Basic Information

Insect: Lucilia sericata
Gene Symbol: lrrfip2
Assembly: GCA_015586225.1
Location: NW:152937-163707[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1 1.4e+04 -18.0 22.8 119 157 113 151 4 172 0.40

2 5 0.015 2.2e+02 0.6 8.1 14 81 176 247 170 270 0.76

3 5 0.11 1.6e+03 -2.2 2.1 26 75 295 344 285 363 0.56

4 5 8.8e-117 1.3e-112 375.7 26.8 1 299 378 674 378 675 0.93

5 5 0.074 1.1e+03 -1.6 3.7 220 245 703 728 678 749 0.47

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1	1.4e+04	-18.0	22.8	119	157	113	151	4	172	0.40
2	5	0.015	2.2e+02	0.6	8.1	14	81	176	247	170	270	0.76
3	5	0.11	1.6e+03	-2.2	2.1	26	75	295	344	285	363	0.56
4	5	8.8e-117	1.3e-112	375.7	26.8	1	299	378	674	378	675	0.93
5	5	0.074	1.1e+03	-1.6	3.7	220	245	703	728	678	749	0.47

Sequence Information

Coding Sequence: ATGTCAGTGGAACAAAAATTAACtgataaaaatgttgaaactacaaaaacaaatacaaattcgagtttaacaaaaactaataaaaagaataaaaacaacaataacaacagcaatagTAGTACTAGTAGTagtaaaaaattcattaaaaaagcattgaaaacctcaaaaactaaaaaaactacaactaatgtcaacaataataacaacagcaacaacaacactattATGAATAaccaaaacaacagcaacaacactattagcagtagcagcagcaacaacaatgttGAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACCGATTTAAAAGAACTTGACGACGATATTGAAAACAACGAAGAAATTTCCAAGAACAACAACTCCAATGACGAACtttcaaataaagatattgatGAATTAAAGGAAAAAGATGAAGTTGACAAAGAGTCAACAGAGCAAATGCAAAATTCCACAATAagtgataataacaacaatactaATGACAAAGAAGAGACAAACGAAGTAATACTAcaacaaaaagaacaacaacaggTGGAAGAATTATTATCTACACCAATTGATAACATTGATAAACAAAACGAAGAAAACAAACAACCAGAACAACAACAAGATGAAAACAATGAATTAGCCACGACAATGTCTGCGACTGCAAATAATACTATTAGCGAAAAAGGAAATAAAGATAATAATGAAATTgataaaaaccaacaacaactacagcaagAACCAGACTCTCCCATAGAAGAAGCTATAGAAGCAAAAGAATccaatgaaaatatatttttaaatgacaGCACAACAATAACTACTCCCGTGCAAATCTGTGAAAGTTCTATTGTTGAGGAACAGACAtcacataataataataataatgacaatACGATAACAACATCTCCTCCTCCAGACACAAAGTCTAAGCAAACAACTGAAGATGCAGTCGAGTCAACTGCAAGTGTTGTAACTAAAGAAAGTAGTTATAAAGAGCAAGACGATGATCATGATTTAAATAATGAAGAAGATTATGACAATGATGATGAGTATGCCGAACCGTATGATGAACTATTGGTACAATTCCTTGATGAAGCCAATCAGATTGCTGAGGCTAGATTAGCTGCCAGAAGGCATGCTCGAGCGGAAGCTCGTGAAATACGTATGCGAGAATTGGAAAGGCAGCAAAAAGAACAAGAATCTAATGCAGATCGTGCATTCGATATGCACTCAACCGTTACCGGCATTACACCACTGTCACACATGCGTCTGGGTTTAGGTAGTTCACCAGTTACTGGTCTACTAAATTCAACAAGAGGAAATTCAATGTCATCGAGACGCAGTAGTGAAGATTCACTAGAAGAGGAAGGCCGCAGTTTAAGAGACATACGTCATGAGTTAAAGGATGTCGAAGAACGATTTCGTAAGGCTATGATAGCGAATGCTCAGTTGGATAACGATCGTGCCTCACAAACGTATCAGATACAGTTGTTGAAAGACAAACTGGAAGATATGGAAGAATCATATTCACAATTACAGCGTGAATGTAAGGAAAAGACACGCGATTGTAATGCCTTGAAACGATCGTTGGATAAGCTAAGCGAAGAGCTTAAACTGGTACAGGGTCAGCTCAATGAGCGTGATACACTGATAGCAGAACAAGGCTTAGTTATTGTGGCTATAGAAAATGAAGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTGGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTTCGACTTAAGAAATTTAGCGAAGAGAAACAGCAGCTACAACACGAAGTCCAGCAGCTGCAGGAACAATTAGAAACGTATAAAAGTCAGGGCAAAGGTCGTGGTAAAGGCAATTCTTCAAATGGTCCCTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGAGAAGCTAATAAAATCATATCggattataaatataaattacaaaaagcagAACAGGAAATTGCTAGTCTTCAGTCGAGTTTAGCACGTTCCGAGACACAAGTTATACGTTATAAAAGTACAGCTGAAGCGGCTGAAAAAGCTGAAGCAGAACTTAAAATCGAAAGGAGGAAACTGCAAAGAGagaaTCGTGAGGCAATGGAAAAACTCGAAGAATTAGAAACATCAAATAATCATCTACTGAAACGTTTGGACAAATTAAAGAATGCCAAAAGTGCTTTGCTCAAGGATCTCTGA
Protein Sequence: MSVEQKLTDKNVETTKTNTNSSLTKTNKKNKNNNNNSNSSTSSSKKFIKKALKTSKTKKTTTNVNNNNNSNNNTIMNNQNNSNNTISSSSSNNNVEVANDEIIEELFDFSDTDLKELDDDIENNEEISKNNNSNDELSNKDIDELKEKDEVDKESTEQMQNSTISDNNNNTNDKEETNEVILQQKEQQQVEELLSTPIDNIDKQNEENKQPEQQQDENNELATTMSATANNTISEKGNKDNNEIDKNQQQLQQEPDSPIEEAIEAKESNENIFLNDSTTITTPVQICESSIVEEQTSHNNNNNDNTITTSPPPDTKSKQTTEDAVESTASVVTKESSYKEQDDDHDLNNEEDYDNDDEYAEPYDELLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRAFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQHEVQQLQEQLETYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -