Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: L
Assembly: GCA_035044985.1
Location: JAWNNO010005033.1:179117-191370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.4e-05 0.00087 20.0 2.9 1 23 143 165 143 165 0.98

2 17 0.47 30 5.7 6.2 1 23 171 193 171 193 0.97

3 17 2.2e-07 1.4e-05 25.6 3.2 1 23 199 221 199 221 0.99

4 17 1.7e-05 0.0011 19.7 0.4 1 23 227 249 227 249 0.99

5 17 0.016 1 10.3 0.2 2 23 320 344 319 344 0.92

6 17 0.003 0.19 12.6 0.4 2 23 369 391 368 391 0.95

7 17 0.082 5.3 8.1 0.7 1 23 468 490 468 490 0.97

8 17 0.01 0.65 10.9 0.1 2 23 498 519 497 519 0.91

9 17 0.00015 0.0097 16.7 0.1 1 23 527 552 527 552 0.92

10 17 5.5 3.5e+02 2.3 1.2 2 23 588 610 587 610 0.92

11 17 0.0034 0.22 12.4 1.1 1 23 654 677 654 677 0.97

12 17 0.0066 0.42 11.5 1.2 2 23 828 850 827 850 0.96

13 17 0.029 1.9 9.5 0.0 1 23 856 879 856 879 0.93

14 17 2.9 1.9e+02 3.2 1.1 2 23 887 908 887 908 0.96

15 17 0.99 63 4.7 0.5 2 23 1011 1032 1011 1032 0.94

16 17 0.011 0.68 10.9 0.0 1 23 1042 1064 1042 1064 0.96

17 17 0.00013 0.0081 16.9 1.9 1 23 1071 1093 1071 1093 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.4e-05	0.00087	20.0	2.9	1	23	143	165	143	165	0.98
2	17	0.47	30	5.7	6.2	1	23	171	193	171	193	0.97
3	17	2.2e-07	1.4e-05	25.6	3.2	1	23	199	221	199	221	0.99
4	17	1.7e-05	0.0011	19.7	0.4	1	23	227	249	227	249	0.99
5	17	0.016	1	10.3	0.2	2	23	320	344	319	344	0.92
6	17	0.003	0.19	12.6	0.4	2	23	369	391	368	391	0.95
7	17	0.082	5.3	8.1	0.7	1	23	468	490	468	490	0.97
8	17	0.01	0.65	10.9	0.1	2	23	498	519	497	519	0.91
9	17	0.00015	0.0097	16.7	0.1	1	23	527	552	527	552	0.92
10	17	5.5	3.5e+02	2.3	1.2	2	23	588	610	587	610	0.92
11	17	0.0034	0.22	12.4	1.1	1	23	654	677	654	677	0.97
12	17	0.0066	0.42	11.5	1.2	2	23	828	850	827	850	0.96
13	17	0.029	1.9	9.5	0.0	1	23	856	879	856	879	0.93
14	17	2.9	1.9e+02	3.2	1.1	2	23	887	908	887	908	0.96
15	17	0.99	63	4.7	0.5	2	23	1011	1032	1011	1032	0.94
16	17	0.011	0.68	10.9	0.0	1	23	1042	1064	1042	1064	0.96
17	17	0.00013	0.0081	16.9	1.9	1	23	1071	1093	1071	1093	0.97

Sequence Information

Coding Sequence: ATGATGGCCCTGAAGATGTTATATCGCGGTCCCAGTTCGCGTTTGGAGAATTTAATTGAGAAAATTCAGGCCACCAAGGAGATAACAAACAACGATATGTACAGCACTCACACCTCCTCCAGCTATTCGCCCAGCATATCGGATGGAACCCTGACACCTAACTAcagcacaacaacagccacgCAGGAGGATCACCAGTCAGCCAACGAGGCAAAAACCAATGGGGAGGGCGAGGAGGCGCCTCCCAAGCCAAAGCGACCGCCTCATTTCCATCACCACCATCATTACCATCACCAGCAGGCTTTGAAAATTGCCAACAAGTTGCGCAAAATCAATAAGGAAGCCAAAATGGGAGCAGCGGCTGCTGGAGCCCCCAAGTTTGATAAGTTGACAGGCGAGGGCATTAAGAGCCGAGGCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTTGGTTACTTGAAGCATCACGTGCAGAGCCATGCCGAACATCTGCCCTTTAAGTGCGAGTACTGCGCCAAGCTGTTCAAGCACAAACGCTCCCGCGATCGCCATAAGAAGCTGCACACCAATGAGAGGAACTACAAGTGTCCGCACTGTGAGGCGGCCTTCTCGCGAAGCGATCACCTGAAGATCCACATGAAGACGCACGACATACAGAAGCCCTTCCAGTGCAGCATGTGCAATCGTGGCTACAACACGGCCGCCGCTTTAACCTCGCACATGCAGAAGCACAAGAAGAACGCCGCCATTCTAGCGGCTGGAGGCAATCCCAATGCCCTCAACTACAGTCCACGCTCCACAGGCTCCGCTTCGGTGTCCAGCAATGGCAGCCTGCAGAAGCGTCGCTATGCCCTGGCCCTGGCCACCGATAGTAGTCCCAGTCGCCTGGAGTACCCCAAACGTTCGAGGCAACATCATCCACCCACCCCCACTCCACTGCTGCGCTGCAGCTACTGTCCCAAGGTGACGGAGTTCAGTAGCCTGGAGCAGTTGAATGCCCATTTGCAGAGTGTCCACGagcaaccgcagcaacagTCGCCGACCCTGAAAGCGCCAGCCTCCGAGGGGTTGGGCGAGAACTTTCACTTGAGCTGCGAGTACTGCACCATGAAGTTTGGCAACATAGCCACGCTGTTCCAGCACATGCGAGCCACCCATCTGGACCGCCTGAGTTCACCCAACTCGTACTACGAGCACTTCAATCGCCTGGCCACCGCGGGCACCTTTAGTCCTCGCCTGGCCTTGGATCTGCCCAAGATTAAACAGGACCTGCCGAGTCCCGAGCGCAAGACCGAAGAGGACTTGCCCACGGATCTGAGCAGCAACAAGCGACGTACTTTGACTCCACCGGCGGCAGTGGCCTCCTCCGCCCCCAATCCGGGTGTATTCTTCTGCAATCAATGCAACGCCGGTTTGCCGGACTTTGAGAGTTTTCGTAACCACCTGAAGAGCCACCTGAGCGAAGGTATGCAACTGATCTGTCCGCACTGTGGTCTCAGTCTGCCCGAGCAATCGGAGTACGAACGTCATGTGGTGGCCCACTTTTTGATCACCAACTCGGAGTTTCCCTGTGGCAAGGCCAGCTGTGGCAAGTCCTTCAACCAGGCCGAAGAACTGCAGCAGCACCTGCTCTCGGAGCATGTGCTAACCCTGATGAAGTGCGCCCTCTGCTCGGAGCTGTGCGAGACGCGCATGGCCATGCAGCTGCATTTGGCCTGTGCCCACAGCCAGGAGACCAAGCTGTTGCGTTGCAGTGCCTGCATGGAGCTCTTCCGCACCGAAGCCGACTTCCATGTGCATGTCAAGACGCGTCATCAGCTGGGCACCCAGCtggccgccgccgccagcGTGAGTCCGGCCAATCCCCTGCAGTGCATGTTCTGTCGAGCGGTCTGCTCCTCGGACCTGGAGATGCACTTCCATTTGGCCGCGCATGCCCGCCAGTTTCGTTGTCCCTCCTGTCCCGAAACCTTTCACGTGGAGTTCCTGTTGGATCGGCACATGCAGAGCCAGCACGGCGGGGTCAAGGACAAGGAGCAGACCTCGCCCAACATGGGTAGTCTTTATGTGAACGCCTTGGCCCTGGCcgccaccaacaacaacagcagcatcaTCGACTACAACGTGGCCTTTAAGGGCCTCTTTGGAGGCACTCCCTCGGCCAGTTCCAAGTTCTACAGTCCCCTGCAGGTGGATACCAGCGCGTTGAAACCGCAGGCCTCACCGCACCCTGCCTTGATGTACGGCCTAAGCCAAAGATATCTGATGGAAATGTACGCCGCCAAGTCCACTTCGCCCGGGAATAGCTCCTCAGAGACTGGTGCTGCCgcaccgccgccaccaccgccgccggcGCCGCCCACCACCTTCAGTTGCGGCATGTGCGAGCGTCAGGATCTGCGTAGCGAGGCGGAACTGCACTCGCATCGCAAACTGGCCCACAATCTCAAGACAGGCGTCAGCCTGCGCTGCGCCTACTGTGCGGGTAATTTTAAGTCGCGTGCCGAGCTGGAGCAGCACATGAAAAGCTGCCACAATTCCACCGGCAAGCACAAGTGTCTCATCTGCGATGAGATCTTTCCCTCACCCGCCGTACTGGCCGAGCACAAGCTGCAGGTGCACACCAAGGTGGGTCAGTCGGGCAAGTGTGCGCACTGCTCGCAGCATCTGGAGGATGTGGCCGCTTTTCGTGCCCATTTGAGTGAGCATGGCAGCGACGGTTCCCTGCCCCTGGCCTGCATCTGTTGCCGTCAGACTCTGCACTCCGAGTTCGAGTTGAGTTTGCATGCCAAGTTCCACACCAAGTCCAGCGTTTCCTCGGGCAGTCTGCAGGAACCGGTGTGTGCCTTGTGCCTGGAGCCGTTAGTCGGCACGGCGGAGTCAGCCCCCTCACCCGCCAAACTGTGCGAGAAGTGCTGCCGCAAGCACAACTTGAACGGCAAACGTAGTAAAAATATAGTCGAATCGCCCGCAACGCCAACCACAGCTCCAGCCGTTGCGCCCTTCCTGGAGAATCGTTGTAATCTGTGTAAAATGATACTGCCCCATGCACAGAAACTGCAGGAACATCTGGTGGAGCACACCTTTGCGGGAACTGAACAACGCGGCTACAACTGCTACATCTGCTCGGCGGTGTTCACCGCTCCGGCGGGTCTACTCAATCACATGGCCGAGCATGGTGCGCATGCACGTCCCTACGACTGCAATTTGTGTCCAGAGAAGTTCTATTTTCGTTCGGAACTGGAACATCATCAGCGTGGTCATGAGATGAGACCCACACAGCGACCAACCAAACAGGAGGTGGACAGAGCCACCAGTTCTCCCAGTAACAGTAATCATACTCATCACAGTCCCACTACAGTCAAACAGGAGCTGTACGAGACGGAAACTAACGATGCGGCCATGCCCGAGGAGGAAGAGTACATTGAAGTGGAGCAAGTGCCGCCGGAGACACGAACGGGAGATATAATGGAACGTTCTAGTAGCAGTGCTTGA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNYSTTTATQEDHQSANEAKTNGEGEEAPPKPKRPPHFHHHHHYHHQQALKIANKLRKINKEAKMGAAAAGAPKFDKLTGEGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASVSSNGSLQKRRYALALATDSSPSRLEYPKRSRQHHPPTPTPLLRCSYCPKVTEFSSLEQLNAHLQSVHEQPQQQSPTLKAPASEGLGENFHLSCEYCTMKFGNIATLFQHMRATHLDRLSSPNSYYEHFNRLATAGTFSPRLALDLPKIKQDLPSPERKTEEDLPTDLSSNKRRTLTPPAAVASSAPNPGVFFCNQCNAGLPDFESFRNHLKSHLSEGMQLICPHCGLSLPEQSEYERHVVAHFLITNSEFPCGKASCGKSFNQAEELQQHLLSEHVLTLMKCALCSELCETRMAMQLHLACAHSQETKLLRCSACMELFRTEADFHVHVKTRHQLGTQLAAAASVSPANPLQCMFCRAVCSSDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVKDKEQTSPNMGSLYVNALALAATNNNSSIIDYNVAFKGLFGGTPSASSKFYSPLQVDTSALKPQASPHPALMYGLSQRYLMEMYAAKSTSPGNSSSETGAAAPPPPPPPAPPTTFSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKCLICDEIFPSPAVLAEHKLQVHTKVGQSGKCAHCSQHLEDVAAFRAHLSEHGSDGSLPLACICCRQTLHSEFELSLHAKFHTKSSVSSGSLQEPVCALCLEPLVGTAESAPSPAKLCEKCCRKHNLNGKRSKNIVESPATPTTAPAVAPFLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGYNCYICSAVFTAPAGLLNHMAEHGAHARPYDCNLCPEKFYFRSELEHHQRGHEMRPTQRPTKQEVDRATSSPSNSNHTHHSPTTVKQELYETETNDAAMPEEEEYIEVEQVPPETRTGDIMERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00914737; iTF_00916567; iTF_00918437; iTF_00920085; iTF_00915609; iTF_00919324;
90% Identity: iTF_00918437;
80% Identity: -