Gnym037559.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- ATF6
- Assembly
- GCA_963978555.1
- Location
- OZ021719.1:15752567-15755903[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-18 7.4e-15 55.9 8.3 3 55 267 319 265 324 0.95
Sequence Information
- Coding Sequence
- atgttagcAACAGACGATTTTATGATTGAAGACTATGCATTTAAAAGCTCTCCAGAATCATGTAGTGATCATTCATACTCTACAGaaTGTATGGATTTCACTTCTGATGAGGACTTTCTTACGCAGCTATCAGCAGATTTAGACATACCTCTTTTGTTGAATCAAGGGGAAGATGAACTTAGCATGCTAAATTCATTACTTTATGATAAGAGCCCAGAGGAGATTTTATCTGAAACTGCCTCTCCTCCTTATGTACCAGAAGAAGATATATCCAATGAAATTTCtgagctgcaaaatatggaTTTTACAAAATGTGGACCAGAGTCTTTTCCAAATCTCCATtcagaaattaaaaatgaaccTGGCAGTCCTGCTTCTAGTAAATCAATATCCCCAGTATCTCCAGAAATTGATGAAATCATAGTAAAAACACCACCTGCATCTCCTCTTATAATTAATACTGTAAATGAAATGCCAAATAATGTTATATTTGCCCAACCTGTTAAATTATTGACACAAAATTTACCCCAAAAACATATACCAATCATACCAAAAACACCATATGCTCTTCCTGTCCAAAAAAAGAACGTAGTAGTTATAAATAGAGACACAAAACCAGTTGTTACAAAACCTCACAATGTAGTATTAGTTGAAAATTTAGGTATCCCCAAAATATCTGTACCTAACGTGCCAGTGACTACTGTCACCAACCTCACTAAATCTGTGACAGTGCCTTCGGTAGTTATAgataaaagttcaaattttacCTTGGCCGGGAGGTGCATAGACCCAAAAATTTTGAAGAGGCAACAAAGGAAGATAAAAAATAGAGAATCAGCTAGTTTATCTAGGAAGAAAAAGAAGGATTATGTTACTTCATTAGAAGAACAAGTTAAAGAATTGATTGCTGAAAATAAGAGATTGCAAGCAgaAAATGAACAATTGAAAGAgaaaattttccatttcaaaCCAAACTCTATCATCAACCCTGGAAATAAGGCAATTAAACCTAGTATATTTTTATGCATATGTTTATTGGTAGTCGGAGTAAATTTAAATATAGTAAGAAATCCGTTCGATTCAAAATCACAAGTTGGATTATTAAAATCGAGTGTTCCTCAATTAAGTGATCACCATGGTAGAAGTTTATTATGGGCTACGGAAGAAGGTGActcaatggaaaataaaacttcaactttttctccgttttttaTGTGTCCAGCTGCCATTAACCAAACGGAAAGTGCTAGGCTGGTACTAGAACTAGAAAGGTGGATTGGCAAACCCGTAGATTTGCCggtaaaaattaatttggatTCGAATGCCGCAGTTCcggtaaaaacaaaaaaagtccATCCGAAAAGGAAAAAGTACAGATTGGATAGTTCCGTAACTTCTTATAGAAGATATAAGAATGATAAAACTGATTATGATACAACTAAAAATGAAATCCAAGTGTTTTCTATAAGACCAGACCAAATGTATTCAGAGTTTTTCGAAGCAATTAACAGACAAGATGATACGTTTTACGTTGTATCTTTTACAGACCAACATATGTTGTTACCAGCTTTGCACCATAACAAAACTAGGAGACCGAAAATGTCTCTTATTATGCCATCAATGTTGCCCAATGAAACTGTGTCCAAAACGTCGTTAATTTCATTGATGCAAATCGATTGTGAAGTCCTCGATACCAGATTAATCCAAGTTAAACACGGTGCTATTCCTCAACATTTTAGAATGTACGACAACGTTACGGAGAAAGAACCGACAACAGAAACAGATCCAATCGTTAATGCCACGAAAGAAAAGTACTACGAAAACAACTACAAACCGTACTTTATGAAACCCCAGGACAGgtttttaaactaa
- Protein Sequence
- MLATDDFMIEDYAFKSSPESCSDHSYSTECMDFTSDEDFLTQLSADLDIPLLLNQGEDELSMLNSLLYDKSPEEILSETASPPYVPEEDISNEISELQNMDFTKCGPESFPNLHSEIKNEPGSPASSKSISPVSPEIDEIIVKTPPASPLIINTVNEMPNNVIFAQPVKLLTQNLPQKHIPIIPKTPYALPVQKKNVVVINRDTKPVVTKPHNVVLVENLGIPKISVPNVPVTTVTNLTKSVTVPSVVIDKSSNFTLAGRCIDPKILKRQQRKIKNRESASLSRKKKKDYVTSLEEQVKELIAENKRLQAENEQLKEKIFHFKPNSIINPGNKAIKPSIFLCICLLVVGVNLNIVRNPFDSKSQVGLLKSSVPQLSDHHGRSLLWATEEGDSMENKTSTFSPFFMCPAAINQTESARLVLELERWIGKPVDLPVKINLDSNAAVPVKTKKVHPKRKKYRLDSSVTSYRRYKNDKTDYDTTKNEIQVFSIRPDQMYSEFFEAINRQDDTFYVVSFTDQHMLLPALHHNKTRRPKMSLIMPSMLPNETVSKTSLISLMQIDCEVLDTRLIQVKHGAIPQHFRMYDNVTEKEPTTETDPIVNATKEKYYENNYKPYFMKPQDRFLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911593;
- 90% Identity
- iTF_00910259;
- 80% Identity
- -