Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010003214.1:237000-239923[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.1e-07 1.3e-05 25.6 1.4 1 23 204 226 204 226 0.98

2 16 0.0033 0.21 12.4 0.2 2 23 258 279 257 279 0.97

3 16 0.00063 0.04 14.6 0.6 1 23 357 380 357 380 0.96

4 16 0.02 1.2 9.9 0.7 1 19 387 405 387 408 0.92

5 16 0.01 0.65 10.8 2.1 1 23 417 439 417 439 0.97

6 16 0.0013 0.079 13.7 5.1 1 23 446 469 446 469 0.93

7 16 6.3e-05 0.004 17.8 1.4 2 23 477 498 476 498 0.96

8 16 0.0046 0.29 11.9 0.1 2 21 525 544 524 545 0.94

9 16 0.002 0.12 13.1 2.3 1 23 601 624 601 624 0.98

10 16 0.16 9.9 7.1 2.7 1 23 661 684 661 684 0.95

11 16 0.00017 0.01 16.5 1.6 2 23 714 736 713 736 0.95

12 16 0.00071 0.045 14.5 2.0 1 23 750 772 750 772 0.95

13 16 0.00022 0.014 16.1 0.8 1 23 778 800 778 800 0.99

14 16 6.1e-07 3.9e-05 24.1 1.8 1 23 806 828 806 828 0.98

15 16 8e-05 0.005 17.5 2.3 1 23 834 856 834 856 0.96

16 16 4.1e-05 0.0026 18.4 0.6 1 23 862 886 862 886 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.1e-07	1.3e-05	25.6	1.4	1	23	204	226	204	226	0.98
2	16	0.0033	0.21	12.4	0.2	2	23	258	279	257	279	0.97
3	16	0.00063	0.04	14.6	0.6	1	23	357	380	357	380	0.96
4	16	0.02	1.2	9.9	0.7	1	19	387	405	387	408	0.92
5	16	0.01	0.65	10.8	2.1	1	23	417	439	417	439	0.97
6	16	0.0013	0.079	13.7	5.1	1	23	446	469	446	469	0.93
7	16	6.3e-05	0.004	17.8	1.4	2	23	477	498	476	498	0.96
8	16	0.0046	0.29	11.9	0.1	2	21	525	544	524	545	0.94
9	16	0.002	0.12	13.1	2.3	1	23	601	624	601	624	0.98
10	16	0.16	9.9	7.1	2.7	1	23	661	684	661	684	0.95
11	16	0.00017	0.01	16.5	1.6	2	23	714	736	713	736	0.95
12	16	0.00071	0.045	14.5	2.0	1	23	750	772	750	772	0.95
13	16	0.00022	0.014	16.1	0.8	1	23	778	800	778	800	0.99
14	16	6.1e-07	3.9e-05	24.1	1.8	1	23	806	828	806	828	0.98
15	16	8e-05	0.005	17.5	2.3	1	23	834	856	834	856	0.96
16	16	4.1e-05	0.0026	18.4	0.6	1	23	862	886	862	886	0.90

Sequence Information

Coding Sequence: ATGAAACTAAGGTTACCCGGAGTGTGTCGCACCTGCGATGCAAGTGCCAGGGGGGCGAGAAAGCTGCTCAATCTGGACACGCCCAGCAAGGAGTTCCCTGACAAGTCGCTGGCGAGTATTCTCAGCGAACTGACTAATATCGATCTGCAAGTACCATTTGCTGAGAAATTGCCGCAATGCCTGTGCACCAGTTGCTCCAAAAGACTCGTCTCAGCCTTTGAATTTGTGAAGCAGGCTGTGGCTGCCAATGATTTGTTGATGGAGCATCTTAAAAAGACCTCATCCAGCAGCGATTGTTTGCTGGAGACGCCCATGGAACTATGCGCTGATTTACATCTagaattaaaaatggaaacgGAGGATGAAGAAGATTCTGCGGGAATCAAAGATATAACCTGCACAGAACTGCCCGAGTTGACTGTTAAGAATTCGGTGGATCCCTTGATAAAGCTGGTCAGCATAAAGCAGGAACCAAACGTTTCAGAGGAAGACCCTGAATACGACACACAAGACTCGGAGACGGATGACGAAGATTCTGAGGAGTACCAGCCTAGGGAAAAGCGAGTATCAAATCGAAACCAAACCATCATCAAGGAGCAAAAACGTAAATTCCAGTGCGCCGAGTGTCCAAAAAGCTTTAAACGTGCCGCGCACTTAAAACAGCATCTGAAAGTTCATGCCGATCCCAAGCCACCTGCCAGTGTCAGTGAACACAAAAAGGCCAAAGCCATTGATCTCAATCTGTGCAAGCCTCATGGCTACAAGCTCATCGAGTGTTTGATATGTCAGAATCAATTCAGTAAAATTGCAGATCTACGCCGTCATTTGGAAACACATCCGGAAGTTGTTACACTGGCAGGGCAGGAGCCGGTAGAGTTGGCTAAGCTGTTCTATCCCAATGCCAAGGATATCAGCGAAGAAGAACTGAGACAACTGATACATAAAGATTTGTCCAGTGGCCAGTATCAAAATTTCTATTCCATAACCAATCAACATGGATATGAGATGGGACTGGACAGTTCGGAGACGGAATGCGAGTCAGAAACTAAGGAGGAACCTCAAGTCAAATACAACTGTGAGCTGTGCCAGCAGGCATATGCAAGAAAGTATCAGCTTTACGATCACCAAAATCAAGCACATTCCTGGCTAGATGCTCCCCATGTGTGTGGCCGTTGTGATGCACGATTCGTTAGCCAACAGCTGCTCAGACATCACAATGAGACGCTGTGCCGCAATGTCCAGAAACGTTTCCACTGCCTCAAGTGTCCGTTACGCTTTCGCTGGAAACAAAATCTCAGGGCTCATGTCCGAGAGCACCGGAAAAATATCCAACTCCATGAGTGCCACCACTGCAAAAGTGTTTTTCGCAATaaaaaatctctcaccattcATCTGCTGGGTGTGCATGCCGAAGACTCCACGGTGCTGCCGTGCCAGTGGTGTAACCGCAAGTTCTTCCGTCAAGACTATCTGGTTAAGCATCTGAAACGGCATGGCTTAAGAGAACAGGACATTCCACTGGCCGAAACCATTATAGCGGCCACCTCCAAACCTAATGGAGTCAAGCGGATTAGCTGCAAAGTCTGTAATCTGCAGTTTGAGCGCATTTACGATCTGCGTGCTCACATACAGCAGGAGTTGATGATATCGAAGTCTTCATTGGCCTCCTCACTGCATCAAAACTACGACTCGCTACGTAACTATTCCATAACCAATGAATCCGGCTTCGAGCTGCAATTGGGAGATTCTGAGACGGAGGATGAAATGTCGGTTAACGGCATGGGACAAGCCCAATTGGTATACATTTGCGAGTTGTGTAGTCTTCAGTGCCGGCGCAAGTACGAAATGATACAGCACCAACGGACTGTGCATTGCTTTGACAAGATGCCGCATGAGTGCGACAAGTGTATCTTCAAGTGTGTGTCCAAGAGCATCATGGATTATCACCGGCAGGCGCAATGTGGCAGCTTAGAGAAAAAACATTCGTGCAGTCATTGCAGCTATAAATACATGTGGCCCGAGAATCTGGAGCAGCACATAAAACTACAGCATGGCCAATtaacgacgacaacaacaggAGAGCAACTGTCAACCAGTGAAAACTTGGCAGGGCCAATCAAGGAAGCGGCGTCGGTACTCCAATGTCCGCACTGCGATCGCACCTATCAAATGAAATCGAGACTCAACAACCATATACGGGATGTGCATGTTAATGGCGATCGCAAGCGTAAGGATGCCGTCAAGATGTTTCTGTGCTCGCTGTGTGGTTACAAGACCAATACTTCCTACCAATTGCTCACCCATACGCGTCGTCATACAGGCGAGAAACCTTTCAAATGTGATCTGTGCGAAGCTGCCTTTCCCCGGCACTCGGAAATGATATCGCATCGGCGCATGCATACTGGAGAGAAGCCCTTCCATTGCACCGTCTGTGGCAAGGATTTTGCACGAGCAGAGAAACTGAAGAGGCATATGTTGACTCACAGCGGTTTGAAACCGCATGCCTGCACCTACTGCGAGAAGAGTTATCGTCAGGCCAAGGATCTAAAGCTGCATCTGCAGCAGCACACGGGCGAATGTCCCTTCATTTGTGGCACTTGCGGTGAACGATTCATACAGAGCAGCACGCTGGAGAAGCATCGCATGATGCGACGTCATTTTGACGAAGTGGAAGTAGCTCAAAATTAG
Protein Sequence: MKLRLPGVCRTCDASARGARKLLNLDTPSKEFPDKSLASILSELTNIDLQVPFAEKLPQCLCTSCSKRLVSAFEFVKQAVAANDLLMEHLKKTSSSSDCLLETPMELCADLHLELKMETEDEEDSAGIKDITCTELPELTVKNSVDPLIKLVSIKQEPNVSEEDPEYDTQDSETDDEDSEEYQPREKRVSNRNQTIIKEQKRKFQCAECPKSFKRAAHLKQHLKVHADPKPPASVSEHKKAKAIDLNLCKPHGYKLIECLICQNQFSKIADLRRHLETHPEVVTLAGQEPVELAKLFYPNAKDISEEELRQLIHKDLSSGQYQNFYSITNQHGYEMGLDSSETECESETKEEPQVKYNCELCQQAYARKYQLYDHQNQAHSWLDAPHVCGRCDARFVSQQLLRHHNETLCRNVQKRFHCLKCPLRFRWKQNLRAHVREHRKNIQLHECHHCKSVFRNKKSLTIHLLGVHAEDSTVLPCQWCNRKFFRQDYLVKHLKRHGLREQDIPLAETIIAATSKPNGVKRISCKVCNLQFERIYDLRAHIQQELMISKSSLASSLHQNYDSLRNYSITNESGFELQLGDSETEDEMSVNGMGQAQLVYICELCSLQCRRKYEMIQHQRTVHCFDKMPHECDKCIFKCVSKSIMDYHRQAQCGSLEKKHSCSHCSYKYMWPENLEQHIKLQHGQLTTTTTGEQLSTSENLAGPIKEAASVLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKDAVKMFLCSLCGYKTNTSYQLLTHTRRHTGEKPFKCDLCEAAFPRHSEMISHRRMHTGEKPFHCTVCGKDFARAEKLKRHMLTHSGLKPHACTYCEKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQSSTLEKHRMMRRHFDEVEVAQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00915511;
90% Identity: iTF_00916495;
80% Identity: -