Lcup013419.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- dmd-4
- Assembly
- GCA_001187945.1
- Location
- JRES01000301.1:625165-631875[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-24 5.3e-21 73.9 11.8 1 47 37 83 37 83 0.98 2 2 0.29 1.4e+03 -1.0 0.6 23 32 315 324 313 328 0.75
Sequence Information
- Coding Sequence
- ATGACCTCTAAAGAGTCGTCCACGACTTTGGTGGCTAAAAAGTCACGCAAATCTTTAAAATCATTGGTGGCGGTAGATTCGATTAATAATAAGTCAACGTCTACAAATCGTGTTCCGAAATGTGCTCGCTGTCGTAATCACGGCTGGATATCAGAGTTACGTGGTCATAAAAAACATTGTACTTATAAGAATTGTCGTTGTGCAAAGTGTGTGTTGATTTTCGAGCGTCAAAGGATAATGGCGGCTCAGGTAGCCCTTAAGCGTCAACAGGCTGTAGAAGATGCCATTGCATTACGTTTAGTGGCCACTAAAACCGGCCAACAAATGGACAGTCTGCCTCCTGGCAATATATTTGATTTGGCGGAAAATCTACAGGACATTAAACAAGCGAACAATTCCTTAAAACCAACACAACAAGAAACTGTCGAAGATTTAAGTTTACCCAGTAAACAAACGGAATCTTTACAGAAAAGTTCCTTAAATTCTAAAGTAGAAACTATTACCGCCTCCAGCTCAAGTTCTGCTACAACTACTCTTACTTCTTCCTCTAATGCTAAGGTTTCACAGAATGCCATTGATATGTTGGCTCAATTATTTCCTCAAAGAAAACGCACCGTTTtggaattagttttaaaaagatGTAATTCTGATTTGGTTAaggctattgaaaatatttcctCATCTTATAAGGATCATAGTGAAGATATAGATGTTGATGTGGAGCCATTAAAGAACGGCGGAAATAATGTTATGAAAAGTGCTTTTAAACCGGTTTATAGTTCGGGGAATAtgCATCCCAAACCTTTAACCCTTAGCAGTTCGTTATGTTCCACCGCTACTGCTTATCCCAAATGGTTTGTGCCTCTTACATTTCCCATTACTTTTCAGGGTCATTTGGCACCAGCTTTGCCACCTAACGCTAGTCTACCGCCCCTCGCCACACGTTGTACTTTGCCAAATTGTACGTGCTTAGAGGGTTATCAATTTAATTGTCCATAA
- Protein Sequence
- MTSKESSTTLVAKKSRKSLKSLVAVDSINNKSTSTNRVPKCARCRNHGWISELRGHKKHCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDSLPPGNIFDLAENLQDIKQANNSLKPTQQETVEDLSLPSKQTESLQKSSLNSKVETITASSSSSATTTLTSSSNAKVSQNAIDMLAQLFPQRKRTVLELVLKRCNSDLVKAIENISSSYKDHSEDIDVDVEPLKNGGNNVMKSAFKPVYSSGNMHPKPLTLSSSLCSTATAYPKWFVPLTFPITFQGHLAPALPPNASLPPLATRCTLPNCTCLEGYQFNCP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922127;
- 90% Identity
- iTF_00922127;
- 80% Identity
- -