Llun015308.1
Basic Information
- Insect
- Lordithon lunulatus
- Gene Symbol
- -
- Assembly
- GCA_963942505.1
- Location
- OZ012668.1:53318197-53320179[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.41 2.6e+03 -0.0 0.0 19 44 17 39 11 39 0.73 2 12 0.00025 1.6 10.3 0.3 17 44 64 88 54 88 0.86 3 12 0.057 3.6e+02 2.7 1.9 14 28 121 135 112 152 0.76 4 12 0.0025 16 7.0 1.3 13 44 159 187 152 187 0.87 5 12 0.15 9.3e+02 1.4 0.2 16 26 222 232 208 234 0.82 6 12 8.7e-09 5.5e-05 24.5 1.4 3 44 238 283 236 283 0.94 7 12 0.88 5.5e+03 -1.1 0.8 35 44 360 369 339 369 0.68 8 12 0.84 5.3e+03 -1.0 8.0 14 29 371 386 362 407 0.73 9 12 0.71 4.5e+03 -0.8 5.7 14 43 460 491 449 494 0.81 10 12 0.0098 61 5.2 1.2 5 31 508 535 505 541 0.73 11 12 0.017 1.1e+02 4.4 1.5 9 29 540 560 534 572 0.77 12 12 0.014 88 4.7 2.9 18 39 577 606 563 624 0.80
Sequence Information
- Coding Sequence
- ATGACAATATATGATAACCCAGAGAGTACAGCGACAGAAGATACAATATGCGTTATCTGCGAACAGACAAATGTAACACCCACTGATTTATTATACCACCTTGAAGAGTTCCATAAGATACCCTCGgagtatgtaaaaaatataacacgtgaGGAATTAATCGATTTAATCATCATCAATGATGATACCTCAACATGCACGTTCTGCGACCAGAAATTTTCGCGCCGCAGGAGCTTAATCAGACACATAAAGACAATACATAAAATCGAAAACGTTCTTCTCCATAAGTGCTACGAATGCAATATAGCATTTACTACTACAGGCGAGTACGAGTCGCATAACACAAACATACATCCCGGGGAGAACATGATGAATTGCAGAATATGCAACACGTATTTCGCATCGTATATTGCATTAAGGCGACACATCTCTAAACACACAGCTAGTGTTAAAAATGAGAATACAGACAATAATACTAAATATGTTATAGCCTGTTCAATCTGCCAACAAAAGTTTACACGGCGTTTATACCTGATTGGCCATTTAAAACGCATACATAAACTCAATAACATACCAAACTACTATTGTACAGAATGCAACATATCATTCCAACAACACGAAGAATTTAAATCACATAAGAATACGAAGCATTTAGGCCTTGATGTCATCACATGCTATATTTGTAATGCAACTCATAGCACATACGCTGCtttatacaaacattttcaaacaCATACTCAAGAGGATGGAACAAGTAATTCAATAGATTACAGAGTAACTTGTTTGATTTGCCGTCGGAAGTTTACACGAGCTCAGAATTTAATGCGGCATTTGAAAGCCTCACACAAAATTGAGGATGTTCCAGGATACAATTTCAAGAAGCGTAACATTACCTATGGACGCGAGGAAGAATTGTTACCACATAATAATACGGTACATTCCactaataaatTTAAATTAGAAGTTGATAGTGATTTACCAGTTGAAACTAATGAATACCCGATATTGGATGTAAAGGTTGAGAAGGAAACATTTGCATGCAGTGTGTGTAAAATTCGGTTTAAAAACCGTTTTAGTTTGAACACGCATATGAGACAAGCACATAATATAAAAGCTAGATACAGCTGTAACATTTGTGAGAAAAAGTATTTCAGGCTATATAATTTGCGTTTACATAAAATGAGCTCGCATTTTTTCAAATGTGATAGTTGTACCAGATGTTTTCCTACAAATGCAAGTTTATTGGAACACATGCAGAGTCATACCAACAACGTTGTTGATGAAGATAAAACAGACAAAAGTGGTAGTGTTGTCGATACTATTGAAGCATACTCCATACCTTTAATCAGTGAGAGTCCATTGGGAGAcaggaaaagtaaaaaatccaCTCTCTGTCACATTTGCGCTAAAACCTGTGCCACACCATCCGCCCTCAAGAGGCACATTGATCACCACAATAATATCCGTAAACACAAATGTGAAACTTGCGGGTTTCGTTTTACAGCGGCGGTTCAATTAAGAAACCACATGTTCACGCATTCGACTGATCGAACGTTTGCTTGTGAGGTTTGTGGCAAGACGTATCGCACGAAGCAAACGCTGAACTCGCACATGCTTTTCCATGACGATTCCACTTTGAGATTCACTTGCACAATCTGCAACAACAAATATAGGCGAAACGCCGACCTTAAAGCGCACAGCAGAGTGCATACGGGCGAAAGGCCGAAGATATGTAAGGTTTGTGGGGCGGCTTTTTCCAGAGGAATGGCCGAACACATGCGCACCCATAAAGACACCAATCCGTTCAAATGCCACCTTTGTAGTGCCAGTTTTAGTCGACGACGTTTTTTGGAGAGGCATCAGCTGCATTGTAGCGAACGTAGTACTGACACGAGCGTACCAATCAAACGTAATTGA
- Protein Sequence
- MTIYDNPESTATEDTICVICEQTNVTPTDLLYHLEEFHKIPSEYVKNITREELIDLIIINDDTSTCTFCDQKFSRRRSLIRHIKTIHKIENVLLHKCYECNIAFTTTGEYESHNTNIHPGENMMNCRICNTYFASYIALRRHISKHTASVKNENTDNNTKYVIACSICQQKFTRRLYLIGHLKRIHKLNNIPNYYCTECNISFQQHEEFKSHKNTKHLGLDVITCYICNATHSTYAALYKHFQTHTQEDGTSNSIDYRVTCLICRRKFTRAQNLMRHLKASHKIEDVPGYNFKKRNITYGREEELLPHNNTVHSTNKFKLEVDSDLPVETNEYPILDVKVEKETFACSVCKIRFKNRFSLNTHMRQAHNIKARYSCNICEKKYFRLYNLRLHKMSSHFFKCDSCTRCFPTNASLLEHMQSHTNNVVDEDKTDKSGSVVDTIEAYSIPLISESPLGDRKSKKSTLCHICAKTCATPSALKRHIDHHNNIRKHKCETCGFRFTAAVQLRNHMFTHSTDRTFACEVCGKTYRTKQTLNSHMLFHDDSTLRFTCTICNNKYRRNADLKAHSRVHTGERPKICKVCGAAFSRGMAEHMRTHKDTNPFKCHLCSASFSRRRFLERHQLHCSERSTDTSVPIKRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00920833;
- 90% Identity
- iTF_00920833;
- 80% Identity
- iTF_00920833;