Basic Information

Insect: Lucilia sericata
Gene Symbol: -
Assembly: GCA_015586225.1
Location: NW:16027-23286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.17 7.8 6.9 0.8 1 23 288 311 288 311 0.93

2 13 0.013 0.59 10.4 1.2 2 23 392 414 391 414 0.95

3 13 2.3e-06 0.00011 22.2 1.5 2 23 1020 1041 1019 1041 0.97

4 13 0.00013 0.006 16.7 2.9 1 23 1047 1069 1047 1069 0.97

5 13 9.7e-06 0.00045 20.2 3.3 1 23 1077 1099 1077 1099 0.99

6 13 0.053 2.5 8.4 0.1 1 23 1105 1128 1105 1128 0.97

7 13 0.011 0.51 10.6 5.5 1 23 1300 1322 1300 1322 0.98

8 13 0.0061 0.29 11.4 0.9 1 23 1328 1350 1328 1350 0.96

9 13 0.0065 0.3 11.3 6.8 1 23 1356 1378 1356 1378 0.98

10 13 3.1e-07 1.4e-05 24.9 0.2 1 23 1384 1406 1384 1406 0.99

11 13 0.00043 0.02 15.0 5.0 1 23 1412 1434 1412 1434 0.98

12 13 3.2e-05 0.0015 18.6 3.8 1 23 1442 1464 1442 1464 0.99

13 13 5.4e-05 0.0025 17.9 0.4 1 23 1470 1493 1470 1493 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.17	7.8	6.9	0.8	1	23	288	311	288	311	0.93
2	13	0.013	0.59	10.4	1.2	2	23	392	414	391	414	0.95
3	13	2.3e-06	0.00011	22.2	1.5	2	23	1020	1041	1019	1041	0.97
4	13	0.00013	0.006	16.7	2.9	1	23	1047	1069	1047	1069	0.97
5	13	9.7e-06	0.00045	20.2	3.3	1	23	1077	1099	1077	1099	0.99
6	13	0.053	2.5	8.4	0.1	1	23	1105	1128	1105	1128	0.97
7	13	0.011	0.51	10.6	5.5	1	23	1300	1322	1300	1322	0.98
8	13	0.0061	0.29	11.4	0.9	1	23	1328	1350	1328	1350	0.96
9	13	0.0065	0.3	11.3	6.8	1	23	1356	1378	1356	1378	0.98
10	13	3.1e-07	1.4e-05	24.9	0.2	1	23	1384	1406	1384	1406	0.99
11	13	0.00043	0.02	15.0	5.0	1	23	1412	1434	1412	1434	0.98
12	13	3.2e-05	0.0015	18.6	3.8	1	23	1442	1464	1442	1464	0.99
13	13	5.4e-05	0.0025	17.9	0.4	1	23	1470	1493	1470	1493	0.97

Sequence Information

Coding Sequence: ATGAAATCTCAAGTTAACAAAATGATCAACACTTTATTGGAGCATGTGCCCATTAAAATGGAAGTTACTGAAGTGGAGGAAGAGGAGGTCAATGAGAGACCAGCTAAAGACTTGAAGGCAGTAGAAATGGCTAAAGAAGATGAGGATATAAATGAGACAGATGAAGATTTGGATGATGAGGATGAAGATGATGAAGAAGACGATGAGGATGACGAAGAAGATGAGGATGAAGAAGAAGAGGAGTCTGATACCGAAACCGATGCCTTAGAAATTGAGCAAGAAGCCACCATGTTAATAAGCAGTGATGAAGAAGCTGAATTGGAAGCCCAAAGAATACGCTTCCCGGACAAAATCGAAGGCAAGAAATCCAGACGCGATTCCTTAAAAACATCACGCAGTTCTTCCAGGAATAGCCAAAATAGTAATAGCTCTTCCACTAAATCTGTTAACAAACTAAAAAACACAGATGAAAACAACAAAGAGGAAACTCAACAGAAACAAAGAATTTCACCTCGCCTCAAGCTGGCAGAGAACACTTTAGCAGCCGAAAACTTACAAAAAGAGCcacacaataacaacaacaacaacactaacaCTATAACAGAAAAGAAAACGCAAAATAAATTACAGGAAaataatgacaaaaacaataaaccCCCTACAGCGGAAGAAATCAGCAAAACATTGGAGCTCAATAAAGTAAATTCCAGCCAACCTGTAACACTCTCCATTCCTCCAGCCAAAAGTCGCCGTGGTAGTAATAACTCCACCTGTAGTCTAGCTTCCACTATAGGCTCTGATACTTCGGAAACAGAATCCTGTGGCAATATATACGTTTTCAATCTACAACAAAAACTCATATTCAATTGTGAGTTCTGTGATCTGAAATATGGTGATTTGGAAAACTTTGGTCGACATCTCCATGAGGCCCATAAACTCTTCCATTTCGATGAAGATCCTGAAAAGGAAAATGCCCCGCGTAATGTACGTAAAAGCAATCGTAATAATGCGCCAAAAGTAAACACCACCTCTATCAAGAAAGAACCTCTACAATGTTTTGATTCAACAACTATGGCGCCAGAACCACCTGTTGCCTTGCCTCTATCCGTTTTAGCCGAACCACTAGAATCGTGTGGCAATGTTTTCATGCTGAATCATCGTAAATTGTTTTTAGTCTGTGGCTATTGTGAGTGTAAATATGCGAATTTGGATTTGTTTGAGAAACATTTGCGTCAACAGCATCGCATTTTTGAGGGTTGTCGCAATGAGTTGAATGTGGTGCCTAAAGTGGAGATAAAACAAGAAATGTTTGTTATTAGTGATGTGGTGGGTGGTCAATCAAGTCGTGCTGCTCCTCAGGCTATGGTTTCCATACCAGCAGAAATTCCTTTAGATATTAGCATATCTCCAGAAAATGAGGCTGCCACTTTAGCTGCTTTAGATGAAACTTTGGATATGGAAGATATTAACCCGGAACAGCCTACTACTTCAACTTTAACTTCTAGCAGTTCTTTGGCTGCTAAAATAGGTGCTGATTCGATGGAGGCAATTATTACAAATGATAATTTCAATTCTAATGAAAATGACACGGATATTCCAACAACTGTTGCTCCTAAGAAAACCAGAAATAAAAGACGCACTTCACCCTTAAAACCTTTAGTTTCACCTAATAAAAGACCGAAAAGAAATACCAGGAATACTGCCAAAGTTCAGGAGGAGCCCAACCCTACAGTTGTAAATATCTCGGAAAGAATCGTTCCTGCAGGAACAACTCAAGTTATGGAAACTGTAAATATCATTGAAGCTGTAAAAACTATAGATAATGAAGACAACAAATCAGCCAGCAGCAATCAAGAAATTACAGTATCTAGGGAATccgaaaacataataaaaatgcCTGAAATTAATGAAACAATTCCGCCAAAAACTACAGAAACTAAAGTAAGCAAGAAACGCACAAAATCCACAGAATCAAAAAGAACAGCATCTCCAGAAGCAATAGAAATTAAGAAATCTACAAAATCAACGGAATCTAATAAGGAAACTGCGACAGAAACTGAAGAACTCAAGGAACCTACAAAATCTACTGAATTGAGGAAAACACCTTCTATAGAAACTACAGAGGTCAAGAAACTTACTAAGACAATAGAAATTAAGAAATCCACATCTCCAGAAACAATAGAAACCAAGAAAACTGCAAAAACCGCACAAAATAAAGCTGCAACTGTTGTGGATACGACAAAACATAAGGAAAATAAGAAAGCGACAAAAGCTGCAGAAGCCAAGAAACCAGCAGAATCGGTAGAACCAGCTGAAAGTAAAGAAACCACAAAAACAAATGAAGCAATAGCTGTGGTTAATGAGGTATCTACAGAGTGCTCTCTATTGACAAAGTCTAACGAAACAAAGCGACCAACAACTCCTGCAGAAACTGCAGGAAATAAAAAGGCAAGAAAAACAATTAAGGCACAAGAAACCAAGAAACCAGTAATACAAGAAATGCAAGAAACAGTAGAAACGAAAGAATCAAGGAAACTTGCGAAAACAGAAGCTACAGCAAAGGTAGAAGTCAAAACAACGACAAAATTGCAAGAATCTAATGAGGAAGCAACTGCTGTAGAGTGCACAGCAACCAAAGCCAGAAGAAAATCAACAAGAGCGGTGGATTTAAATAAACCAGCAACACCAGAACCAGTAGAAGTTGTTGAAAACCAAAAACCTACAAAATCAGAAGCAGCAACAACGCAAGAAACAAAAAGAGCTAGGAAAGCAATAAAAGTTGTAGAAGCTGAAGAGGAACCTGTACAAGAACCTGCAGTAGAAACTGTAGAAACAAAGAAACCTACAAACTCAGAACCGGCAACAACGCAAGAAACAAAAAGAGCtagaaaatcaataaaagtAGTAGAACCTATAGAGGAACCTATAACAACACAGGAACCGGCAGCAACTAAAGAAACCAGCAGAAAGTCTAGCAAACCGgcagaaattaaaaaacttaccaAACAGGAAGTAACTGAAACCGAACTAGAGCCGGAAACTAGTGATAATGAAATGCAATGTGATGAATGCGATAAGAAATTTACACGAAGAGAAAGTTTAAAAATCCACAAGAGAGTACACACCGGCGAAAAACCCTTCCAGTGTGATATTTGTCAAAAAAGTTTCCGAGCCAAACAAAACCTGACCATGCACAAAAAGTTTCACATGGGAGAGGCTTCGAAAAACTTTGAATGTGAACATTGCGATAAAAAGTTTCTACGTAATACCGATCTTAAGGTGCATATGAGAACGCATACGGGTGAAAAGAAATTCAAATGTGGCATTTGTCTACAGGGTTATGCTTCCAAACTTAATGTCCAAACACACATTGAAAGAGACCATTTGCCAGAGGATGGTGTGGTGGGTAAACCGCCTAGAGGTAAAAAGAAATCAGGACCCAATTCTAAGGTTTTAAGAGAAGAATTggaatatcaaaagaaaataatacacGAACTGCAACAGGCTAAGATAGAGAAGGATATTAATAAAACTACTTTGGGTACAGCTCCAGCAGCAACAGCTCTTAGTGTAGAAAAGCAATTGCAGGCAGAAACCCTTCAttatcagcagcagcagcaggatACCGAAATGCAAGATCTTAATGCTGATCCTGTCAATGATATTATagaacaaatacaaaatgaaatacTTTTAGGCGAACAGCAAAGACAACCGGAAAATACACAAGTCAATGCCGTAACCTATATCATTAATACGATGTCTGAACCCAATGAAGTATTAAATCTAACAAATGATACAACTAACAAGACAACCCTTATACTAGAGCCACAGCCCAATGAATTATTAAATTCTCCTGAAGATATTAAACCCACTTTAATGCAGGTAGTTAAACGTTATTGCTGTGAACAGTGTAATCGCTCCTTTAAGAAACACATACGTCTGGTGGAACATCAACGCGTGCATACGGGTGAAAAACCTTTTGAATGTGATGAATGTGGCAAACAGTTTCGCATACGCATGCGTTTAAGTGAACACAAACTACGACATTCCAAGGAAAAGAAATTCAAATGTGAAGTCTGTAATCTGGGCTGTTGTACTAAACAGGATTTAAATCTACACATGCGTCATCATACCAATGACAGACGTTTCCAATGTTCCATGTGCCCCAAGGCATTTGTACGTAGTTCAGATTTGAAAATACACGTACGCGTTCACACCGGTGAGAAGCCCTTCGTTTGTGATATTTGTCACAAATGTTTCCGAGCCAATCAGAATCTAAGTGTTCACAAAAAATCTCATATGGGTGATGCTTCCAAAACCTATCAATGTGAACATTGTGATAAGAAATTTATGCGTAATATTGATCGTAAAGTTCACATGAGAACTCATACTGGAGAAAAGCCTTATAAATGTGAGATATGTCAACGTGGTTACTCTTCTAGATATAATGTACGCGCTCATATAGAAAGAGATCATATATCGCCTCATGGCGTTGGATCGCCACCTAAAAAAAAGCGTCCTGGACCTAAACCTAAAGGTTTAAAGGCTGAAttggaaaaacaaaagaaacttaTAGAGGAACTACAAAATCAACtattacaacaaattaaaactGATGAAAAAATCATTAACTGTGAAGAGGAAATCTTACCCCATGATACTCTACAAGATAGCACCATAACGGCTTCCACACCTTTAATCAGCAGCTCCAACATAAGCCATGATCCCATACAAAGTGCTTATGATTTACTAAATAAACTCAAATCGGCCTCAACTACCTCTAAACCTTTAACTATAATACCCTCTCCACCACCTCTAAAGGACATTGGCTCTAATCCCTTTACCAAAGCCAAAAGGCCGCCACTTCCACATTACTACCTCTTACtataa
Protein Sequence: MKSQVNKMINTLLEHVPIKMEVTEVEEEEVNERPAKDLKAVEMAKEDEDINETDEDLDDEDEDDEEDDEDDEEDEDEEEEESDTETDALEIEQEATMLISSDEEAELEAQRIRFPDKIEGKKSRRDSLKTSRSSSRNSQNSNSSSTKSVNKLKNTDENNKEETQQKQRISPRLKLAENTLAAENLQKEPHNNNNNNTNTITEKKTQNKLQENNDKNNKPPTAEEISKTLELNKVNSSQPVTLSIPPAKSRRGSNNSTCSLASTIGSDTSETESCGNIYVFNLQQKLIFNCEFCDLKYGDLENFGRHLHEAHKLFHFDEDPEKENAPRNVRKSNRNNAPKVNTTSIKKEPLQCFDSTTMAPEPPVALPLSVLAEPLESCGNVFMLNHRKLFLVCGYCECKYANLDLFEKHLRQQHRIFEGCRNELNVVPKVEIKQEMFVISDVVGGQSSRAAPQAMVSIPAEIPLDISISPENEAATLAALDETLDMEDINPEQPTTSTLTSSSSLAAKIGADSMEAIITNDNFNSNENDTDIPTTVAPKKTRNKRRTSPLKPLVSPNKRPKRNTRNTAKVQEEPNPTVVNISERIVPAGTTQVMETVNIIEAVKTIDNEDNKSASSNQEITVSRESENIIKMPEINETIPPKTTETKVSKKRTKSTESKRTASPEAIEIKKSTKSTESNKETATETEELKEPTKSTELRKTPSIETTEVKKLTKTIEIKKSTSPETIETKKTAKTAQNKAATVVDTTKHKENKKATKAAEAKKPAESVEPAESKETTKTNEAIAVVNEVSTECSLLTKSNETKRPTTPAETAGNKKARKTIKAQETKKPVIQEMQETVETKESRKLAKTEATAKVEVKTTTKLQESNEEATAVECTATKARRKSTRAVDLNKPATPEPVEVVENQKPTKSEAATTQETKRARKAIKVVEAEEEPVQEPAVETVETKKPTNSEPATTQETKRARKSIKVVEPIEEPITTQEPAATKETSRKSSKPAEIKKLTKQEVTETELEPETSDNEMQCDECDKKFTRRESLKIHKRVHTGEKPFQCDICQKSFRAKQNLTMHKKFHMGEASKNFECEHCDKKFLRNTDLKVHMRTHTGEKKFKCGICLQGYASKLNVQTHIERDHLPEDGVVGKPPRGKKKSGPNSKVLREELEYQKKIIHELQQAKIEKDINKTTLGTAPAATALSVEKQLQAETLHYQQQQQDTEMQDLNADPVNDIIEQIQNEILLGEQQRQPENTQVNAVTYIINTMSEPNEVLNLTNDTTNKTTLILEPQPNELLNSPEDIKPTLMQVVKRYCCEQCNRSFKKHIRLVEHQRVHTGEKPFECDECGKQFRIRMRLSEHKLRHSKEKKFKCEVCNLGCCTKQDLNLHMRHHTNDRRFQCSMCPKAFVRSSDLKIHVRVHTGEKPFVCDICHKCFRANQNLSVHKKSHMGDASKTYQCEHCDKKFMRNIDRKVHMRTHTGEKPYKCEICQRGYSSRYNVRAHIERDHISPHGVGSPPKKKRPGPKPKGLKAELEKQKKLIEELQNQLLQQIKTDEKIINCEEEILPHDTLQDSTITASTPLISSSNISHDPIQSAYDLLNKLKSASTTSKPLTIIPSPPPLKDIGSNPFTKAKRPPLPHYYLLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00921567;
90% Identity: -
80% Identity: -