Lclr001509.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- Bro
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000005.1:54570-55201[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-43 6.3e-39 133.4 1.4 1 91 39 125 39 127 0.97 2 2 1.1e-06 0.0068 16.2 0.6 123 152 127 156 126 163 0.91
Sequence Information
- Coding Sequence
- ATGCATCATCATCAGAATCTTGGCGATCCAACGTCTCCTCTAAACGGCATGCTGCCGCCGCCCTACGAAACAATGGCCCTATACGAACAACCCAAGCCTCGGTTTATCTTTAAGATGCCACGCGTAGTGCCGGATCAAAAATCCAAATTCGAAAGCGATGAACTATTTCGTCGTCTTGGCCGCGAGAGTGAGGTGCGCTATACTGGCTACCGGGAAAGATCTATGGATGAGCGAAGAATGCGATTTGTCAACGATTGTCGTAAGGGCTATGCTGAGCTGTCCTTTGTAGCCTCGGGCACCAATATTCAGCTATATTTCAATGCCAATCACAATCCCTATGCCCAGGAGCAGGAATGTGACTTCGAGAGAGAGCCTGAAAGTTTGGAATACGATGAAGGACGTGCCCTGCAGGAGGATGCACAATTGCGTGAACAAGTGGAGAGTTACAATCAACGCATGGCCGAATCGAAACGTATTTATGCCCCAACACCACCCGAGGATCCCATACGTCGATTGGGACCTGGAGGTCCAATGGGTTGGTAG
- Protein Sequence
- MHHHQNLGDPTSPLNGMLPPPYETMALYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLGRESEVRYTGYRERSMDERRMRFVNDCRKGYAELSFVASGTNIQLYFNANHNPYAQEQECDFEREPESLEYDEGRALQEDAQLREQVESYNQRMAESKRIYAPTPPEDPIRRLGPGGPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -