Dcar015641.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- F54F2.9
- Assembly
- GCA_029229535.1
- Location
- CM055259.1:17502051-17509995[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-05 0.033 14.8 0.0 2 33 273 307 272 313 0.83 2 2 2.9e-08 3.7e-05 24.2 0.1 3 44 354 399 353 401 0.89
Sequence Information
- Coding Sequence
- AtgaacataatttatttatcttctCTTCTGTTTTATTCGATTACTTCAACAAATGCTTGGGACTCCGAGCAATTAGAAGTATTTGATGCTGTAGACGATgtcaaacaaaacttttatgaaCTTCTTAATATTTCTAAAgATGCTACCAGTTCTGAAATTAAATCAGCATTCAGAACGCTCTCTCTTAAGCTACATCcagacaaaaataaagaagttgATACCTCTGAACAATTCCGTAATTTAGTTACAGTCTATGAAGTCTTAAAAAGCCCTGCCAAAAGAAAGTATTATGATGATACCCTCATCAATGGACTTCCTAACTGGAGGTCGGGTATATTCTACTACAGATATGTTCGTAAAATGGGAATAACTGAAGTTTTAGTAattctttttgttattattactattgGACAATACTTGGTTAACTGGGGAGTCTACTTTGAGAAAATTCTGACTCTGGAAGATCAAAAACTTCGAAAGAAAAAATCACGAAACAGAGGGAAAGTTGAGGAAGATCCAGATATTATTATACCAAAACCATCAGTATTAGATACACTTCCTATCCAAATACCAAAATTTGTCTGGTTCTTAATAACATGCATCCCTGCTGCATTTAGATTTTTAACATCTTCAGTCAAAAATAAGATAGAAGTTAACAGACCTCTGACACCAGAACTAGAACCTGAACCTGTAAGGATTAAAACCACCAGAAAAAGGAATAAATTTATACTTCCAGAAGGGCCTAACTTTGAACTTCAAGATACAGAGCCAAAAAGTGACTGTGGTACTTCAGCTCCTCCTCCTCCTGTTTCAGGAGGCCTTTGGACTGATGATGATTTAACAGAATTAATaagattagtaaaaaaatttcctcaaGGAACAACTGAAAGATGGGAAAAAATTGCTGCATTTCTCTATAGATCTGTACCGGAAGTCACATATATGGCAAATAAGATGAAAGAAAATGGCTATAGATTACCATGTGAACAGGATGATGAAATACAAgttaaagtaaaacaaaaatcaaagaaaGAGGTTGGTCCCTATGATAGTGTAACAAATTGGGGACAGGCACAGCAAAAGGCATTGGAAGATGCTCTTTTGAAGTTTCCCAAGGGAGTTTGTGATAGATGGGATAGGATAGCTGAACACGTTCCTGACAAAAATAAAGAAGAATGTATGCAGAGGTTTAGGTACCTAGCGGAGGATCTGAAGAAACGAAAAGATACCTCTGATAAGactgaataa
- Protein Sequence
- MNIIYLSSLLFYSITSTNAWDSEQLEVFDAVDDVKQNFYELLNISKDATSSEIKSAFRTLSLKLHPDKNKEVDTSEQFRNLVTVYEVLKSPAKRKYYDDTLINGLPNWRSGIFYYRYVRKMGITEVLVILFVIITIGQYLVNWGVYFEKILTLEDQKLRKKKSRNRGKVEEDPDIIIPKPSVLDTLPIQIPKFVWFLITCIPAAFRFLTSSVKNKIEVNRPLTPELEPEPVRIKTTRKRNKFILPEGPNFELQDTEPKSDCGTSAPPPPVSGGLWTDDDLTELIRLVKKFPQGTTERWEKIAAFLYRSVPEVTYMANKMKENGYRLPCEQDDEIQVKVKQKSKKEVGPYDSVTNWGQAQQKALEDALLKFPKGVCDRWDRIAEHVPDKNKEECMQRFRYLAEDLKKRKDTSDKTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911915; iTF_00735490; iTF_00910654; iTF_01105848;
- 90% Identity
- -
- 80% Identity
- -