Basic Information

Insect: Lucilia cuprina
Gene Symbol: -
Assembly: GCA_001187945.1
Location: JRES01000836.1:130601-140815[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 8.1 6.8 0.8 1 23 283 306 283 306 0.93

2 13 0.0092 0.62 10.3 1.2 2 23 387 409 386 409 0.95

3 13 1.7e-06 0.00011 22.1 1.5 2 23 991 1012 990 1012 0.97

4 13 9.4e-05 0.0063 16.6 2.9 1 23 1018 1040 1018 1040 0.97

5 13 7.1e-06 0.00047 20.1 3.3 1 23 1048 1070 1048 1070 0.99

6 13 0.039 2.6 8.4 0.1 1 23 1076 1099 1076 1099 0.97

7 13 0.0084 0.56 10.5 5.5 1 23 1270 1292 1270 1292 0.98

8 13 0.0045 0.3 11.3 0.9 1 23 1298 1320 1298 1320 0.96

9 13 0.0048 0.32 11.2 6.8 1 23 1326 1348 1326 1348 0.98

10 13 6.9e-08 4.6e-06 26.5 0.2 1 23 1354 1376 1354 1376 0.99

11 13 0.00032 0.021 14.9 5.0 1 23 1382 1404 1382 1404 0.98

12 13 2.3e-05 0.0016 18.5 3.8 1 23 1412 1434 1412 1434 0.99

13 13 4e-05 0.0027 17.8 0.4 1 23 1440 1463 1440 1463 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	8.1	6.8	0.8	1	23	283	306	283	306	0.93
2	13	0.0092	0.62	10.3	1.2	2	23	387	409	386	409	0.95
3	13	1.7e-06	0.00011	22.1	1.5	2	23	991	1012	990	1012	0.97
4	13	9.4e-05	0.0063	16.6	2.9	1	23	1018	1040	1018	1040	0.97
5	13	7.1e-06	0.00047	20.1	3.3	1	23	1048	1070	1048	1070	0.99
6	13	0.039	2.6	8.4	0.1	1	23	1076	1099	1076	1099	0.97
7	13	0.0084	0.56	10.5	5.5	1	23	1270	1292	1270	1292	0.98
8	13	0.0045	0.3	11.3	0.9	1	23	1298	1320	1298	1320	0.96
9	13	0.0048	0.32	11.2	6.8	1	23	1326	1348	1326	1348	0.98
10	13	6.9e-08	4.6e-06	26.5	0.2	1	23	1354	1376	1354	1376	0.99
11	13	0.00032	0.021	14.9	5.0	1	23	1382	1404	1382	1404	0.98
12	13	2.3e-05	0.0016	18.5	3.8	1	23	1412	1434	1412	1434	0.99
13	13	4e-05	0.0027	17.8	0.4	1	23	1440	1463	1440	1463	0.97

Sequence Information

Coding Sequence: ATGATCAACACTTTATTGGAGCATGTGCCCATTAAAATGGAAGTTACCGAAGTGGAGGAAGAAGAGGTCAATGAGAGACCAGCTAAAGACTTGAATGCAGGACAAATGGCTAAAGATGATGAGCATATAAATGAGACAGATGAAGATTTGGAAGATGAGGAGGACgatgaagaagatgatgatgaggagGAAGACGATGAAGAAGAGGAGTCTGATACCGAAACCGATGCCTTAGAAATTGAACAAGAAGCCACCATGTTAATAAGCAGTGATGAAGAAGCTGAATTGGAAGCCCAAAGAATACGTTTTCCAGACTTAGTCGAAGGCAAGAAAACCAGACGTGATTCCTTAAAAACATCACGCAGCTCTTCCAGGAATAGCCAAACTAGTAATAACTCTTCCATTAAATCGGTTAACAAACTAAAAACACCACATGAAAACAACAAAGAAGAAATCCAACAGAAACAAAGAATTTCACCTCGCCTCAAGCTGGTAGAGAATACTATAACAGCCGAAAACTTACAAAAAGAGCCACAcaataacaccaacaacaacaacagcaacagcagtagCACTAACACcataatagaaaagaaaatgcaaaataaattacaagaaaataatcaCAAAAACAATAGATCCCCTACGGCAGAAGAAATCAACAAAACATTAGAGCTTAATAAAGTAAATTCCAGCCAAACTGCAACACTCTCCATACCTCCAGCCAAAAGTCGACGTGGTAGTAATAACTCAACCTGTAGTATAGCTTCCACTGTTGGCTCTGATACCTCGGAAACCGAATCCTGTGGTAATATATACGTTTTTAATCTacaacaaaaactcatattcaattGTGAGTTTTGTGATTTGAAATATGGTGATTTGGAAAACTTTGGCCGACATCTGCATGAGGCCCATAAACTCTTTCACTTTGATGAAGATCCTGAAAAGGAAAATGCACCGCGTAATGTAcgtaaaagtaattgtaataatGCGGCAAAAACAAACATCACCTCCATCAAGAAAGAACCTCTACAATGTTTTGATTCAACAACAATGGCGCCAGAACCACCTGTTGCCTTGCCTCTATCCGTTTTGGCTGAGCCATTAGAATCGTGTGGCAATGTTTTTATGCTGAATCATCGTAAATTGTTTTTAGTCTGTGGCTATTGTGAGTGTAAATATGCGAATTTGGATTTGTTTGAGAAACATTTGCGTCAACAGCATCGTATTTTTGAGGGTTGTCGTAATGAGTTGAATGTGGTGCCTAAAGTGGAGATCAAACAGGAAATGTTTGTTATTAGTGAGGTGGTGGGCGGTAAAACAAGTCGTGCTGCTCCTCAGGCAATGGTTTCTATACCAGCAGAAATTCCTTTAAACATTAGCATATCTCCAGAAAATGAGGCTGCTACTTTAGCTGCTTTAGATGATACTCTAGATATGGAAGATATTAGCATGGAACAGCCTACTACTTCAACGTTAACTTCCAACAGTACTTTAGCTAACTCGATTGAGGCAATTATTACAAATGAAAATTCCAATTCTAATGAAAATGACAAGGATATTCAAACATCTGTTGCACCTAAGAAAGCCAGAAATAAAAGACGTTCTTCTCCTTTAAAACCTTTAGTTTCACCCAATAAAAGACCCAAAAGAAATACTAGAAATACCACTAAAGTTCAGGAGGAGGCCAACTCTACGGTTGTAAATATCCCGGAGAAAATCGTTCCTTTAGAAACAACTCAAACTATGGAAACAGAGAATACAATTGAAGCtgtaaaaactatagaaaatgaaGACAACAAATCAACCAGCAAAAATCAAGAATTCACAGCTTCTAAAGAATCCGAAAACATAATAAAAGTGTCTAAAAGTAATGAAACAATTCCGCCACAACCTACAgaaattaaagtaaacaaaaagcTTACAAAAGCCACGGAATCAAAAAGAACATTATCTCCAGAAGTAATAGAAGTTGAGAAATTTACAACGGAATCAAATAAAGAAACTGAGCCAGAAGCTGAAGAAAATAAGGAAGCTAAAAAATCTACAGAGAGGAGAAAAACACCTTCTATAGAAATGACTATAGATATTAAGAAATCCACATCTCCAGAAACAATAGAAACgaagaaaactacaaaaatagcACAAAATAAAGCTTCAACTGTTGTAGAATCAAAACAACCTAAGGAAAGTAAGAAAACGACAAAAGCTGCTGAAGCTAAAAAACCAAAAGAATCACTAGAACCATCTGAATGTAAAGAAACCACAAAAACAAATGCAGCAATAACTGTGGTTAATGACGAATCTAAAGAGTACAATCTATTGACAAAGTCTAACGAAACAAAACGACCAGAAACTCCTGCAGGCAATAAAAGGGGAAGAAAATCAATTAAGGCACAAGAAACCAAGAAACAAGTAATACAAGAAACACAAGAAACAATTGCTGAAGATAACAGGAAACATACGAAAACAGAGGCAACcgcagaaaacaaaacaacaacaaaaatacaagaATCTAATGCAGACACTACAGTTGTTGAAAATACAGCAACCAAAACTAGAAGAAAATCAACAAGAGCGTTAGATTTAGCTAAACCAGCAACACCGGAACCAGTAGCAATTGTTGAAAaccaaaaatctacaaaatcgGAAGCAGCAACAGCTCAAGAGACAAAAAGACCCAGAAAAGCAATAAAAGTTGTAGAAGCTGAAGAGAAACCTGTACAAGAACCTGCTGTTGACACAGAGAAACCTACAAAATCTGAAGCAACAACAGTGCAAGAAGCTAAAAGAGGTAGAAAATCGAAAGTTGTAGAAACTGAGGAGGAAACTATAACAGCACAGGAGCCACCGGCAGCAACTAAAGAAACCGGCAGAAAGTCTAACAAACCGACAGAAATTAAGAAACTTACCAAACAAGAAGTAACTGAAACCGAACTAGAGCCAGAAACTAGTGAAAATGAAATGCAATGTGATGAATGCGATAAGAAATTTACACGAAGAGAAAGTTTAAAAATCCACAAAAGAGTACACACTGGCGAAAAACCCTTCCAATGTGATATTTGTCAAAAAAGTTTCCGTGCCAAACAAAACCTAACCATGCACAAAAAGTTTCACATGGGAGAGGcttcgaaaaattttgaatgtgaACATTGCGATAAGAAGTTTCTACGTAATACCGACCTTAAGGTGCATATGAGAACGCATACGGGTGAAAAGAAATTCAAATGTGGCATTTGCTTACAGGGATATGCTTCCAAACTTAATGTACAGACGCATATAGAAAGAGACCATTTGCCAGAGGATGGTGTGGTGGGTAAACCGCCTAGAGGTAAAAAGAAATCAGGACCTAATTCTAAAGTTTTAAGAGAAGAATTGgaatatcaaaagaaaattatacatGAATTGCAACAGGCTAAGATAGAGAAGGatattaataaaactacttTGTGTGCAGCACCAATAGCTCTTAATGTAAGTGAACAATTGCAAACAGAAACACTACAttatcagcagcagcagccgGATAGTGAAATGCAAGATCTTAATGCTGATCCTGTCAATGATATTATAgaacaaatacaaaatgaaatacttTTAGGAGAACAACAGCAAACGCAACAAGAAACTGCACAAGTTAATGCCGTAACCTATATCATTAACACAATGTCTGAACCGAATGAAGTATTAAATCTAACAAATGATACAACTAAGAATACAACCCTTATACTAGAGACACAGTCCAATGAATTACTTAATTCCCCAGAAGATATTAAACCCACTTTAATGCAGGTTGTTAAACGCTACTGCTGTGATCAGTGTAATCGCAGTTTTAAGAAACACATACGTCTGGTGGAACATCAACGTGTGCATACGGGTGAAAAACCTTTTGAATGTGATGAATGTGGTAAACAGTTTCGCATACGCATGCGTTTAAGTGAACACAAGCTACGACattccaaagaaaagaaattcaaaTGTGAAGTCTGTAATCTGGGATGTTGCACTAAACAGGATTTAAATCTACACATGCGTCATCATACAAATGATAGACGTTTTCAATGTTCCATGTGCCCCAAGGCATTTGTACGTAGTTCTGATTTGAAAATACACATACGCGTCCACACCGGTGAGAAGCCTTTTGTTTGTGATATTTGTCACAAATGTTTCCGAGCCAATCAAAATCTTAGTGTTCACAAAAAATCACATATGGGTGATGCTTCCAAAACCTATCAGTGTGAACATTGTGATAAGAAATTTATGCGTAATATTGATCGTAAAGTTCACATGAGAACTCATACTGGAGAAAAACCTTATAAATGTGAGATTTGTCAACGTGGTTACTCTTCTCGTTACAATGTACGAGCTCATATAGAAAGAGATCATATATCTGCCCATAACGTAGGATCGCCACCGAAAAGTAAAAAACGTCCTGGACCTAAACCTAAAGGTTTAAAGGCtgaattagaaaaacaaaagaaacttatAGAGGAATTACAAAATCAACtcttacaacaaattaaaactgATGAGAAAATCATTAACTGTGAAGAGGAAATCTTACCTCATGATACTCTACAAGATAGCACCATAACGGCGTCTACACCTCTAATCAATAGCTCGAGTATAAGTCATGATCCCATACAAAGTGCTTATGATTTACTAAATAAACTCAAATCGGCCTCAACTACCTCTAAACCTTTAACTCTAATACCCTCTCCACCACCTTTAAAGGACATTGGCTCTAATCCCTTTACCAAAGCCAAAAAGGCTGCCACCTCTACATTACTACCTCTAACTATAACACAAAAAATTGAACAACATTCACCGGCTCCTTCCACAGCCTCTTCCAATACTTCATTATCATGTCTCAGTACACCCTCACCTCCTAAGACCACAGCTACTAAAGTAGTGTCACAAAAAACCTCTCTGGGTATACAACAAGTATCGGTGACAGTATCTATGCAAGTGGAAAATGTAACAACAGCCACTACTCCTACTACTCCCGAAAAAGAGAATGCAGGCATTTTGACAACAAGCACAACAAACGATGGTACACAAAcgacaacatcatcatcatcgacgTCTAGTgttaagaaagaaagaaaaataacaagttATTTTACGGTGGTGGGTCAAAAGGCAGATGTTTAG
Protein Sequence: MINTLLEHVPIKMEVTEVEEEEVNERPAKDLNAGQMAKDDEHINETDEDLEDEEDDEEDDDEEEDDEEEESDTETDALEIEQEATMLISSDEEAELEAQRIRFPDLVEGKKTRRDSLKTSRSSSRNSQTSNNSSIKSVNKLKTPHENNKEEIQQKQRISPRLKLVENTITAENLQKEPHNNTNNNNSNSSSTNTIIEKKMQNKLQENNHKNNRSPTAEEINKTLELNKVNSSQTATLSIPPAKSRRGSNNSTCSIASTVGSDTSETESCGNIYVFNLQQKLIFNCEFCDLKYGDLENFGRHLHEAHKLFHFDEDPEKENAPRNVRKSNCNNAAKTNITSIKKEPLQCFDSTTMAPEPPVALPLSVLAEPLESCGNVFMLNHRKLFLVCGYCECKYANLDLFEKHLRQQHRIFEGCRNELNVVPKVEIKQEMFVISEVVGGKTSRAAPQAMVSIPAEIPLNISISPENEAATLAALDDTLDMEDISMEQPTTSTLTSNSTLANSIEAIITNENSNSNENDKDIQTSVAPKKARNKRRSSPLKPLVSPNKRPKRNTRNTTKVQEEANSTVVNIPEKIVPLETTQTMETENTIEAVKTIENEDNKSTSKNQEFTASKESENIIKVSKSNETIPPQPTEIKVNKKLTKATESKRTLSPEVIEVEKFTTESNKETEPEAEENKEAKKSTERRKTPSIEMTIDIKKSTSPETIETKKTTKIAQNKASTVVESKQPKESKKTTKAAEAKKPKESLEPSECKETTKTNAAITVVNDESKEYNLLTKSNETKRPETPAGNKRGRKSIKAQETKKQVIQETQETIAEDNRKHTKTEATAENKTTTKIQESNADTTVVENTATKTRRKSTRALDLAKPATPEPVAIVENQKSTKSEAATAQETKRPRKAIKVVEAEEKPVQEPAVDTEKPTKSEATTVQEAKRGRKSKVVETEEETITAQEPPAATKETGRKSNKPTEIKKLTKQEVTETELEPETSENEMQCDECDKKFTRRESLKIHKRVHTGEKPFQCDICQKSFRAKQNLTMHKKFHMGEASKNFECEHCDKKFLRNTDLKVHMRTHTGEKKFKCGICLQGYASKLNVQTHIERDHLPEDGVVGKPPRGKKKSGPNSKVLREELEYQKKIIHELQQAKIEKDINKTTLCAAPIALNVSEQLQTETLHYQQQQPDSEMQDLNADPVNDIIEQIQNEILLGEQQQTQQETAQVNAVTYIINTMSEPNEVLNLTNDTTKNTTLILETQSNELLNSPEDIKPTLMQVVKRYCCDQCNRSFKKHIRLVEHQRVHTGEKPFECDECGKQFRIRMRLSEHKLRHSKEKKFKCEVCNLGCCTKQDLNLHMRHHTNDRRFQCSMCPKAFVRSSDLKIHIRVHTGEKPFVCDICHKCFRANQNLSVHKKSHMGDASKTYQCEHCDKKFMRNIDRKVHMRTHTGEKPYKCEICQRGYSSRYNVRAHIERDHISAHNVGSPPKSKKRPGPKPKGLKAELEKQKKLIEELQNQLLQQIKTDEKIINCEEEILPHDTLQDSTITASTPLINSSSISHDPIQSAYDLLNKLKSASTTSKPLTLIPSPPPLKDIGSNPFTKAKKAATSTLLPLTITQKIEQHSPAPSTASSNTSLSCLSTPSPPKTTATKVVSQKTSLGIQQVSVTVSMQVENVTTATTPTTPEKENAGILTTSTTNDGTQTTTSSSSTSSVKKERKITSYFTVVGQKADV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922295;
90% Identity: -
80% Identity: -