Basic Information

Insect: Lordiphosa collinella
Gene Symbol: rfx7.L
Assembly: GCA_018904265.1
Location: JAEIFV010000776.1:75223-83223[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.5e-33 6.9e-29 100.5 0.1 3 78 297 372 295 373 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.5e-33	6.9e-29	100.5	0.1	3	78	297	372	295	373	0.97

Sequence Information

Coding Sequence: ATGTCCGAGAAGCATCAGCATGGCCAGCTTGGTGCCCAGTGGACGAAATCAGCGGCGCCAACAGCTTCAACTCCACTCCAGAAACTTGCGCCACCAGCTTCTCCGTATGGCCTGCCTGGATTGGGTGGCTTGCAGCCAGGGGATGTACCCAACTATCCATCTGGTCGGTTCCAGGCCCCGCCCATTCTGGCAAACGTCGCGAGCAAGGCCACGCCATTGACCATTGTGCCAGTGCCAGGAGGAGCTCCTGTCCAAGGCTCACCCACGCCTCCCCACACAAATGTACCTGCCCTAGCTGCTCCCAGTGGCTTTGTACCTCCTCCCTTTCCAAATGCAAATGCTGCTGGTGCCACAGCAGGAGCAGGCGGGAGTGGGATCGGCACATCCGTGCTTCAACCAAATCCCTTTGCAACTGGAGCTGGGAATGCAGCTGGTTTGGCCTTTGTCAATGCTGCTTTTAACTTTAACCCCGCACAGCAGCTGGAGCTGGGTAAGATTATGCACGCCATGAATACTTCGGGAGCGGGAACTCCGACTGCAGTCACAGCTCCTCCACCCGCAAGCGCCGCTGCTGCTCCGCCCCAAAGACATCCTAGCGAGAGTATAACTACACCAGCCAGTGGAGTCATCAATTCCACCATAGCAGAGAATGTAATGACTGCCATGGCTCACTCCGGTTCTGAAGAGAAAATGCGACGTGTTCAGCAGGTGATCGAGACCAGTATAGACGACTCTGCCAAGTTGCAAATTTCTCAGATTCTGGACCGAGTGGGAGGCTTGAAGCCTATAGAAAAACTTTTTCTGTATTTGCGCCTTCCAGGCGAGAGTGCTGATTCGGATCCCCTGAGGCAACCCCAAAATCCGCTAGGTACACGCTCGGAAATCAATCACACCATCAACTGGGTACGTTCCCATTTGGAGCATGATGCCCAAGTGTCCATACCTAAGCAGGATGTTTACAATGATTATATAGCCTACTGTGAACGTTTGAACATTAAGCCGTTGTCCACGGCCGATTTTGGCAAAGTGATGAAACAAGTTTTTCCCGGTGTGCGTCCACGTCGCCTGGGAACGCGTGGCAACTCACGCTATTGTTATGCAGCCATGCGAAAGACCACCAAGTTAACGCCGCCACAGTTGCCCCAAGTGACTAAGGTGGAAGTGGAGGATATTTCTGCCCTTCAACTAGGCAATTCAGCTAGTCCAGGAGGAGGAGCGGAAGCAGGTGATGACAACTGGCCGGTGATTCGCAGCTGGGCAGAAAAGTTGCTCAACACCAAACTGGATAGCATCACAGAGCTGGCTACCCGCATACGAAGCAACAATGCTAACGTTGTGGCAAACCCTCCATTAAATGCAAAAAAGTACACACCCAGAGAGCCCAAAGAGAAGCGTCTAATGGCGGACATGGGTCCCCTGAAGAAGCGACGCAAGAAGAAACGCAAAGGTTCCACCTCTTCAGAGTCATCCAGTTGCAATCAGTTGACCCATCAGCAGGATGCAGGCAGCAGTCAAGAGGCCACTCAGGTTGAGATGAAGATCAAGCAGGAGGTACTGGACTCACCCATCCAGCCTCAGCAGCAGCTACAGACCCTCAGCTATCAACAGCTGCTGCCCATGAACTTGGTCACCGCTGAGCCAAGAGGCAGCAACAACAATGCCGCCGTGCGCAATTTAACGCCCAAGATCATGGAGATGGCAACTTCGCCAGCCGGTGCTGTGATTAAGGACGAAGTGGACACCGAGGAGTACAATACCTCTAACATATTTTGTAAGAAAGTTTTAAAGGCTCAGCAGACCAAAGGATTCTGGGCCAACTCGCCTAGCAGTGGATCCACAGGTGGAGGTACTTTGCTAGTGCCGCCTGTTATCACCACCACCTCGGCCACTCCACCACCACCAACGCAGGCTGCTGGAGGCAGCGGCAGTTCGCCTGGACTATCTATGGGTCCGCCCATGCAACTAAATAATCCCAGTTCGGTGAGTCCATCGAGCAGTCTGACTGCCGACCCCACAATTACCATCACACCCAAAGTGGCCTCACGCAACATGATGCTTCTGCGGGCCAAGCGCCTGTTGGCCGCCGAAAATGCGGCCGCTTTGGCTGCCGCTGCCGAGGTAGCTGATCTGCCCGAAAACTTGGGCTTGCCCCGCGAGCGGGTGATTAGCATCTGTAATATGGATAAACACGAACTCGATGATTACTTTCTGCCTGGCGAGGTAGAGGATGAGAACTCGGAGGGACCCGATACCGAGCTGCTTCAATATTTTCAGATGGGAGACGCTGAGGAAAAACAACTGAATTCCTTGGATGCTCTAGAACAGAACAGAAATCCACAACAACAAGACGCGCTGGCGACTGGTGGAGTGGCAGTGGGAGGATCAGCAGCAGCTGCCGCAGCCTTGGCCATGCCCTCGCCCCAGGGATTTAATCAGTCCAGTCAAGCGAATGTGGGTTCTGCCTCAGCGTCTCTGGCTTTAATGTCACGAAAGCATCAACAACTGCAGCAGCAGCAACGATTCAACAACAACCACAACAAGAGAAAGATTAGCCTAAGCAATGCTTCCAGCAATGGCAGCAACAAGAACTGCATCTTTCTGCCCATCTCGCCCAACATCAATAATAATGGAGTAGCAGGAGCTGCAGCAGCAACATCTGCGGCCGGCGCTGGATCAGAAGCAGCTGCCCAACAAAATTGCTTTGCTAGTCCTGGTCTGAGTCGCATGATGCGTCAGCGCTCTCAACTCCTTACCAAACAGCAATCCCTGGACTTTGATAATGGCGGTGATCCCATGATTGGAGCGCATCGTAAGAGACGTAGCTATGTCTATAGCTATCCCACTAGCACCTCGGCCTCGGCACCGCCCAGTCCGTCGCTTTTACAACAATGCATGGCCTCCAATTGGACCAATTCCTCCAATTTTCCAGAGAACTCCCATGTGGATCTATTGGTAAATCAGAATTCCATGGACTTGGAGACCAGCTTGGCTTTGACTGGTGCAGGAAGTGGCGATGATTTGGAGCTCACAGAGATTCAGCGTTCCCAATCCGTGCCCTTGTCCCAGCTGCAAAGGACAAGTCCCAATCTCAACAGCTTCAATCGTCAGGCAAGCTTTCAGGCTTCCAGCTTCTACTCGGAGAACAGCAATAGTCAGCAATCTCTGGTGGCAGCACCCCTCAAAGATGTCGATGTGGATGTGTCCACGGGTTTGCTCTACGAGGGCGTTGATGTGAGTGCCTTGATCTCGCCCAGTTTTCATAACAAATTCAACCAGCAAACGGCCAACACCTGCAGTTCCTCGGCCGGTTCGTCCTCCGGCTATAGCAGTGGCAGCGGTGGTGGCGGAGGTGCCATTGCTGGCATAGTTTCCCGTTCAGTTCCCTCCACACCGCTGCCACATCAACAGCAACTAGGTCTAACGACCTCTAATGGAGCAGCTAATGGATCTGGTGGAGGTGGCAGTTGCAGTGCGGCCAACGGTTTCTTCAACATCTCACCGGCCTTTAATTGGGGCAGCAACCAGATGGCCAGCTCTTATGGTGGAGCCACACAATCATACAGTGCCCGCAATGCTTTGGATATATCCAAGTCTATGCCAACCACGCCCATAACCACGCCCTGCTTTCGTTATAGTCCGGTTGAATTGCATCGCGATTTTCTCATCAATGGCAATACCATAGATAGTCTGCCCTCAACTAGCGCTTTTGGTAGTGCAGCCGCAGTGGCCGTTAGTGGAACGGATTCCTTAATCGACGACAGTGTGCCCAGTAGCACAGATGTGGTGGAGGCCATGATTGGTTCCACCGATATACTCGATAATTTGTAG
Protein Sequence: MSEKHQHGQLGAQWTKSAAPTASTPLQKLAPPASPYGLPGLGGLQPGDVPNYPSGRFQAPPILANVASKATPLTIVPVPGGAPVQGSPTPPHTNVPALAAPSGFVPPPFPNANAAGATAGAGGSGIGTSVLQPNPFATGAGNAAGLAFVNAAFNFNPAQQLELGKIMHAMNTSGAGTPTAVTAPPPASAAAAPPQRHPSESITTPASGVINSTIAENVMTAMAHSGSEEKMRRVQQVIETSIDDSAKLQISQILDRVGGLKPIEKLFLYLRLPGESADSDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLNIKPLSTADFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQVTKVEVEDISALQLGNSASPGGGAEAGDDNWPVIRSWAEKLLNTKLDSITELATRIRSNNANVVANPPLNAKKYTPREPKEKRLMADMGPLKKRRKKKRKGSTSSESSSCNQLTHQQDAGSSQEATQVEMKIKQEVLDSPIQPQQQLQTLSYQQLLPMNLVTAEPRGSNNNAAVRNLTPKIMEMATSPAGAVIKDEVDTEEYNTSNIFCKKVLKAQQTKGFWANSPSSGSTGGGTLLVPPVITTTSATPPPPTQAAGGSGSSPGLSMGPPMQLNNPSSVSPSSSLTADPTITITPKVASRNMMLLRAKRLLAAENAAALAAAAEVADLPENLGLPRERVISICNMDKHELDDYFLPGEVEDENSEGPDTELLQYFQMGDAEEKQLNSLDALEQNRNPQQQDALATGGVAVGGSAAAAAALAMPSPQGFNQSSQANVGSASASLALMSRKHQQLQQQQRFNNNHNKRKISLSNASSNGSNKNCIFLPISPNINNNGVAGAAAATSAAGAGSEAAAQQNCFASPGLSRMMRQRSQLLTKQQSLDFDNGGDPMIGAHRKRRSYVYSYPTSTSASAPPSPSLLQQCMASNWTNSSNFPENSHVDLLVNQNSMDLETSLALTGAGSGDDLELTEIQRSQSVPLSQLQRTSPNLNSFNRQASFQASSFYSENSNSQQSLVAAPLKDVDVDVSTGLLYEGVDVSALISPSFHNKFNQQTANTCSSSAGSSSGYSSGSGGGGGAIAGIVSRSVPSTPLPHQQQLGLTTSNGAANGSGGGGSCSAANGFFNISPAFNWGSNQMASSYGGATQSYSARNALDISKSMPTTPITTPCFRYSPVELHRDFLINGNTIDSLPSTSAFGSAAAVAVSGTDSLIDDSVPSSTDVVEAMIGSTDILDNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00916932; iTF_00918789; iTF_00917800; iTF_00919611; iTF_00914236; iTF_00915071;
90% Identity: iTF_00914236;
80% Identity: -