Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010002967.1:414095-448069[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.75 47 5.0 2.0 3 23 275 297 273 297 0.92

2 14 2.3 1.4e+02 3.4 1.0 3 21 435 453 433 457 0.92

3 14 0.023 1.5 9.7 0.2 2 23 479 501 478 501 0.90

4 14 0.62 39 5.2 0.9 1 23 518 541 518 541 0.95

5 14 1.8 1.1e+02 3.8 0.2 1 21 546 566 546 570 0.89

6 14 0.039 2.4 9.0 0.1 1 21 625 645 625 646 0.94

7 14 1.7 1.1e+02 3.8 0.1 3 23 667 687 665 687 0.93

8 14 0.00028 0.017 15.8 4.2 2 23 700 720 699 720 0.97

9 14 2.5e-05 0.0016 19.1 1.7 1 23 726 749 726 749 0.97

10 14 0.00013 0.0085 16.8 0.3 1 23 775 797 775 797 0.97

11 14 3.1 2e+02 3.0 1.0 1 23 805 829 805 829 0.94

12 14 0.018 1.1 10.1 3.5 1 23 834 858 834 858 0.97

13 14 0.22 14 6.7 5.8 1 23 868 890 868 890 0.95

14 14 0.0047 0.29 11.9 4.8 1 21 896 916 896 921 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.75	47	5.0	2.0	3	23	275	297	273	297	0.92
2	14	2.3	1.4e+02	3.4	1.0	3	21	435	453	433	457	0.92
3	14	0.023	1.5	9.7	0.2	2	23	479	501	478	501	0.90
4	14	0.62	39	5.2	0.9	1	23	518	541	518	541	0.95
5	14	1.8	1.1e+02	3.8	0.2	1	21	546	566	546	570	0.89
6	14	0.039	2.4	9.0	0.1	1	21	625	645	625	646	0.94
7	14	1.7	1.1e+02	3.8	0.1	3	23	667	687	665	687	0.93
8	14	0.00028	0.017	15.8	4.2	2	23	700	720	699	720	0.97
9	14	2.5e-05	0.0016	19.1	1.7	1	23	726	749	726	749	0.97
10	14	0.00013	0.0085	16.8	0.3	1	23	775	797	775	797	0.97
11	14	3.1	2e+02	3.0	1.0	1	23	805	829	805	829	0.94
12	14	0.018	1.1	10.1	3.5	1	23	834	858	834	858	0.97
13	14	0.22	14	6.7	5.8	1	23	868	890	868	890	0.95
14	14	0.0047	0.29	11.9	4.8	1	21	896	916	896	921	0.93

Sequence Information

Coding Sequence: atgaaTTCAGATTTGGATGACTCACATTTGTGCATCAAGTGTAATGCCACCATCCTGGGCCTTGAAAAGTATATTGAACATCGCAAACAGAATTGTATCATATCGGGCAAATCAACAGACAGTACCAGTACCAGTAGCACGGTCACCACGTCCACCACCCAAGTATCCCCTACCTTGATCAGTCGCCCCTCTCtggatcattcctatgacagctttcACTTTACCGAACCGGAGGCTCCCAGTAGTTATCTGCGTAAAACCGCCGCCAGTCATGGCGGCAAAACTTCCAAATCTCTTACTGAAGCCTACGATCTTACATATGAACTGGGAGCAGATGTGTTTTTCTCATCCCTACAATTGCAGAGTGTTTCCACAGGCGGCAAGACAGTGCGTGAGAGACCCAAGGAAGAAGGTTGGCCTGCATCCCGTGGAGATCCTGTCCTGAAGGCTGTAAGAGATCAAGACGAGGCTGTTTACAAACCACTCAATTTTGTGAACGACTCACCCGAGGCCagtgaggaggaggaggaggacgaggAACCCGAAGACTTTGATAACGAAGAAGATGAATTGGAAGAGGATTATGTGCCCACGGTGCCAGCTACTCACACCGGTGGCAAATGGAAGCCTGAACACCGTCCGCAACTAAGGCACACACACCTGGAACGGCTCTCTCCCAGCTGGGATGAGCCGGTCGAGGAAAACTATGCACATCCACCGGCCGATCATACCAAAGGAAAATGGGTGCCCGGTAGCAAGCAATTGGAATATCGTGAGAATATAGATCTGACCAAGCTGGAGGAGTTAAGGGCCAGCTATTGGTGCAACATCTGTTGTAGGCGCTTAAAGAATCGAGTGAACTACGAGCAACATCTACGCAGTGCCTACCATTTGAAGAGAGCCGAGACTGAGTGTCAGCTGGAGCAGGCTACTCTAGGTGATCGGCTTACCTTAAGCAAAGACTTTAGTCCACCACAACCCACTCCGGGCAAACTTACCCAGGGACGGCAGCGTCGTGCCAATCTGTTGCGTTGTGAGCTCTGTCGACATAGTCTAGCACGTCATTTGATGGGTAAACACTTGATCTCTCACTTTCACTATCGCAAACTACAGCAACAGAACCAGACACGTCGTCAGAACTCACTGCAGGACATACTCACCCACATGACCAGCATAGTGAAACAGTCGCCATTTCAGTGTCTACCATGCCGATTTTATGCCAACACCGAGGAGACCTTTCTACAGCACTGGCAATCCCTGGAACATGAAAAGCTTACGAATCGTCTGGGTGGTACCTTCTGGTGTGAATATTGTCAGTTTGAGTGTGACTCAAATGAGTCCATGTGGCAGCATTTGCTGGACTCTAACCACAAAGAGGTGCTGCTGGCTCTCAATCGTTCCGTACCCATTTGTATAGCCCAGAGAACTTATATTTCGTGTGAAGAGTGTGGCATGCGGTTTCTATACAATGCTCAACTACGCAAACACTTCGAGTTGGACCATCCTGGCATAGAAGCCACCGGCACCGCTGCCGAGGATTATCAGTGTCAGTTTCGTTGCGGCCTTTGTGATGCACCTCAACGTTCACGGGTGGCCCTGCAGCGTCACGAGAAGCATAAACATCGTCTTTCGAGATACTTTTGTGCCATTTGTCGCTTGGAATTTGACAATGCTCTGGAAGCTCGACGGCATCGTAGTCTTATGCAGCACAAACTGAAGTCAAAACCCAGAAATACCACCACCTCCACGCAGCCAGAGCAGGAAATAGAGCACCTCTTACGAGAGGTGCTTGAGGAACCAGTGCCAACTGTACCCGTTCCCCACAAAAAACCACGCACTACCTCCTCCTCGAATCAACAGTCTGATCAATCATATATTTGCCTCAGTTGTGGTGTAAGTTTTCAAACCGCTCAGGCTTTGGGTCGTCATACACGTAGCTGTCAGCCCATAGCCTCTACTTCCCAGCAATGCTCCTCCTCTCTAACCAAGTCTTGGGCCTGTGATCAATGCGACTTTAGTGCCCAATACGAATCGGATCTTATCTACCATCGTTTCCTTCACAATCGATCTACAGGGATAGGCAAAAATGAGCTGCTGCAGTGTCCTTTGTGCCCCAAACACTTTCGCAAGCATTCCCTTCGTGCCCATTTGCGTAATCATACCAACGAGAGAATCTTTGAGTGTACCGAGTGTCTGCTGAAATTTGCCCGGCGTCACAATTTAAAGAATCACATGGCCACCATACATGGAGGAGCAAAGCGCGAGCAGTCGGAGAAGGCAAAACCAGAAGTGAATATGGGAAAACagaagcaaaagaaaacatttcaatgTGGAATCTGTGGAAAAATATTGTCCAAAAAATATTCCCTTAACCTGCACGAGTTGAGTCATTCGGAGGGAAAGGAACGCAACTATCAGTGTCACATCGAAAATTGTTCGTACAAGGGATTGACAAGGGAAGGCCTGAAGACCCATTTGATATCACATGCCCAGGGCAGTCACAAGTGTAAAGAGGAGAATTGCGGTTATGTGGGCAAAAGTGGGCAGCATTTGAAAAGGCACCTCAAGTCCCATGtcaaggaggaggagcagtGTGTTTGGTACAATTGCGATCAGTGCGACTTCAAGACGCGTCTCAAGGGTCATCTTAAACGCCATTCCCTACATCACACCGGAGAGAAGCCACATAAATGTCCACATTGTGATTTCCAGTGCAGCACCATAGACAATTTACGCAAACATGTACTTAAAACGGGCAAACATCCGGGAAAATTTCTATATGAATGTGAGAAATGTCAGGAGGAGGAGCAAGCATTCAAGTGCAATAGCTATAGGGACTATCAAAAGCATTTGGTTACACATCTGAGAAACAGCCCCAAATAG
Protein Sequence: MNSDLDDSHLCIKCNATILGLEKYIEHRKQNCIISGKSTDSTSTSSTVTTSTTQVSPTLISRPSLDHSYDSFHFTEPEAPSSYLRKTAASHGGKTSKSLTEAYDLTYELGADVFFSSLQLQSVSTGGKTVRERPKEEGWPASRGDPVLKAVRDQDEAVYKPLNFVNDSPEASEEEEEDEEPEDFDNEEDELEEDYVPTVPATHTGGKWKPEHRPQLRHTHLERLSPSWDEPVEENYAHPPADHTKGKWVPGSKQLEYRENIDLTKLEELRASYWCNICCRRLKNRVNYEQHLRSAYHLKRAETECQLEQATLGDRLTLSKDFSPPQPTPGKLTQGRQRRANLLRCELCRHSLARHLMGKHLISHFHYRKLQQQNQTRRQNSLQDILTHMTSIVKQSPFQCLPCRFYANTEETFLQHWQSLEHEKLTNRLGGTFWCEYCQFECDSNESMWQHLLDSNHKEVLLALNRSVPICIAQRTYISCEECGMRFLYNAQLRKHFELDHPGIEATGTAAEDYQCQFRCGLCDAPQRSRVALQRHEKHKHRLSRYFCAICRLEFDNALEARRHRSLMQHKLKSKPRNTTTSTQPEQEIEHLLREVLEEPVPTVPVPHKKPRTTSSSNQQSDQSYICLSCGVSFQTAQALGRHTRSCQPIASTSQQCSSSLTKSWACDQCDFSAQYESDLIYHRFLHNRSTGIGKNELLQCPLCPKHFRKHSLRAHLRNHTNERIFECTECLLKFARRHNLKNHMATIHGGAKREQSEKAKPEVNMGKQKQKKTFQCGICGKILSKKYSLNLHELSHSEGKERNYQCHIENCSYKGLTREGLKTHLISHAQGSHKCKEENCGYVGKSGQHLKRHLKSHVKEEEQCVWYNCDQCDFKTRLKGHLKRHSLHHTGEKPHKCPHCDFQCSTIDNLRKHVLKTGKHPGKFLYECEKCQEEEQAFKCNSYRDYQKHLVTHLRNSPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00917645; iTF_00919509; iTF_00915831; iTF_00918659; iTF_00916788;
90% Identity: iTF_00917645; iTF_00916788;
80% Identity: -