Basic Information

Gene Symbol
ct
Assembly
GCA_035044985.1
Location
JAWNNO010004396.1:408490-456159[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.3e-27 7.3e-23 80.7 0.0 3 72 996 1066 994 1071 0.95
2 3 6.2e-32 7.2e-28 96.8 0.0 3 77 1471 1546 1469 1548 0.96
3 3 3.8e-31 4.4e-27 94.3 0.0 3 76 1733 1807 1731 1810 0.96

Sequence Information

Coding Sequence
ATGAAGGGTTGCACTGAGAAGATGCATCATCAAGTGCACCATGGATGCATGTTCCAAGCACTGCAACGCGCTACCCTTGCCGAGAAGGAGGTAAACACACTCAAGGAGCAACTATCCACTAATTCACCCGGCAGCAACATCGACAcaaccagcgacaacaactcgacaacagcagcagccagcgcAGCCGCCAACGACGAggatcatcagcagcagctgcagctgaaCGATAGTGACAAACTGCTAAACAGCTCGATTGTTGCGGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACCAATACACCATCGCCATCGCCACCGTTGCTGAGCgccgagcagcagcaacagttgcaGAGCAGCCTACAGAACGGTGGTGCGGTTGGCGGTGCTTGTCTCAATCCCAAGCTCTTTTTCAATCACGCCCAACAAATGATGATGGAGGCGGCAgccgcagcggcagcagcagcggcagcagcagctgtacAACAGCAGCAATCGCCACTCCGTTCGCCGTCAGCTGATGTGAGTGGTGTTGAGGCAGCTGCTGGCGTTGGGGGTGTAGGCGCAGAGCAAACGGCAGATGTGgcccacagcaacagcagcagcagcaacaacaacaacagcagcaacaacaatgagcAGGCTGACGATgacgaagaagaggaggaggaggaggaggaagaggaggatgaggaggaggaagacAATTCTTCGCTGCAATCGAATGCAGATGAAATGGAACAGGAGGCAAGAACtgacacagcagcagcagcagcagcagcagcaacagagaatgcagttgctgctgccctGGTGAATGAGGATGACGAGGCGGAcctggatgatgatgatgaggcggaggaggcggaggctAGTTTAAATGTTAGCAATAATCACAATAACGATAGCAATAATAGTTGTAGTCGAaagaacaacagcagcaacagcaacaacaacaacaacagtggcAACAGTGTGGCACAGCGTGATAATAATGATAATGAGCCACATGTGGAGGATGACTTGGACTGCACCAACAACAATActaacaccaacaacaacaacaacaacaacaccaacaagagcagcagcaacgagAAGCGCAAGaagcgcaacaacaacaacaatcagccTGCTGTTTTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAACTGCAGCGCCTGCGTGCCCTGGAACAAACTCATCTGGTACAAATTCAACGACTTGAGGAACATCTGGAGGTGAAGCGACAGCATATCATGCGACTGGAGGCCCGTCTCGATAAGCAGCAGATCAACGAGGCTCTGGCCGAGGCCACCGCCTTGGCTGCTGCCACCattacaaataataataataacaataacaacaataacaatagtAATAATAGTGGTCAGAACAaggacaacagcaacaacagtgCAAATGAACAAACAGTTGCCGTTGAACAGCTGGagccggcagcagcagcagcagcagcaacagcaacagcagcagcagtagccaTGCTGGTGGAtggcgatgatgatgatgatgaggaggaggatgagcagcagcagcagcaacagcagcaggaaaCTTGTACTGATCGTGCCGCTGAacaggatgaggatgaggaagAAGACAACGATGAACAGGATGTGGTAATGTCCACCACCAATAACCATCCAATTGAGGGCAATgagttgaaaatcaaaaaggaaCAGCACAGTCCCCTCGATCTGAACGTGCTGAGTCCACAATCGGCCATAgccgctgcagctgcagccgccgctgctgccgcctgtGCCAATGATCCCAACAAATTTCAGGCTCTTTTATTGGAACGCACCAAAGCTTTGGCCGCGGAGGCTTTGAAGAATGGCGCCGTTGCCGCTGCAGCCGCTGCAGCGAGCGAGGAAAAGACGCTCGCAGCTGCCGAGGAAGCAACCAAGAATGAAGCGGCCGAGAAAGCTGCTAGTGctgagcagcagcatcagcagcagcagcaacagccgccGCCGCATGCAACGCTCGAAGAGCAGCTGGTCAACAGCTATTGGAGACGCGGCTTCGAGGCGAATGGCAGCAAAACGCCAACAATTTATCAAAATTCGCTGCCGCCTCCACTGCCGCCgccagccacagcagcagcagtagcagcagccaCTCTTACCACCcctcagcaacaacaacaacagcaacaacaacctcaACATGGACCCTCGTCCACCGCTTTGCTCAGTCAATTGGTTAACTCAACTTTCTCCCACCCTTCTCGCCTAGATGCCGGCAACAGCcatcaccagcagcagcagcagcatcagctcCACCATTcgcacaacagcagcaacaacagcagcgccagcagcagcagcaacaacagcagcaacagccaccaGAACCAGAGCAACTGTCCCTCCGGCACACCCCAggccagcggcagcagcagcgacatcCTCAACCATGTTGGCCACCATCCCGTCGGCCACCATCATTCCCATCACGGCCACAGCCAGCTGTTGCACCAGGCCGCGGCCGCAGCCGCCGCTGCCCACCAGTTCGATTCCAATTCCTCAACCAGCTCGACCAGCACACCGAACAGCACCGCCCAACTGGCCGCCAGCATAGCCAATAGCAGCAAATCCCTGCTCCAGGcggccgccgctgccgccgccgaggacaacaacaacagtttgaCACCCAATGCAAACgcggccgctgctgccgccgccatgGCCGCCCATGCCCAGCATGCCGTTGCCCTGGGTGCGCCCAGTTTCTTGCCGTTCCAGTTTGCCGCTGCCGCAGCGGCCGGACAAGATGCGCGTGCACATTACCGTTTCGCGGATGCGGAACTGCAGCTGCCACCGGGCGCTTCGATGGCCGGCCGGCTGGGTGAGTCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAGGCACTGGACACGCTGCACATATCGCGGCGGGTGCGCGAGTTGCTGTCGGTGCACAACATTGGCCAGCGTCTGTTTGCCAAATACATTTTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGTTGAGTAAACCCAAGCCCTGGGATAAGCTAACGGAGAAGGGACGGGACAGTTATCGCAAAATGCATGCCTGGGCGTGTGATGATAATGCGGTGATGCTGCTCAAATCGCTGATACCCAAGAAAGATTCTGGTCTGCCTCAATATGCGGGACGTGGAGCTGGCGGCAGTGGCGGTGATGATTCCATGACCGAGGATCGCATTGTCCACATCCTAAGTGAGGCCTCCTCGCTGATTAAGAATAATGTGGCAGCtgtccagcagcagcagcagcagcaacagcaccagCATCAGGATACGCACAGCAATGAGGATAGCAAATCGCCACCACAGAGCTGCAGTTCACCGTTCTTCAAGGTGGAGCAACAATTGAAGCAACAGCATCACAGTGCCGAGCATAGGGATCAGCGTGATGCAGTGGTGGCGGctgcacagcagcaacagcagcgagAACAGCGCGAGCAGAGGGAACAGCGCGAGGCGGCTCAgcgggagcagcagcaacgttTGCGTCAGGAGGATTTGGCACAAGATAAGATGGCACGTTGGTATCAGGAGCTAATGGCAAGGCCTCGTGAGGCAGCATTTCCCAGCTTTCTGCTGTCGCCCTTCTTTGGTGGTGCCGCCGGTATGCCCGGTGCTGGCAATGCCTTTCCCGGTGCAAATGCATTCCCCGCGGCCATGGCCGCCGATGAGAACATACGCCATGCTTTCGAGCGTGAGATAGCCAAActccagcagcaacatcagcaacagcaacaacagcagcagcaccagcaacagGCCGTTGCCGGTTTCCCCCTCTCCAGTCTGATGGCCTTGCAGCAGCAAGTGCTCAATGGTGCTCAGGACCTATCGCTGGCCGGCAAGGATATCAAATTGAATGGACAACGAGCCTCATTGGATCACAGTAGCAGCAGCTCCAAagatggcgaccgtgacgatAGTTTCCCCTCATTGCATGGCCGTAAGTCGgaaggcggcggcggtggtggtggcaaCACACCCGCTCCGCCCGCACCGCCGGTGCTAACAAACGCTTCCAGCGGCGCCAGTGGCAATGCCCCAGCTCCAGCTGGTGCCAGCAACTCGGCCGCGCCCAGCCCCCTGAGTAATTCCATTCTCCCACCTGCTCTAAGCAGTCAGGGTGAGGAGTTTGCGGCCACCGCCAGTCCCTTGCAGCGCATGGCTTCCATTACCAACTCACTGATCACTCAACCCCCGGTCACGCCGCATCACAGTCAACCCCAAAGACCCACCAAGGCGGTGCTGCCGCCAATTACCCAGCAACAGTTCGATATGTTCAACAATCTCAACACGGAGGACATAGTGCGTCGGGTGAAGGAGGCTCTGTCGCAGTATAGCATCTCGCAGCGCCTGTTTGGCGAGTCGGTGCTGGGCCTGTCGCAGGGTTCCGTGTCCGACTTGCTGGCCCGACCCAAGCCCTGGCATATGTTGACCCAGAAGGGACGCGAGCCCTTCATCCGCATGAAGATGTTTCTGGAGGACGAGAATGCGGTCCACAAGCTGGTGGCCAGCCAGTATAAGATAGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATTAGTCAGGGACTGGCCAGTAAAATGCAGGCGGCTTCGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCCCAGGCCCAGCATATAATGCAGCAGATGCAGGCGGCGGCCATGTCGGCGGCCATGCAACAGcaggtgcagcagcagcaggcgcagcaggcacagcagcaacagcaccagtcgcaccagcagcaacagcaccagCAGGCAGCCCAGGCGGCTgcggccgccgccgccgcactGCATCACCAGAACATGCTGCTCACCTCGCCCGGCCTGCCGCCCCAGCATGCCATCAGTTTGCCCGCCAATCCGGAACAAGTGCGCGCCAATGCCAATGCCTCCGGCAGTGTTTCCTCCGGCGAGGAGAAGAAACCGATGCTGATGCCGGTGCACAGCGGAGCGCATCCTGCCAATGCCATGCGCAGCCTGCACCAGCACATGTCACCCACCGTCTATGAAATGGCCGCCCTCACCCAGGACCTGGACACACACGACATCACCACCAAAATCAAGGAGGCTCTGCTGGCCAACAACATAGGCCAAAAGATTTTCGGTGAGGCCGTGCTGGGCCTCTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAGCCCAAGCCCTGGCACATGCTGTCCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGCTCAAGAACGAGCGCAGGGAGGCCAGCAAGCGGCGACGCAGCACTGGGCCCAACCAGCAGGACAACAGCAGTGATACCTCCAGCAATGATACCAATGATTTCTACACCAGCTCCCCGGGACCCGGTTCGGTGGGCTCCTCGGTGGGCGGGGCACCGCCCAGCAAGAAGCAGCGCGTGCTCTTCTCCGAGGAGCAGAAGGAGGCCTTGCGTTTGGCCTTCGCCCTGGACCCCTATCCAAATGTGGGCACCATAGAATTCCTGGCCAACGAGCTGAGTCTGGCCACACGCACCATAACCAACTGGTTCCACAATCACCGCATGCGCTTGAAGCAGCAGGTGCCGCATGGTCAGCCGGGCCAGGACAATCCCATACCCAGTCGTGAGAACACCAACTCCACACCCTTCGATCCCGTCCAGTTTCgcttgctgctgcagcagcgtcTGGTAGAGTTGCACAAGGAGCGCATGGGTCTGGGCGGTGCACCCATACCCTATCCACCCTACTTTGCGGCGGCTGCTCTGCTGGGACGCAGCTTGGCGGGCATACCGggagcggcggcagcagcgggagcagcggcagcggctgcAGCGGTGGGCGCTGTCGGCGGTGATGAGCTGCAGGCCCTGAACCAGGCCTTCAAGGAGCAAATGAGCGGTCTGGACTTGTCCATGCCCACCCTGAAGCGCGAACGCAGCGATGACTATCAGGATGACATGGACCTGGAGGGGGTGGGGAGTCGTCATATGAGTGACAATGAATCGATGGAGGGTCCCGAGGGCGAGTCGCAGCCTGACTATGAGAAGGCGCTGCAGAAGTCGGCCCTGGCCTCGGCGGCGGCCTACATGAGCAATGTGGTGCGCAGCTCGAGGCGCAAGCCGGCTGCACCGCAATGGGTGAACCCGGCACAGACCACTCCAGGCGCCGTAAGCGAGGCCGAGCGCATTATCAATGGTGTTTGTGTGATGCAACCCTCGAACTATGCCAGCGAGGAGTCCGAACAGAAGGCAGACTCGGTGGTCAGTGAAAACGAACCGGAGATCGATCATCGTTTCATGGAGCCGGAGGTGCACATAAAGCAGGAGGACGatgacgaggaggaggagcagcaggagaagACGGTAGAGTCGGCGGACCTCAAGGTGATCAATGAGGAGAAGCTGCGTCTGGTGCGTGTGCGTCGCTTGAGCAGCAGCAATGGCGGCGCAGCGGTGGCCACGGGCGAGTCCGAGGAAGCGCCGGCGGTGACCACAGCCGGCTCCTGGAATTACTAG
Protein Sequence
MKGCTEKMHHQVHHGCMFQALQRATLAEKEVNTLKEQLSTNSPGSNIDTTSDNNSTTAAASAAANDEDHQQQLQLNDSDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGGAVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAVQQQQSPLRSPSADVSGVEAAAGVGGVGAEQTADVAHSNSSSSNNNNSSNNNEQADDDEEEEEEEEEEEDEEEEDNSSLQSNADEMEQEARTDTAAAAAAAATENAVAAALVNEDDEADLDDDDEAEEAEASLNVSNNHNNDSNNSCSRKNNSSNSNNNNNSGNSVAQRDNNDNEPHVEDDLDCTNNNTNTNNNNNNNTNKSSSNEKRKKRNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAATITNNNNNNNNNNNSNNSGQNKDNSNNSANEQTVAVEQLEPAAAAAAATATAAAVAMLVDGDDDDDEEEDEQQQQQQQQETCTDRAAEQDEDEEEDNDEQDVVMSTTNNHPIEGNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGAVAAAAAAASEEKTLAAAEEATKNEAAEKAASAEQQHQQQQQQPPPHATLEEQLVNSYWRRGFEANGSKTPTIYQNSLPPPLPPPATAAAVAAATLTTPQQQQQQQQQPQHGPSSTALLSQLVNSTFSHPSRLDAGNSHHQQQQQHQLHHSHNSSNNSSASSSSNNSSNSHQNQSNCPSGTPQASGSSSDILNHVGHHPVGHHHSHHGHSQLLHQAAAAAAAAHQFDSNSSTSSTSTPNSTAQLAASIANSSKSLLQAAAAAAAEDNNNSLTPNANAAAAAAAMAAHAQHAVALGAPSFLPFQFAAAAAAGQDARAHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGSGGDDSMTEDRIVHILSEASSLIKNNVAAVQQQQQQQQHQHQDTHSNEDSKSPPQSCSSPFFKVEQQLKQQHHSAEHRDQRDAVVAAAQQQQQREQREQREQREAAQREQQQRLRQEDLAQDKMARWYQELMARPREAAFPSFLLSPFFGGAAGMPGAGNAFPGANAFPAAMAADENIRHAFEREIAKLQQQHQQQQQQQQHQQQAVAGFPLSSLMALQQQVLNGAQDLSLAGKDIKLNGQRASLDHSSSSSKDGDRDDSFPSLHGRKSEGGGGGGGNTPAPPAPPVLTNASSGASGNAPAPAGASNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQISQGLASKMQAASLPMQKMMNELKLQEPAQAQHIMQQMQAAAMSAAMQQQVQQQQAQQAQQQQHQSHQQQQHQQAAQAAAAAAAALHHQNMLLTSPGLPPQHAISLPANPEQVRANANASGSVSSGEEKKPMLMPVHSGAHPANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNSTPFDPVQFRLLLQQRLVELHKERMGLGGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAVGAVGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDMDLEGVGSRHMSDNESMEGPEGESQPDYEKALQKSALASAAAYMSNVVRSSRRKPAAPQWVNPAQTTPGAVSEAERIINGVCVMQPSNYASEESEQKADSVVSENEPEIDHRFMEPEVHIKQEDDDEEEEQQEKTVESADLKVINEEKLRLVRVRRLSSSNGGAAVATGESEEAPAVTTAGSWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00914288;
90% Identity
iTF_00914402;
80% Identity
iTF_00917098;