Lmig000934.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- -
- Assembly
- GCA_026315105.1
- Location
- scaffold134624:1931247-2294070[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-15 7.3e-11 42.2 0.1 4 75 22 95 20 125 0.83 2 4 5.2e-06 0.11 12.0 17.1 345 493 129 346 113 365 0.67 3 4 1 2.1e+04 -6.1 6.6 180 210 454 483 349 559 0.44 4 4 0.028 5.9e+02 -0.3 27.5 71 227 607 781 579 828 0.47
Sequence Information
- Coding Sequence
- ATGCTGGACACTTCAATTTACGAAAGTCGAAATTCTTGGAATCCAATGAAGAGATCTCGCGTGGACAGGAACCAGCTGCGCGAGCGGGAGCGGCAGGCTCGCGCCCAGATGTCGCAGCAGCAGAGCGACCGGGAGGCCGACATCAGCGCGCCGCTGTTCGACGCTCCCGTCAAGGTGACGCCGTCGCCGGCGGACACGACGGCGTCGCAGATCCAGCGCAAGCTGGGCAACTACGAGATGATGCAGCGGCTGCTGGTGGACGAGCCCAAGCGGCTCATCGGCATCGACGGCCTGCCGCCGGCGTCGCCCGCGCCGCCTTCCGCCGCCCCCGCACCCGCTGCTTCGCGGCTCGCCCCGCCCCACCAGATGGCAATTTCTCGGGGCCAGACTTTTTCAGTTGAGAAGATGCTGAAGGAGATGATTGCTGAAGGAAGCGTGACTCCTGTGACAGCAATAGCGACTCCAAGGAAGGAGCTGGAGACCAAATTCACCTTCAATCCTCACCTGAATGCGATAACCGACGTGCTTCCAGCGCAGCTGCCGGTTGGGCGAAAAAGCGATCTGACGGCACCATCTCCACCGCCATCCGTGCCATCGGATCTACTGGAAAAGGACCTGACGCTGTCCGATGACAGCGATGCGGCGGATCCGCTGTTACCACCTGGTGCAGATCTTCTTCTCGCCAGGGACATTCCGGCCCTTCCAGGCATCACTCACCCGTGTGGTGTGCCTCTGTCAATGCTGAGCCCACAGACGACACCACTGCTGCATTTGCAACCACCCCAGGCAACACCTGTGCCTGCACCAGTGCCACCCATGTCGCCAGTAGTGGATGTGGAGCCGGAGATGAGCACTGTGCCTGTGCTGCCATTGACTTCACCACCACCACCTCTGGCTCCATCCATAATCACTACCAATGGTGGCCACCCTGATGCATCTCCGTCATCTAGTGACGTTGATTCAGATTCATCTGCAAGCTCCAGCAGTTCCAATAGTGGTGAAGATGATGACGACGATGATGATGAACAGCCTAGTGCCGTGGAAGATATGGTGGTGCCACAACCAGAGCAGAGCCCAGGACATCCACCGTCCAGTACTTTGGTCCCGGCAGCTACTACTACTGTGCTCTCTGATACCGTTGCAGCTGTGGCTCCTAATGAGGAGACAAATAACAACCGCAGCTGGGGTCTGGCAAATTTCTTACATGCTCAGCAAGATAGGTCATTACAGGAGTGCATGAGTCGCTGCAGTCCGGGTTCAAGGTTGGAACTGCCATCTGCCCCTGCTGCTCCAAGAGCTCCATCTCATGTACCTGACTCAGATGATGATGACAACGATGAAGATAATGAAGATGATGACGATGACGAGGAAGAGGATGAGGAGGAAGAGGAGCNNNNNNNNNNNNNNNNNNNNNGCCGCCACAGCAGCAGCGTCGGCAAGAGGATCCGGAGGAAGAGGACGAAGAGGGCTAAGCGTAGGATAAAGCACGAGGATCCACCTGTAAATGTTGCCGACAGGGACGCACCTCCGGAGAAAAGCCGCAAGAAAACTGTGAGGGACAGTAGTTACGGCAAGCGCAACAAAACCTCACCGGAGCCGGGAAAATCTCCTGCAACTGCCCCCGTTGCCCCAGTCAAGTGTGAACCAGTGGAATCGCAGGCACCACCTCGTCTTCTGTGCAGCATCAGCCTGTCACGGCTCACTTACATACCGCCAAAGCCAGGTGTTAAGCTCGAGCCTCGCAATAGCCCAGCATCTTCCCCTGTTAAGGAGCAACAGTGTGATGTGGAAGACGAGTCAAAACAGCAGATTCGTGCCCGTCTCTTTGGTGACCCAGTGTCAAATAATTCCGAGCCACCGTGTAGCAAAAAACGGACTCGTTCGCCGAGCTGTGATTCCCCTGAGGAGGGGGAGATTGTGATGCCAAAGTGTGAAAACGTGGACGCTAATAAAAGTGCCACAAGTGCAACTACTACTCCAGTTAGTAGCCGTGATGTAGAAGTGTCAGAAAAACCACAGAAAAAGCCTAAGAAGCACAGAAGCCAAAGTAGGGAAGACAGCCACAAGCACTCAAATGGCAGAGGTGCTGTAAATGTAGGAGAGAAACAGGAGACTGAGGTGAAAGGACATCACCGATCAAAGTCGAAGCAACGAGATAAAGACCGTGAGCGTGGCAGTGGTGGGAAATCCCATCGACATAACCGCGCACACGGTCATCACAGGCGTGAACGACGTGTGAGTGCGAGCAGCTCTGCTTCGTCTCAGAATCTGCCAGAAGCCCCTATCCCTGCTTCCATTTCTCAGCCGGAGCAAGCACCTGAACAGCACCAGTCTTCTCCAGCTCAGCCCATAGCTTCCACATCGAGTGGTGTGACAGGAACAACGAATGTGTGCCGTCTCCCCTCTGACAGCGACAGTGAAGATGAGCCACACCGGCCCTCTAGTCAGGTCGACATGGTATTGTCAGACATGCAGCCTACAAACCACGAGAGGGAAGTAGCGGGAATCCTGGGGAGACACTCTCCAGGACCTAACTCAGACTCTCACCTCGGGTGGCCTCCCCCTGCTACACCTGCCCAGAGGGTATACTACTCTTACTTTGAGCGTGACGATGAAGGCTCGAGTGATGAGGGCCGTGACCAGAACCGGTTCCTGACGGAAGCTAAACGACTGAAGCATGGAGCAGATCGTGAAACTGACCATACTGCGCAAGGAATGCAATATCTTGAAGCTGTGCTATTTTTCTTGCTGACTGGCAATGCCATGGAGCATGATAGCTGTACTGAGAAAGCTGCTTTCACTATGTACAAGGATACACTCAGTCTTATTAAATACATTTCATCAAAGTTCCGAGGAACTCAAAGTGCTACACCCCAAGGCAGCATTCACAGCAAGCTTGCTATATTGAGTCTGAGGTGCCAGTCCCTGCTGTATTTCAAACTCTTCCAAATAAAGAAGTATGAAGTGAAGGAGTTCCAGAAAGTGATCGCCGAATACCAGCAGAGGGCCCCAACTCTTCAACAGGAGCAAGTTGTAGGTGGTCAGGGAACTCCCTCTCCGCTGTCACCAACACCATCACCAGCTGGCTCGGTGGGCTCAGTCAGCTCTGTGGGGTCACTGGGCTCATCTGGTTACAGCAGTGATGCTCGAGGAGTAGGTCCCACGCAACCTGTGATTCAGCCGCAGCATTCTGCTCCTCCTCCTTGTGTTGCAGTTCCTTTGACAGTGCATAGTGCTATGCAACGTCAGAATCAGTTCTTCACGTATCTGACATCCTGCTTTGATCTGTGGGAACAGGCTGACGGGCTTGTTTACAAGGGCAAGCACAGAGAATTCTTCATTGAGCTGGACCGGTACTGTGGACCGTTAACATTACACAGCTCTCTGAATGACCTGGTTCGATATGTGAGGATCGGCATCCAGAGGCTCAAAGAGATCTCATCTTCACAGCCGACATGA
- Protein Sequence
- MVVNFKVFKKCSPNGKLTLYLGKRDFVDHITGTEPIDGVILLDQDYIDQRKIFGQVICSFRYGREEDEVMGLNFQKDLYLASEQLYPPPEKREHNLTKLQERLLKKLGPNAFPFNFTLPPNAPASVTLQPGREDEGEPCGVKYFVKVFCGESETDRTHRRSTVTLGIRKVQYAPSKQGRQPCTVVRKDFMLSPGELELEVTLDKQVYHHGEKIGVNICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQSRSAVASAESQEGCPINPGSSLQKVIYLIPTLESNRGRRGIALDGTLKHEDVTLASTTLLASPEQRDAFGIVVSYSVKVKLYLGALGGELVAELPLVLMHPKPEKMKAVHADSQADVETFRQETFDGDMTNAAKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -