCAACTCAACAGCCGATGTAACAAATCCTTCGGCTGCTGCTGCTACAAATTTAGTAGCAGCTCATTTGTCGGCCTCTGCCTCATTGTCAGCaaCATTTTTTGATGCCGATTTTTTTACGGAGGGGCGAGAATGTGTCAATTGTGGTGCAATTTCAACTCCACTATGGCGACGTGATAATACCGGACATTATTTATGCAATGCGTGCGGTCTTTATCATAAAATGAACGGAATGAATCGTCCCTTAATTAAACCACCCAGAAGATTGagtGCCTCTAGAAGAGCTGGTTTGACTTGTTCCAATTGTTTGACTACACAAACTTCTCTATGGCGTCGTAATCCCAATGGTGAACCGGTGTGTAATGCCTGTGGTCTATACTACAAGCTACATAGTGTTAAACGTCCCTTAACCATGAAAAAGGATACAATTCAGACTCGCAAACGTAAACCCAAAGGCTGCAAAGCAGAAAAGTTATCAAAAAAGCAAGCTGCCGCTAATGCAGCTCTGGCTGCTGCATCTGAACAATCTATTAATGCATCAAATAATACTCTTAATACAAGCACAGAGAGTGCCAACTTAAGCCTGCTGAATGGCGATCATGatattaaaccTTTAACACAACAATTATTAAATGCATCAACATCATCACTAACACAATCGGCGGCTACATCACCCACAAATAGTATATCATCGCCTTgtcataataacaataataataacaacaataatcacAGCATGAATATGTCACCAACATCACCGttaatgcaacaacaacaacagcagcagcaaacacAACAGCTTAATAATATGGGTAATATGTCACCACAACAAtatcagcaacaacatcagcagcagcaacaaatgtCACCAATAATGTTTcaacatcagcatcatcatcaagCCTCATCTGCCTCTTCATCACCCTCtaatcatttaaattctaataacaataataacaatacaacaacatttaatcataatgataatgaaaatttgaaatttatgcaaaaatatatacaacagcaacagcaagcGGAACAACAATTAATGAATACAACCAACACACCACAACAACATACCACGAATACGCTAATGAATCCACATTCacccagcaacaacaacaacaccacatcaccaacagcagcagcagccaaCAAATGTGCAACtcccaacagcaacaacaacaacaattctcagacacaacaacaacagcagcagcaacaatatctACAGCAACAATTAcaccaacatcatcatcaacagcagcaacaactattAACAACCAACAATCCTCATGGTCACCCAGCCAATCTACATATGGGATCTAATCATCATAGTCCTTTAAATGCCTATCACCACGAACCACAAACCAACTCACCACCCACCTCTCCTGTCTATGAAGCTTATGGTGAATTATTACCTCCAGCGAATGATCCTAATAACAGCATTAAAATCGAACAATTACATCAACATTTAGCTGaagagcaacaacagcagcaaaaccagcaacaacaacagcaaatctTACACAGCCATTTAAATAATATGAGCCGCAGTCCCTCCATGGATGATGATTATGAATATCATCAATTTTTACTACAACGTCAGCAACATTTACACGatttgcaacagcaacaattctTGCAATTTGTACCTCAACATTTGCATGATTTCAGTCGAAAATTCGATAGAGAGACAGTTGTGAAAAtggaataa
- Protein Sequence
- MKCANNRNLPLTSKVVKNKNRVNTNSSNNSLLTNAANMKITKAIANSKQNRKLTNKGLTSLTTTTTAASQSLLNNLQQYQQTPQQQQQQQQQTIYERENEIQDKGTKESFLNTKQEQLTNCLNNVGLQKETDSGKEHRTSLQQQQTTLHSTATTIANTTLKNTINSDIQRNTTTRRNSPTPDRQQQQGITITEREQQATTATTSVHNEFLGSATATTTTTTTTPTTNLNLSSLAPKAPHFISVVNETSNQTVLRTSATNINEVQNIQNFKNDEQTPKINTIITATTTTAASPTTITNNLATTVANINDEAKDHYHNKKFTNSNINCLKSPSNINEQTIENCHKNYTNNNNNNKSDVSESVNNNNKNNDNNSVETLANQQKLINNTNSDNNTNKTVINSVITTTTAAAATPTNSLENLNDTNTTTAAATNNAKNLLNNTAPQNYRGANNSVIITNYNNNHNNNNHNNNTNSQIPQSSLYTTSEYIATDNILNASSNDPNLNLAVIGTSTHLTSQQTSPLTGAQLQAQLPQHHPSNTEHWLNSYNSCAYDLSLNHTPSNGDNTNKDLINLQLFSPLAQLHHTAAHHNPHHSASPAYFTSSGHLINPANSSSVTPSSTNYLHDDNMRSNLGLYTTTYNPHHEIVHHHHPLMGVQNVSASAHTPSSIDEVIQDTLKDECLEDHHTGVSYLTLSSSVDVQSLKDTYHSTNLTELTHLPSIAPAHMQTSSPHHHLQSIHHLHHNNSASSGADSPSPSSALSQSGDMATLQSFTQLTNASAAGHRDIYTMLTGPDQSQLFNFTSPPSPGLTNSSVYAAPLLASATNGMQYGMQSTASASTPPPASSQHHSSGSGVATTSSHSNHTTSVLTTNSNNSNNLNETNSHSDDYGSPKSTQSNGGGGGGGTLPAFQRIATTSYNQSTHASGIDRYGSLTNYRTHNDTWSSPYEAISYAPSSVVGNQALNNVLTAANTNVIRSAVNGRTVNSTADVTNPSAAAATNLVAAHLSASASLSATFFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKPPRRLSASRRAGLTCSNCLTTQTSLWRRNPNGEPVCNACGLYYKLHSVKRPLTMKKDTIQTRKRKPKGCKAEKLSKKQAAANAALAAASEQSINASNNTLNTSTESANLSLLNGDHDIKPLTQQLLNASTSSLTQSAATSPTNSISSPCHNNNNNNNNNHSMNMSPTSPLMQQQQQQQQTQQLNNMGNMSPQQYQQQHQQQQQMSPIMFQHQHHHQASSASSSPSNHLNSNNNNNNTTTFNHNDNENLKFMQKYIQQQQQAEQQLMNTTNTPQQHTTNTLMNPHSPSNNNNTTSPTAAAANKCATPNSNNNNNSQTQQQQQQQQYLQQQLHQHHHQQQQQLLTTNNPHGHPANLHMGSNHHSPLNAYHHEPQTNSPPTSPVYEAYGELLPPANDPNNSIKIEQLHQHLAEEQQQQQNQQQQQQILHSHLNNMSRSPSMDDDYEYHQFLLQRQQHLHDLQQQQFLQFVPQHLHDFSRKFDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922577;
- 90% Identity
- -
- 80% Identity
- -