Basic Information

Gene Symbol
Xbp1
Assembly
GCA_018904285.1
Location
JBAMBO010004063.1:685065-686080[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.6e-15 3.6e-12 46.8 11.1 2 59 83 140 83 142 0.94
2 3 0.00023 0.32 11.7 3.6 35 62 137 164 136 166 0.91
3 3 7 9.7e+03 -2.7 0.1 25 35 213 223 211 225 0.73

Sequence Information

Coding Sequence
ATGGCACCCACAGCTAATGCAGTTCTAATAACAACCAAGTGCTCGTCATTGCCCAAACTGAGGCCCGCTCCTGGCCTAATGATTCAAGGGATTCTCAAGGGATCGGGATCTCAAGGGATTCTCAAGGATTCCGAGGGATACAACAGTTCGGACTGCTCGTCGGTTCACGATATGGATATGGATGAGGAGACTATGTTGGCCACGCCCACCAAGGCCAAGAAACGTCGTCTAGATCATTTGACATGGGAGGAAAAAGTTCAGAGAAAAAAACTCAAGAATCGTGTGGCTGCTCAGACCTCACGAGATCGGAAAAAGGCACGCATGGAGGAAATGGAATATGAAATCAAAGAGCTTACAGACAAAACGGAAATCTTGCAAAACAAATGCGAAAGTCTACAGACCATCAATGAATCGCTTTTGGCCAAAAATCAGAAGCTGGACACAGAAGTTGAACTATTGCGTCAGGAACTGGCCGAGTTCAAGCAGCAAACCAAATGCAACATCACCAGCAGCACCAGCTCCCCAGCCCGCCCAGGCGCTGAGGGCTGTGCGTCCACTAACCTTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACACAAAGTGGACACACAGTCGTCAGCGCGTGCGCTGATGGGGGAGCTGGAGCAACAGCTGAAGAGCAGCCGGTCGATGGCCTCCCTATGGAAGGTTGTGGCGCTCTGCCTTCTCTACAAGACATGCTGCTCGTCGACGACGAAGAGTTCGATGCGCGAAGGCTTGAAGAGCTGGCCGAGAGTCTGCTCGCAGATATCTCAGCAGACCTGGAAGCAGGCGCTGGAGCATGCGGCCAAGTTGCTGCCCAAAATACAGGCCACACAGAGCGATTCCCTGGACCAGTGGTGGGGACCGCAGCAGAGTGCCTGGAATCCAGCGGGCATAGAAGTGATGGCCTAA
Protein Sequence
MAPTANAVLITTKCSSLPKLRPAPGLMIQGILKGSGSQGILKDSEGYNSSDCSSVHDMDMDEETMLATPTKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCESLQTINESLLAKNQKLDTEVELLRQELAEFKQQTKCNITSSTSSPARPGAEGCASTNLGSAASNADPLPQGTHKVDTQSSARALMGELEQQLKSSRSMASLWKVVALCLLYKTCCSSTTKSSMREGLKSWPRVCSQISQQTWKQALEHAAKLLPKIQATQSDSLDQWWGPQQSAWNPAGIEVMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-