Basic Information

Insect: Lordiphosa mommai
Gene Symbol: -
Assembly: GCA_018904225.1
Location: JAEIFT010000194.1:359342-382202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.38 22 5.8 2.1 1 23 644 666 644 666 0.96

2 7 1.9e-05 0.0011 19.4 1.1 1 23 672 694 672 694 0.98

3 7 7e-06 0.0004 20.7 0.2 1 23 700 722 700 722 0.98

4 7 3.9e-06 0.00022 21.5 1.4 1 23 728 750 728 750 0.98

5 7 0.0014 0.078 13.5 3.0 1 23 756 778 756 778 0.98

6 7 5.7e-06 0.00032 21.0 2.4 3 23 786 806 784 806 0.94

7 7 8.6e-06 0.00049 20.4 1.7 1 23 812 835 812 835 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.38	22	5.8	2.1	1	23	644	666	644	666	0.96
2	7	1.9e-05	0.0011	19.4	1.1	1	23	672	694	672	694	0.98
3	7	7e-06	0.0004	20.7	0.2	1	23	700	722	700	722	0.98
4	7	3.9e-06	0.00022	21.5	1.4	1	23	728	750	728	750	0.98
5	7	0.0014	0.078	13.5	3.0	1	23	756	778	756	778	0.98
6	7	5.7e-06	0.00032	21.0	2.4	3	23	786	806	784	806	0.94
7	7	8.6e-06	0.00049	20.4	1.7	1	23	812	835	812	835	0.98

Sequence Information

Coding Sequence: ATGTTGCCACTCCAGCAACAGCAACACCAGCCGGACCAAGTGCATCAGCCGTTTAATTGGCAATTGGAGGACTATGCGTACTTTCGTAAATGTGGCGAAATTACCACCTCACCGGATAGGCAATGTTTTGGCTTCAATTGCGCCTTCTGTCCGGCCATTTGTCTGCAATTCTCCGTCTTTATGGATCACATACGTGGACAACATTTACAGGATGTGAGACGACGATATGAGGGCCCGGAGGAGAAAATCGAACAAACAACGCAAACGGATTTAATGATAATGGAAATGGACTGTCCCGATATGTATCACCTAGACCCAGCAGACCCACCACATCAGGCCACAACAAATAAAAACAACAACAAAATATGTAGACAAATGGAGGACATAGACACGCAACGTATGGGTGTGGTAGACCTACAGCTGGTGACCCCCCCAATGCAGCAGCAGCAGCAGCTAGCAGGGCTAGACAATGCAGTCACATCCGAAATAGATTTGGTTTATGTCATGGAAAATCCCTTACCATTACCACCCTCACCGCCACTCTCGGCTGACGAACAGAGTCAGAGTTGTGTTCAGCCCTTGCTGGATCCATTTGAAGTACTGCAGGCGGGCATTACCACCAACACGCCCACTCATAAAGGGTTGACTTCTGCTCCCACACTGCCAAGATATGAGACACGGCGAGTGGCAATGCAACGCAAACTGCAAAAAGAGGAACAACTGGAGGAGAACGTAATGCAACTAACACCCCCAGCCACACCGCCCACCGAAGTAGCGCCCACTTCGCCCGCTAGCAGCGTGACCAGCGTGGACTTCAAGTTGCGCTCTCGTCGCGAACTGGAGCGGAATCGGGAATTTGTTAGCTCTTTACTCAAAAGCTATGAACGTCTGGAAAAATTATGGAATCCCAAGCATCCCGACTATAAATACAATGCCAAGCGTAGTGTTTATGGCGAATTGGCTGTTCCATTGGAAAATTCATTTCAAATGCAACTCACGGGAGCTGAAATTTTTGCCGTATTGAAAGAATTACGTGGACGCTATCGTCGAGAGTTAAGCAAACTGAATACTTTGGGTGGAAAATATAAATCCAGATTGTGGTATTTTGATAAAATGCATTTTCTACGCGGCGTCATCGAACACAAAAGGGCAGAGAGGGAGGCCAAGATCTCCAATGAGAGCACAGAAAGTGAGAAATCTTGCGAAACGGATGCCGATTCCTCCAGTAAATCTGCACAATATCGTGAAGTTCTTAGTTATATACTCGATGCATTTAAGCGACAGGAGTGTCTATGGAATCCACAACACTATGACTATGCCAGCTGTACCAAAAAGGATTTATATCGTGAAATTGCCACACAACTGCAGGAAGATCTCAATTATGAAATGAGCGGTGAAGAATGCTATCAGGAGATACAAAAGCTAAGAACACGTTATCGCAAAGAACTTCGCATGGTCATCAAACATAAGGGCTTGTATTTGCCCAAACTTTGGTGTTATGATGATTTGGAATTTTTGCATCCCATATTGCAGGAGCAGATCTTCAATAAGATCAGTAAGAAAGTGGGCGTGGTGGAAACCCAACAGAAAACCAAATTTATACATGCCCCAGTCATAGAGTTTGCCTCAACGGAGGATCAGCTGCAATTTGTGGAGATTTATAGAAACTACTCAGCTTTATGGGATGTAGATCATCCGGACTTTCGCTCCAATGCCTATCGTAGTCAGGCTTTAAGTCAAATGCTGGATGAGTTGAATACCACATTTCATGGTGAATATACGGCAGCACAATTGGAGAAAACTTTGTTTGAGCTGCGTAAGGATTTCTCTGTCCAAAAAAGGAAAATTCTTACCAATTCCAGTGCCTCCAGCAGCATACCCTTACTGCATGCCAAGCTGGCTCAGTTCTTGGAACAAAATCTGGGACCTTTTAGCTGTGATATTTGCTCGCAGCTAATCAAAACCTGTGATCAGTTTAAGGTACATCGTTCAGCTCATGATGGTACCCAGCCTTTTATATGTACCTTGTGTGGCAAGGGTTTCCAAATGCCCTGTAATTTAACGGTTCATATCAGACGACATCGCAGAGATTTTCCCTATGCTTGTGAGCGATGTGATAAAAGATTTGCCACCTCCACCGAAGTGGCCATACATATGCGTACACATACGGGAGAAAGACCCTATATATGCGATTTGTGTGGCAAATCCTTTAAAACCTGGTCATTCTTTGACATACATCGAAGAAGACATTTAAATCAATCTACCTACCATTGTACCATCTGTCCCAAGGGTTTCTATGAGAAGAATCGTTTCACTGATCACATGAACTCCCATTGGGCCATACGCAAACATTTGTGTACGGTTTGCGGTAAAACCTTTACCACCTATGGAAATCTCAAGAAACATACCGAACTGCATTTGGCGGTAAAGAAATACAAGTGCTCCACCTGTGGTAAACGATTTGCACAGTTTGCCAGCCTGCGTTGGCACAAGAAACGGGAGCATAGCAGCGAAGTGGAACTGGAGGCAGAGAAGAGCACTTGA
Protein Sequence: MLPLQQQQHQPDQVHQPFNWQLEDYAYFRKCGEITTSPDRQCFGFNCAFCPAICLQFSVFMDHIRGQHLQDVRRRYEGPEEKIEQTTQTDLMIMEMDCPDMYHLDPADPPHQATTNKNNNKICRQMEDIDTQRMGVVDLQLVTPPMQQQQQLAGLDNAVTSEIDLVYVMENPLPLPPSPPLSADEQSQSCVQPLLDPFEVLQAGITTNTPTHKGLTSAPTLPRYETRRVAMQRKLQKEEQLEENVMQLTPPATPPTEVAPTSPASSVTSVDFKLRSRRELERNREFVSSLLKSYERLEKLWNPKHPDYKYNAKRSVYGELAVPLENSFQMQLTGAEIFAVLKELRGRYRRELSKLNTLGGKYKSRLWYFDKMHFLRGVIEHKRAEREAKISNESTESEKSCETDADSSSKSAQYREVLSYILDAFKRQECLWNPQHYDYASCTKKDLYREIATQLQEDLNYEMSGEECYQEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDDLEFLHPILQEQIFNKISKKVGVVETQQKTKFIHAPVIEFASTEDQLQFVEIYRNYSALWDVDHPDFRSNAYRSQALSQMLDELNTTFHGEYTAAQLEKTLFELRKDFSVQKRKILTNSSASSSIPLLHAKLAQFLEQNLGPFSCDICSQLIKTCDQFKVHRSAHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACERCDKRFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTYHCTICPKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCSTCGKRFAQFASLRWHKKREHSSEVELEAEKST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00915651;
90% Identity: iTF_00914761; iTF_00918438; iTF_00915651;
80% Identity: -