Lcup009210.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- Nfat5
- Assembly
- GCA_001187945.1
- Location
- JRES01001065.1:958966-988420[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5 8.8e+03 -3.8 1.4 109 121 44 56 36 74 0.41 2 4 4 1.4e+04 -5.8 3.6 60 98 211 250 203 287 0.55 3 4 1.6e-36 5.8e-33 113.9 1.4 1 168 326 485 326 486 0.97 4 4 1.1 3.8e+03 -2.7 0.3 34 67 1074 1107 1064 1166 0.48
Sequence Information
- Coding Sequence
- atgttattaCAGATCGGTCCGGGTAAAATGGTGCCTGGTAAACGTTTTCCCATACGACCACATCCACCGCCCTGTGATAATTCAAATGATAGTGGTTTTGGTTTCGATCAACATCTTgaagtacaacaacaacaacagcagcagcaacaacatagCCACcagcatcaacagcagcagcaacagcaaaccAGTAGCCCCAATTCAAGTACAAATTTATCATCTTCCTCCAGTTCCCTgcctcatcatcatcaccatcatcaacaGAGTTCATCGTTACAAAATAGTCCCACATCactaaatacaacaacatcGTCCTCATCAGGCACAAGCCTACAACATTCACCACAACAACATTTGATCAGAGCTATACCTGCCTCAAGATCTAGGCCAGCTAAAAAATTACCCTTCTTAAATGATGACACTGAAAATACTGAATCCGAAGATGAAGATTTCTGTACCGATGATTCCGATGACAATTATGGTGGACGACATCgtaaaaatctcaaaataactaatcaacaaataatatcatcatcatcctcttcatcatcatcatcatcgtgtTCGTCTGCAACGTCACCTCATTCTGataaatatcatcatcatcagaatCATTCACATAATcaacatcataatcatcatcataatcatcatcatcatcacctgGGACATGGTATTAAACGTAAAAAGATTGAAACTATTGCGGTGGATTTGGATAATGATGATGCCTGCAGTGAAGATGCCTTCATACGTAAAATAGCCAGTGCTCAAATGCCGGTTGAAAGTTCAACCACAAATATGTCCGCTATTAACACCAGACCGGTACAGTTACATAATCAAAGCTCTCATATAGCTGCATCCACTAGCTCAAAATTTATTGCCGCCAGTGCTAGGGCTATGACCAGAGTGGCCCATAAAAGACAACCGGCCACCCCGCCAAATAGTGTGGCCACTTCATCAAATGGTCGCATACAATTGGAAATTGTTTCACAGCCAGAACAGCAACACAGAGCCagATATCAAACCGAAGGCAGTCGTGGTGCCGTTAAGGATCGCAGTGGTAATGGTTTTCCCATAGTACGTTTAGTGGGCTATAATAAGCCCACTTCTTTGCAAGTATTCATTGGCACCGACATTGGACGTGTTGCTCCACATATGTTCTATCAGGCCTGCAAGGTGGCGGGCAAAAACTCCACGCAATGTAATGAAAAGAAAGTCGATGGTACAGTGGTTatagaaattgattttaaaccAGAGCAAGATATGACCATAACATGTGATTGCGTGGGCATACTAAagGAACGCAATGTCGATGTTGAACATCGTTTTCCAGAACATCTTgcacaaaagaataaaaagaaatcaacaCGATGTCGCATGGTATTTCGCACACAATTAACACACGATGATGGCACCGTCGAAACACTACAAGTCTGTTCTAATCCCATTATATGCACTCAACCGCCGGGTGTAccagaaatttgcaaaaaatccCTTAACTCTTGCCCAGTCGATGGTGGTCTGGAATTATTTATAATCggtaaaaattttctcaaagatACACATGTGATATTTCAAGAAACCTATGAAAGTGTCAGTGGCAACAACGATGATGATCTGAAAACAGCAGCTGCATCAGCAAACGATATGTCAATTATAGGAGCTGGACTGTGGGAACAAACAGTGTTGCCCGACAAAGAATATTTACAGCAAACCCATCTAATATGCACTGTGCCACCGTATATacatcaaaatatattaaaacctGTCACTGTGCAAGTGGCAATTATTTCGAGCGGCAAAAAAAGTGAACCCCATACATTTGTTTATACGCCAAAGGGCACCTATACACCATTAGCGGCTGCAACTACGCTAAGTAGTACAAATACAATACACAGTAGCTTATCATCGGCCcaagATGGCACTTTTATGGATACCACACCTGCCGCAGCAGTGGCAGCGGCCTCCGGCTCGCTCTGGCCTACAACAGAAACTAAACATGAAATTGATGCTGACATGATGCCACCACCCATTACCACACAAATGCCCATGGTCGTGAGACGGCCATCTTTGAATACTACACAGCCATTGATAACGGAACAACAATTGGTGCATCTTAATGCTGTGGTGGCAGCTGAAGCTTTAAAAACTGAACTTTTAGATGAAACTTCACAAAACTCTTTGGCAGATGCTATACACTCACCCGAATCTGTGGTGGCTGCTTGCGGTGTGGGAGGACCTCAAAGTCCTACGGCTTTGCAATATCATTCACGTTATGGTCGCAAGACCAGCATGGATGCCATGATGTATGATAATAACAGTATGCAGGGTTTCCCTGTGGCCCCAGCGGCACCCACTACCACACCCATGGAAGTGGCTGTGGCAGCGGCCGTTGAAATGGCGGTTAAGAATGAAATTGCCAAAGCAGTGTCAGTGGCTAAAGTGGATAAATTTATAACAGATTTGGCCAAGTCGGCAAATGTGGCCGATGCCACGGATCCAGTGCCAGAACCTTCACTATTTGGTGTCACCAACAATGCTGCCATAGATCATGCTCTTACCGATATTTTGACTACACCACAAACAACAGCTGCAGCTGCTGCGGCGGCTGCTGCTGTAGTACTCGAGCGAAGTCTCTCAAATTCCTCGGCCAGTTCATCATCAGCTTCGGGTTCACCCTTGTCGGGCACTTCTCCTTCCAATTCACTTACCAGTCACAATTCACCCATAACACAAGATATTATCTTGAATTCCGAACCTTCTGTACAATTAACACCCTCCTTGCCGCTACAACAATTAATGCCTACCGGTTCAGCATCCTCGGTCAGCGTTAATCCTGAAGTAAGCCAGTCGACCGGTCTATCGACCGACATAATTATGAACCCCTCCGTCTCGCCTTCCACTATACTGTGTTCGGACAATGGGGCTGCCACAGCGGTGGTGCCGAATATTATGGCACCACATCAGGTCACCATGGCCAATTCCATACTCAACGATATTGCCATGCAAGCTCAACCCACACAACAAGATGCTGCTGTGGCAGCGTTGGCCTTAAGCAACATCATAATGACACCGCCCAGTGATACTACAGTTGCAGTGCCACCCACCCCTTCATCTATGCAACCCGAAGTTACCACCGCCACCTCGACGGCCGTTAGTAATATGATCATTAAAGCAGCAGCCGATTTTATATCCAATCAAGAACAACAGAcccaacatcatcatcattgtcacaGCAATCATCAAACGCATCAAtcacagcagcaacagcaaataaTGTCATCGCAGACTGTTAATGCGGATCCATTGTCGTGTAATCCTTTGAATTTGTTATTGAATCACTCGGATGTGTCACCCAATACACAGACCAATGTTACGGCCGCCAATGCTGTTAATGTCAATGAAAATGTGTCATCACAGTTTCCCGCCTTAGGCATaaCAACACCACCCCAAGAATCTCTGATTGTTGCACTGGCCACAGAAAATGCCCTACAGAAATCTGTAGCAGCGGCGGCTATAACCACCAACGGAGCCGTAGTTACCCAAGAAACACCAGCACCTCCCACACCCAATCTACATCCAGTGGCGGCGGCAGCAGTTGGAGCTGTAgcagctgctgcagcagcagctgTTGCTCCACTAGCACCAATACCCCAAGACTTGACCACTATGTCGGATCAGGATCTTTTAAGCTACATAAATCCCAGTACATTTGATCAAGtgtctttttttaattgcaGTCTAAGAGATGAGAATCACAGTAAtttgtactacaacaacaacaataataatcaaGAGGACCAATATCATCGTAATAATTGA
- Protein Sequence
- MLLQIGPGKMVPGKRFPIRPHPPPCDNSNDSGFGFDQHLEVQQQQQQQQQHSHQHQQQQQQQTSSPNSSTNLSSSSSSLPHHHHHHQQSSSLQNSPTSLNTTTSSSSGTSLQHSPQQHLIRAIPASRSRPAKKLPFLNDDTENTESEDEDFCTDDSDDNYGGRHRKNLKITNQQIISSSSSSSSSSSCSSATSPHSDKYHHHQNHSHNQHHNHHHNHHHHHLGHGIKRKKIETIAVDLDNDDACSEDAFIRKIASAQMPVESSTTNMSAINTRPVQLHNQSSHIAASTSSKFIAASARAMTRVAHKRQPATPPNSVATSSNGRIQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLVGYNKPTSLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTVVIEIDFKPEQDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTHDDGTVETLQVCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFLKDTHVIFQETYESVSGNNDDDLKTAAASANDMSIIGAGLWEQTVLPDKEYLQQTHLICTVPPYIHQNILKPVTVQVAIISSGKKSEPHTFVYTPKGTYTPLAAATTLSSTNTIHSSLSSAQDGTFMDTTPAAAVAAASGSLWPTTETKHEIDADMMPPPITTQMPMVVRRPSLNTTQPLITEQQLVHLNAVVAAEALKTELLDETSQNSLADAIHSPESVVAACGVGGPQSPTALQYHSRYGRKTSMDAMMYDNNSMQGFPVAPAAPTTTPMEVAVAAAVEMAVKNEIAKAVSVAKVDKFITDLAKSANVADATDPVPEPSLFGVTNNAAIDHALTDILTTPQTTAAAAAAAAAVVLERSLSNSSASSSSASGSPLSGTSPSNSLTSHNSPITQDIILNSEPSVQLTPSLPLQQLMPTGSASSVSVNPEVSQSTGLSTDIIMNPSVSPSTILCSDNGAATAVVPNIMAPHQVTMANSILNDIAMQAQPTQQDAAVAALALSNIIMTPPSDTTVAVPPTPSSMQPEVTTATSTAVSNMIIKAAADFISNQEQQTQHHHHCHSNHQTHQSQQQQQIMSSQTVNADPLSCNPLNLLLNHSDVSPNTQTNVTAANAVNVNENVSSQFPALGITTPPQESLIVALATENALQKSVAAAAITTNGAVVTQETPAPPTPNLHPVAAAAVGAVAAAAAAAVAPLAPIPQDLTTMSDQDLLSYINPSTFDQVSFFNCSLRDENHSNLYYNNNNNNQEDQYHRNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260768;
- 90% Identity
- iTF_00921874;
- 80% Identity
- -