Lcap012925.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- XBP1
- Assembly
- GCA_949126875.1
- Location
- OX421398.1:19386765-19391236[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-14 7.1e-11 43.6 14.6 2 64 41 103 41 110 0.95 2 2 8.1 1.8e+04 -2.6 0.4 36 50 164 178 153 187 0.60
Sequence Information
- Coding Sequence
- ATGGCTACAGCTGTGTCGTCAATActtaaatatttagaaaacacCAATCAAAATTTTTCAATGGACTCCAGTAACGACATTCCTAAagcaaagaaaagaaaactggaCCACTTGACATGGGAAGAAAAACTTCAAAGGAAaaaattgaaaaatcgagTTGCGGCACAAACGTCCCGCGACCGAAAAAAGGCCAAAATGGAACATATGGAACAAGCACTGCAACAACTATTCTCTAGGAATGAGTCACTTATAGCTGAATGTGAAAACCTCAAGGTCACAAATCAGAAACTCCAGGAAGAAAACACAGATTTGTACAATCGTCTTCAAAGTCCTTGCTTGACTTGTATACAAGCCCAAAGCCAAAGGAAGAGCCACGCATCCAGCAGCGTCTTTGAGCAAACAACAAGCAATGATATTGATGAAGATCGTACTGAGTTGCCTTCTTTACCGGATCTCCTCGACGAACTTGAAGCAGATGTCGACCTTACCTCATTGGAACAACTCACTCAAAGCCTCTTGCAAGATATCGCCAGAGACTTGGAGGCTACTGCTCAGAAAACCGATAGTGAAACAGCAACAAGCTTTGGAGATCGTTCTGGAGAAATGGTGGGGCAGACACCAACGGAACTGGAACCCAGTGGAGTTACAACAACCGATTCCAAGTCGTTAGAAATCGATATATCAGAATATCTACTGCTCCACCACAACTATGCTGCAAAACCACCGGCAGATAAACCAAAAAGAGTCAAAAATTCCCACACAAAAAGTAATAAGTTGAAATCGATTAAACCTAAGCGTAATAATGTTATTGTGCATCAACCTGATGTTGAATCACAAAAGGAAGTTATATTTGGAACGCTGGATGAGGTTACCAATGTGGTAACAATCATTGTGGACAACGATGGAATACCCATTACAGAAGAAGTGTTACAAAGGTTAGAACCTGAAACAGAGCTAAATTTGGTTGTCCCATCACCAGCAACACAATGTTTGTCACCAATGTCCTGTAGTGATTCAGATAGAGGATACGAATCTTTGGATTCACCGGTTAGTTTACCCGAAGATATTTGGGATCAAAGTATATCAGAACTATTCCCTTCCCTATTTTAG
- Protein Sequence
- MATAVSSILKYLENTNQNFSMDSSNDIPKAKKRKLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMEHMEQALQQLFSRNESLIAECENLKVTNQKLQEENTDLYNRLQSPCLTCIQAQSQRKSHASSSVFEQTTSNDIDEDRTELPSLPDLLDELEADVDLTSLEQLTQSLLQDIARDLEATAQKTDSETATSFGDRSGEMVGQTPTELEPSGVTTTDSKSLEIDISEYLLLHHNYAAKPPADKPKRVKNSHTKSNKLKSIKPKRNNVIVHQPDVESQKEVIFGTLDEVTNVVTIIVDNDGIPITEEVLQRLEPETELNLVVPSPATQCLSPMSCSDSDRGYESLDSPVSLPEDIWDQSISELFPSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735237; iTF_01105322; iTF_01105321;
- 90% Identity
- iTF_00735237;
- 80% Identity
- -