Lcra011593.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- F54F2.9
- Assembly
- GCA_947563755.1
- Location
- OX387422.1:133583895-133588367[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-05 0.049 15.3 0.0 2 34 274 309 273 315 0.84 2 2 1.2e-08 4.4e-05 25.0 0.1 3 44 355 400 355 402 0.91
Sequence Information
- Coding Sequence
- ATGAACACATTTTGTTTAATACTCTTTTTGTTCTATTGCATTATATCAACAAATGCCTGGGATTCTGAGCAGCTAGAAGTATTTGATGCTGTGGACGAAGTTAAACAAAACTTCTATGAACTCCTTAACATTTCTAAAGATGCTACGAATTCCGAGATTAAATCAGCATTCAGAACGCTCTCTCTTAAGCTACATCCTGATAAAAATAAAGATGTTGACACTTCTGAACAGTTTCGTAACTTAGTTACTGTTTATGAAGTCCTAAGGAGTTCTGCCAAAAGAAAGTATTATGATGATACCTTAATAAATGGACTTCCTAGCTGGAAGTCAGGTATATTCTACTATAGATATGTTCGTAAAATGGGAATGACTGAAGTTTTGGCTATTCTTTTCGTTATTATTACTATTGGACAATATTTAGTCAACTGGGGAGTCTACTTTGAGAAGAAGTTAACAGTGGAAGATCAAAAAATCCGAAAGAAAAAATCAAGAAATAGAGGAAAAACTGAAGATGAACCAGATATTTTTATACCAAAACCATCAGTATTTGATACACTGCCTATCCAGTTACCAAAATTTGTTTGGTTCTTGATAACGTCACTTCCTACAGCATTAAAAATTTTAACCTCTTCAGTTAAAAGCAAAATAGAAGAAGTTAATAGACCTCCTTCACCTGAAAAAGAACCTGAGCCTGTAAGGATAAAAACTGTTCGAAAAAGAAATAAATTTGTCTTGCCAGAAGGACCTAACTTTGAAGTTCAACAAACAGGACCAAAAGTTGAATCTGGTTCTTCAGCACCTCCTCCTCCAATATCAGGAGGCCTTTGGACAGATGATGATTTAACAGAACTAATAAGATTAGTAAAAAAATTTCCACAAGGAACCACTGAGAGATGGGAAAAAATAGCCGAACCTCTTAATAGATCTGTACCAGAAGTCACGTACATGGCAAACAAGATGAAAGAAAATGGGTACAGATTACCATCTGAACAAGAAGAAGAGATACAAGTTAAAGTAAAGCAGAAAACCAAGAAAGATGTTGACACAAGTGATACTGTGATAAATTGGAGTCAAACACAGCAAAAAGCATTAGAAGATGCTCTCTTGAAGTTTCCTAAAGGAGCTACTGATAGATGGGATAGGATATCGGAACATGTTCCTGAAAAAAACAAAGAAGAATGTATGTTGAGGTTTAGGTATCTAGCCGAGGATCTGAAGAAACGAAAAGAAACTTCCGATAAGACTGAAGAAACAGAGCCAAATAAATGCGAGAGAAAACTTTATATTTTTGTTTATATATTTATTTGA
- Protein Sequence
- MNTFCLILFLFYCIISTNAWDSEQLEVFDAVDEVKQNFYELLNISKDATNSEIKSAFRTLSLKLHPDKNKDVDTSEQFRNLVTVYEVLRSSAKRKYYDDTLINGLPSWKSGIFYYRYVRKMGMTEVLAILFVIITIGQYLVNWGVYFEKKLTVEDQKIRKKKSRNRGKTEDEPDIFIPKPSVFDTLPIQLPKFVWFLITSLPTALKILTSSVKSKIEEVNRPPSPEKEPEPVRIKTVRKRNKFVLPEGPNFEVQQTGPKVESGSSAPPPPISGGLWTDDDLTELIRLVKKFPQGTTERWEKIAEPLNRSVPEVTYMANKMKENGYRLPSEQEEEIQVKVKQKTKKDVDTSDTVINWSQTQQKALEDALLKFPKGATDRWDRISEHVPEKNKEECMLRFRYLAEDLKKRKETSDKTEETEPNKCERKLYIFVYIFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00458856;
- 90% Identity
- iTF_00735490;
- 80% Identity
- -