Lcol001465.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- Xbp1
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000363.1:93617-94602[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-15 2e-12 47.1 11.3 2 61 75 134 75 135 0.94 2 2 7.3e-05 0.085 13.1 8.0 26 63 113 150 112 159 0.86
Sequence Information
- Coding Sequence
- ATGGCACCCACAGCTAATGCAGTTGTGATCACCTTGCCCAAACTAAGGCCCGCCCCCTTGATGACAGCTGCGCTGCTCAAGGGCGCCGCCGCCGCCTCACCCGCTGCATCCAGTTCCGGTTACACCTCCTCCTCATCATCGGTTCACGAAATGGATTGCTACGAGGAGTCTCTGGCCACACCCACCAAGGCCAAGAAACGTCGTCTGGATCATTTGACCTGGGAGGAGAAAGTACAGAGAAAGAAACTCAAGAATCGTGTGGCCGCTCAAACCTCACGAGATCGCAAAAAGGCACGCATGGAGGAAATGGAATACGAAATCAAGGAACTAACAGATAAAACGGAAATCCTGCAAAACAAATGCGAAAGTCTACAAACCATCAATGAATCACTATTGGCCAAAAATCAGAAACTCGACACAGAAGTGGAACTACTACGTCAGGAACTGGCCGAATTCAAGCAGCAACAGCAGCAAACCAAATGCATCAGTCCCTCCCCAGCCCGCCCAGGCGCTGAGGGCTGTGCGTCCACTAACCTTGGATCTGCAGCATCCAATTATAATGCTGACCCTCTGCCGCAGGGTACACACACAGTGGACACACAGTCGTCAGCGCGTGCGCTGTTGGGGGAGCTGGAGCAACAGCTGAAGAGCAGCCGCTCGATAGCCTCCCTGTGGAAGGTTGTGACTCTCTGCCTACTCTACAAGACATGCTGCTCGTCGACGACGAAGAGTTCGACGCGCGAAGGCTTGAAGAGCTGGCCGAGAGTCTGCTCGCAGATATCTCCGCAGACCTGGAAGCAGGCGCTGGAGCATGCGACCAAGCTGCTGCCCAAAATGCAGGCCAAACAGAGCGATTGCCTGGATCAGTGGTGGGGACCACAGCAGAGTGCCTGGAATCCGGCGGGCATAGAAGTGATGGCGTAA
- Protein Sequence
- MAPTANAVVITLPKLRPAPLMTAALLKGAAAASPAASSSGYTSSSSSVHEMDCYEESLATPTKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCESLQTINESLLAKNQKLDTEVELLRQELAEFKQQQQQTKCISPSPARPGAEGCASTNLGSAASNYNADPLPQGTHTVDTQSSARALLGELEQQLKSSRSIASLWKVVTLCLLYKTCCSSTTKSSTREGLKSWPRVCSQISPQTWKQALEHATKLLPKMQAKQSDCLDQWWGPQQSAWNPAGIEVMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00917804;
- 90% Identity
- -
- 80% Identity
- -