Lcra021408.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- ATF6
- Assembly
- GCA_947563755.1
- Location
- OX387426.1:165183-169237[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-17 4.5e-13 50.5 10.3 3 55 269 321 267 325 0.96
Sequence Information
- Coding Sequence
- ATGTTAGCAACGGACGATTTTATGCTAGAAGACTATGCATTTAAAAGTTCTCCAGAATCATGTAGTGATCATTCATACTCTACAGAGTGTATGGATTTCACTTCTGATGAGGACTTTCTTACGCAGCTATCAGCAGATTTAGACATACCTCTTTTGTTGAATCAAGGGGAAGATGAACTTAGCATGCTAAATTCATTACTTTATGATAAGAGCCCAGAGGAGATTTTATCTGAAACTGCATCTCCTCCTTATATACCAGAAGATGATATATCCGATGAAATTTCAGAGTTGCAAAATATGGATTTTTCGAAATGTGGACCAGATTCTTTTCCAAATCTCCATTCAGAAATTAAAAATGAACCTGGCAGTCCTGCTTCTAGTAAATCAATTTCCCCAGTATCACCAGAAACCATCATCGATGAAATCATAGTAAAGACACCACCCCCATCTCCTCTTATCATTAATACCGTAAATGAAATGCCAAATAATGTTATATTTGCCCAACCTGTTAAATTATTGACACAAAATTTACCTCAAAAACATATACCAATCATACCAAAAACACCATATGCTCTTCCCATTCAAAAAAAGAATGTAGTGGTTATAAATAGAGACACAAAACCAGTGGTAACAAAACCTCACAATGTAGTATTAGTTGAAAATTTAGGTGTACCCAAAATATCTGTGCCTAATGTACCAGTGACTACTGTCACTAACCTCACTAAAACAGTGACAGTGCCTTCAGTAGTTATAGATAGAAGTTCAAATTTTACGTTGGCCGGGAGGAGTATAGATCCGAAAATTTTGAAAAGGCAACAAAGGAAGATAAAAAATAGGGAATCTGCCAGTTTATCTAGGAAGAAAAAGAAGGATTATGTTACTTCGTTAGAAGAGCAAGTCAAAGAATTGATTGTCGAAAATAAGAGACTGCAAGCAGAAAACGAACAACTGAAAGAGAAAATTTTCCGTTTCAAACCGAACTCTATCATCAACCCCGGAAACAAGGCAATTAAACCTAGTATATTTTTATGCGTATGTTTATTGGTAGTCGGAGTAAATTTAAATATAGTAAGAAATCCGTTTAATACAAAATCGCAAGTGGGATTATTAAAATCGAGTATACCTCAATTGAGCGATCACCGCGGTAGAAGTTTATTATGGGCTACAGAAGATGGTGATTCGATCGAAAATAAAACTTCGTCTTTTTCTCCGTTTTTTATGTGTCCAGCTGCCATTAACCAAACGGAAAGTGCTAGGCTGGTACTAGAACTCGAAAGTTCCGTAACTTCTTATAGGAGGTATAAGAATGATAAACCCGATTATGATACAACTAAAAACGAAATCCAAGTATTTTCTATAAGACCGGACCAAATGTATTCAGAGTTTTTCGAAGCGATCAACAGACAAGATGATACGTTTTACGTTGTGTCTTTTACAGACCAACATATGCTGTTACCAGCTTTGCACCATAACAAAACTAGAAGACCGAAAATGTCTCTTATTATGCCATCAATGTTGCCGAACGAAACCGTGTCCAAAACGTCGCTAATCTCGTTGATGCAAATCGATTGCGAAGTCCTCGATACCAGATTAATACAAGTTAAACACGGAGCTATTCCTCAACATTTTCGAATGTACGATAACGTTACGAAAAAAGAACCGACAACAGAAACGGAACCGGTCGTTAGCGACGCTAATGCTACGAAAAAGAATTACTACGAAAACAACTACAAACCGTACTTTGTGAAACCACACGAAGGGTCCAAACAATATCCATTATCCATAACTCTGTCGAAAAGTCTGTGA
- Protein Sequence
- MLATDDFMLEDYAFKSSPESCSDHSYSTECMDFTSDEDFLTQLSADLDIPLLLNQGEDELSMLNSLLYDKSPEEILSETASPPYIPEDDISDEISELQNMDFSKCGPDSFPNLHSEIKNEPGSPASSKSISPVSPETIIDEIIVKTPPPSPLIINTVNEMPNNVIFAQPVKLLTQNLPQKHIPIIPKTPYALPIQKKNVVVINRDTKPVVTKPHNVVLVENLGVPKISVPNVPVTTVTNLTKTVTVPSVVIDRSSNFTLAGRSIDPKILKRQQRKIKNRESASLSRKKKKDYVTSLEEQVKELIVENKRLQAENEQLKEKIFRFKPNSIINPGNKAIKPSIFLCVCLLVVGVNLNIVRNPFNTKSQVGLLKSSIPQLSDHRGRSLLWATEDGDSIENKTSSFSPFFMCPAAINQTESARLVLELESSVTSYRRYKNDKPDYDTTKNEIQVFSIRPDQMYSEFFEAINRQDDTFYVVSFTDQHMLLPALHHNKTRRPKMSLIMPSMLPNETVSKTSLISLMQIDCEVLDTRLIQVKHGAIPQHFRMYDNVTKKEPTTETEPVVSDANATKKNYYENNYKPYFVKPHEGSKQYPLSITLSKSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735224; iTF_01105308; iTF_00458608; iTF_00910259;
- 90% Identity
- -
- 80% Identity
- -