Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: L
Assembly: GCA_018904285.1
Location: JBAMBO010004036.1:925215-943065[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5e-05 0.0011 20.0 2.9 1 23 143 165 143 165 0.98

2 17 0.5 38 5.7 6.2 1 23 171 193 171 193 0.97

3 17 2.4e-07 1.8e-05 25.6 3.2 1 23 199 221 199 221 0.99

4 17 1.8e-05 0.0013 19.7 0.4 1 23 227 249 227 249 0.99

5 17 0.03 2.2 9.5 0.2 2 23 320 344 319 344 0.91

6 17 0.00084 0.063 14.4 0.7 2 23 369 391 368 391 0.96

7 17 0.039 3 9.2 0.7 1 23 467 489 467 489 0.97

8 17 0.011 0.83 10.9 0.1 2 23 497 518 496 518 0.91

9 17 0.00016 0.012 16.7 0.1 1 23 526 551 526 551 0.92

10 17 6 4.5e+02 2.3 1.2 2 23 587 609 586 609 0.92

11 17 0.0036 0.27 12.4 1.1 1 23 652 675 652 675 0.97

12 17 0.0071 0.53 11.5 1.2 2 23 835 857 834 857 0.96

13 17 0.16 12 7.2 0.1 1 23 863 885 863 885 0.92

14 17 3.2 2.4e+02 3.2 1.2 2 23 893 914 893 914 0.96

15 17 1.1 80 4.7 0.5 2 23 1018 1039 1018 1039 0.94

16 17 0.011 0.85 10.9 0.0 1 23 1049 1071 1049 1071 0.96

17 17 0.00014 0.01 16.9 1.9 1 23 1078 1100 1078 1100 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5e-05	0.0011	20.0	2.9	1	23	143	165	143	165	0.98
2	17	0.5	38	5.7	6.2	1	23	171	193	171	193	0.97
3	17	2.4e-07	1.8e-05	25.6	3.2	1	23	199	221	199	221	0.99
4	17	1.8e-05	0.0013	19.7	0.4	1	23	227	249	227	249	0.99
5	17	0.03	2.2	9.5	0.2	2	23	320	344	319	344	0.91
6	17	0.00084	0.063	14.4	0.7	2	23	369	391	368	391	0.96
7	17	0.039	3	9.2	0.7	1	23	467	489	467	489	0.97
8	17	0.011	0.83	10.9	0.1	2	23	497	518	496	518	0.91
9	17	0.00016	0.012	16.7	0.1	1	23	526	551	526	551	0.92
10	17	6	4.5e+02	2.3	1.2	2	23	587	609	586	609	0.92
11	17	0.0036	0.27	12.4	1.1	1	23	652	675	652	675	0.97
12	17	0.0071	0.53	11.5	1.2	2	23	835	857	834	857	0.96
13	17	0.16	12	7.2	0.1	1	23	863	885	863	885	0.92
14	17	3.2	2.4e+02	3.2	1.2	2	23	893	914	893	914	0.96
15	17	1.1	80	4.7	0.5	2	23	1018	1039	1018	1039	0.94
16	17	0.011	0.85	10.9	0.0	1	23	1049	1071	1049	1071	0.96
17	17	0.00014	0.01	16.9	1.9	1	23	1078	1100	1078	1100	0.97

Sequence Information

Coding Sequence: ATGATGGCCTTGAAGATGTTGTATCGCGGTCCTAGTTCGCGTTTGGAGAATTTAATTGAAAAGATTCAGGCCACCAAGGAGATTACAAATAACGATATGTACAGCACTCACACCTCCTCCAGTTATTCGCCCAGCATATCGGACGGAACTCTGACACCCAACTATAGCTCCACAACCGTCACGCAGGAGGATCACCAGTCAGCCGCCGAAGTCAAAACAAATGGGGAGGGCGAGGAGGCGCCTCCCAAACCTAAACGACCGCCTCATTTCCATCACCATCATCATTACCACCATCAGCAGGCTCTTAAAATTGCCAACAAGTTACGCAAAATCAATAAAGAAGCCAAAATGGGAGCTGCAGCTGCAGGAGCCCCCAAGTTTGATAAGTTGACAGGCGAGGGCATTAAGAGCCGAGGCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTTGGTTACTTGAAGCATCACGTGCAGAGCCATGCCGAACATCTGCCCTTTAAGTGCGAATACTGCGCCAAGCTGTTCAAGCACAAACGCTCCCGAGATCGCCATAAGAAGCTGCACACCAATGAAAGGAACTACAAGTGTCCACACTGCGAGGCGGCCTTCTCGAGAAGCGATCACTTGAAGATTCATATGAAAACGCACGACATACAAAAGCCCTTCCAGTGCAGCATGTGCAACCGTGGCTATAATACGGCCGCCGCTCTAACCTCTCACATGCAAAAGCACAAGAAGAACGCAGCTATTCTAGCGGCTGGAGGGAATCCCAATGCCCTCAACTACAGTCCACGGTCGACAGGCTCGGCTTCGGTTTCCAGTAATGGCAGTCTGCAGAAACGTCGCTACGCCTTGGCCCTGGCCACCGATAGTAGTCCCAGTCGCTTAGAGTATCCCAAACGTTCTCGGCAACATCATCCACCCACACCCACTCCCCTGCTACGTTGCAGCTACTGTCCCAAGGTGACGGAGTTCAGTAGCCTGGAGCAATTGAATGCCCATTTGCAGAATGTCCATGAACAGCCACAGCAACAGTCGCCGACCGTGAAAACCCCCTTGTCCGAGGGGGTGGGAGAGAACTTTCATTTAAACTGCGAGTACTGCACCATGAAATTTGGCAACATAGCCACACTGTTCCAGCATATGCGTACCACCCATCTGGATCGCCTAAGTTCACCCAACTCGTACTACGAGCACTTCAATCGCCTGGCCACCGCGGGTACCTTTAGTCCACGCTTGGCCTTGGATCTGCCCAAAATTAAGCAGGACCCGCCCAGTCCCGAACGCAAGACCGAAGAGGATTTGCCCACGGATTTGAGTAGCAACAAGCGACGTACTTTGACTCCCCCGGCTGCAGTGGCCACTGCCCCCAATCCGGGTGTATTCTTTTGCAATCAATGCAACGCAGGATTGCCGGACTTTGAGAGTTTCCGTAACCATCTGAAGACCCATCTGAGCGAAGGTATGCAACTGATTTGTCCACATTGTGGTCTCAGTCTACCCGAGCAATCGGAGTACGAACGTCATGTGGTGGCCCACTTTTTGATAACCAACTCGGAGTTTCCCTGTGGCAAGGCCAGCTGTGGCAAGTCCTTTAACCAGGCCGAGGAGCTGCAGCAGCACTTGCTCTCGGAGCATGTGGTAACCCTGATGAAGTGCGCTCTCTGCTCGGAGCTGTGCGAGACGCGCATGGCCATGCAGCTGCATTTGGCCTGTGCCCATAGCCAGGAGACCAAGCTGCTGCGTTGCAGCGCCTGCATGGAGCTCTTCCGTACGGAAGCGGACTTCCATGTGCATGTCAAGACACGTCATCAGTTGGGCACCCAGCTGGCTGCCGCCAGCATAAGTCCAGCCAATCCCTTGCAGTGCATGTTTTGCCGAGCGGTTTGCTCCTCGGACTTGGAAATGCATTTCCATTTGGCCGCCCATGCCCGCCAGTTTCGTTGTCCCTCCTGTCCCGAAACTTTTCACGTGGAATTCCTGTTGGATCGTCACATGCAGAGCCAGCACGGTGGAGTCAAGGACAAAGAGCAGACCTCGCCCAATATGGGTAGCCTGTATGTGAACGCCCTGCTGCCGCCTTTGGCAGCAGCTGCGGCCGCGGCAGCCGCCACCAATAACAACAGCAGCATCATCGACTACAACGTGGCCTTTAAGGGTCTCTTTGGAGGCACTCACTCGGCCAGTTCCAAATTCTACAGTCCCCTGCAGGTGGATACCAGCGCTCTGAAACCGCAAGCCTCACCGCATCCTGCCTTGATGTACGGACTAAGCCAAAGATACTTGATGGAAATGTATGCCGCCAAGTCCACTTCACCCGGCAATAGCTCATCAGAGACTGGAACTTCCGCACCATTACCACCAGTGCCGCCGGCGCCGCCTACTACCTTCAGTTGTGGCATGTGCGAGCGTCAGGATCTGCGTAGTGAGGCGGAACTTCACTCGCATCGCAAGCTGGCGCATAATCTGAAGACCGGTGTCAGCCTACGCTGTGCCTACTGTGCGGGTAATTTCAAGTCTCGTGCCGAGCTGGAGCAGCACATGAAAAGCTGCCACAATTCCACGGGCAAGCACAAGTGTCTCATCTGTGATGAGATCTTTCCCTCACCCGCCATACTGGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGTCAGTCGGGCAAGTGTGCCCATTGCACGCAGCACCTGGAGGATGTGGCCGCTTTTCGTGCCCATTTGAGTGAACATGGCAGCGACGGTTCCCTGCCCTTGGCCTGTATCTGTTGCCGTCAGACTCTGCACTCCGAGTTCGAGTTGAGTTTGCATGCCAAATTCCATACCAAATCCAATGTTTCCTCGGGTAGTCTGCAGGAACCTGTGTGTGCTTTGTGCCTGGAGCCTTTACCGGGTGCGGTGGAGTCAGCCCAAGTCAGCCCAGCCAAACTCTGCGAGAAATGTTGTCGCAAGCATAACTTGAATGGCAAACGTAATAAAAATGTAGCCGAATCACCCGTAACGCCATCCACAGCTCCTGTTGCTGTCCCCTTTCTGGAGAATCGCTGTAATCTGTGTAAAATGATCCTACCCCATGCACAAAAGCTGCAGGAGCATCTGGTCGAGCATACCTTTGCGGGAACTGAACAACGCGGCTACAACTGCTACATCTGCTCAGCGGTGTTCACCGCTCCAGCGGGTCTACTCAATCATATGGCCGAGCATGGAGCTCATGCACGTCCCTACGACTGTAATTTGTGTCCAGAGAAATTCTATTTTCGTTCGGAACTGGAACATCATCAGCGTGGTCATGAAATGCGACCGGCACCCCGACCAACCAAACAGGAAGTGGAGAGACCCACTAGTTCTCCTAGTAATAGTAACCATACTCATCATAGTCCCGCTACAGTCAAGCAGGAGCTGTACGAAACGGAAACTAACGACGAGACAATGCCCGAGGAGGAAGAGTATATAGAAGTCGAGCAAGTGCCGCCAGAGACACGGACGGGAGATATAATGGAACGTTCTAGTAGCAGCGCTTGA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNYSSTTVTQEDHQSAAEVKTNGEGEEAPPKPKRPPHFHHHHHYHHQQALKIANKLRKINKEAKMGAAAAGAPKFDKLTGEGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASVSSNGSLQKRRYALALATDSSPSRLEYPKRSRQHHPPTPTPLLRCSYCPKVTEFSSLEQLNAHLQNVHEQPQQQSPTVKTPLSEGVGENFHLNCEYCTMKFGNIATLFQHMRTTHLDRLSSPNSYYEHFNRLATAGTFSPRLALDLPKIKQDPPSPERKTEEDLPTDLSSNKRRTLTPPAAVATAPNPGVFFCNQCNAGLPDFESFRNHLKTHLSEGMQLICPHCGLSLPEQSEYERHVVAHFLITNSEFPCGKASCGKSFNQAEELQQHLLSEHVVTLMKCALCSELCETRMAMQLHLACAHSQETKLLRCSACMELFRTEADFHVHVKTRHQLGTQLAAASISPANPLQCMFCRAVCSSDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVKDKEQTSPNMGSLYVNALLPPLAAAAAAAAATNNNSSIIDYNVAFKGLFGGTHSASSKFYSPLQVDTSALKPQASPHPALMYGLSQRYLMEMYAAKSTSPGNSSSETGTSAPLPPVPPAPPTTFSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCTQHLEDVAAFRAHLSEHGSDGSLPLACICCRQTLHSEFELSLHAKFHTKSNVSSGSLQEPVCALCLEPLPGAVESAQVSPAKLCEKCCRKHNLNGKRNKNVAESPVTPSTAPVAVPFLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGYNCYICSAVFTAPAGLLNHMAEHGAHARPYDCNLCPEKFYFRSELEHHQRGHEMRPAPRPTKQEVERPTSSPSNSNHTHHSPATVKQELYETETNDETMPEEEEYIEVEQVPPETRTGDIMERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00917457;
90% Identity: iTF_00916567; iTF_00915609; iTF_00920085; iTF_00919324; iTF_00917457; iTF_00914737;
80% Identity: -