Lmag000122.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- dmd-4
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010000029.1:124698-131589[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 6.9e+03 -2.3 0.0 36 44 10 18 6 20 0.80 2 3 1.7e-25 9.9e-22 77.2 8.9 1 47 35 81 35 81 0.98 3 3 0.43 2.5e+03 -0.9 0.2 23 31 285 293 277 298 0.75
Sequence Information
- Coding Sequence
- ATGGCCAGTGTCAGTGATGATGGTGAAGTGGTGGCCAAACGTCAACGCGTGGGTTCCAAGTCCCTTAAATTAGTTGATCCGCAGCAGCCTAAAGTCGCGAATCGTGTACCCAAATGTGCACGGTGTCGAAATCATGGCATTATATCGGAACTGAGGGGACACAAGAAGCTGTGCACCTACAAGAGCTGTAAATGCGCCAAATGTGTGCTGATTTTTGAACGGCAGCGGATCATGGCCGCACAGGTGGCCCTGAAGCGTCAACAGGCCGTGGAGGATGCGATTGCGCTGCGTTTGGTGGCCAATAAAACGGGACGCAAAATCGATGCACTACCGCCGGGAAATATCTTTGGTTTGACGGTGACAGAACCCAGGGAGCAGCAGTTAACTGAATTTTCCAAGGAGCCAGATGAGGAGGaaagcagcgagcagcagcagACCCCAGAGCGGGAGCCGCCGGCAGTGGCGCAGGATTTGAGTGCTACGCGCAGGGAGAATGTCTCCCAGACGGCCATCGATATGCTAGCTCAGCTGTTTCCACAGCGTAAAAGATCTGTGTTAGAATTGGTATTGAAACGTTGCGATCTGGACTTGATAAGGGCCATCGAAAATGTTTCACCCAACGCAGAGGCTGTTACCAGTCAATTGACGCCACCGGCACCACCATTACAATTACAGGCCTTGCAGCTGACCACACCCCAAAGGAACAGCGCCTTCAGGCCGGTTATAGCGGAACAGTATCCAGGCAAGCCACCCGCTACAATGTTGGGCAACAATTCGATTTGTGCCTATCCCAAATGGTTTGTGCCTCTGTCCTTTCCCGTTACCATGGGACACTTGTCGAATCTGGCTCCACGCTGCACTTTGCCCAACTGCGCCTGCCTGGAGAGCTATCAGTTCCACTAA
- Protein Sequence
- MASVSDDGEVVAKRQRVGSKSLKLVDPQQPKVANRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDALPPGNIFGLTVTEPREQQLTEFSKEPDEEESSEQQQTPEREPPAVAQDLSATRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPNAEAVTSQLTPPAPPLQLQALQLTTPQRNSAFRPVIAEQYPGKPPATMLGNNSICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919838;
- 90% Identity
- iTF_00915352;
- 80% Identity
- -