Gnym021848.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- XBP1
- Assembly
- GCA_963978555.1
- Location
- OZ021711.1:11684287-11687782[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-14 1.1e-10 42.5 13.8 2 64 41 103 41 104 0.95 2 3 0.026 43 5.4 0.7 33 55 86 108 85 110 0.82 3 3 7.2 1.2e+04 -2.4 0.5 35 50 163 178 153 187 0.61
Sequence Information
- Coding Sequence
- ATGGCTACTGCTGTGTCGTCAATActtaaatatttagaaaacaccaatcaaaatttttcaatggaCTCCAGTAACGACATTCCTAAAGCAAAGAAAAGAAAACTGGACCACTTGACATGGGAAGAAAAACTTCAAAGGAAaaaattgaaaaatcgagTGGCTGCACAAACGTCCCGAGACCGCAAAAAGGCCAAAATGGAACATATGGAACAAGCACTCCAACAATTATTCTCTAGGAATGAGTCACTTATAGTTGAATGTGAAAACCTCAAGGTCGCCAATCAGAAACTCCAGGAAGAAAACACAGACCTGTACAATCGTCTTCAAAGCCCTTGCTTGAATTGTATACAAGCCCAAAGCCAAAGGAAGAGCCACGCATCCAGCAGCGTCTTTGAGCAAACAACAAGCACTGATATTGATGAAGATCGTACTGAGCTGCCTTCTTTACCAGATCTCCTCGATGAACTTGAAGCAGATGTTGACCTTAACTCATTGGAACAACTTACTCAAAGCCTCTTGCAAGATATCGCCAGAGACTTGGAGGCTACTGCTCAGAAAACCGATAGTGAaacAGCAACAAGCTTTGGAGATCGTTCTGGAGAAATGGTGGGGCAGACACCAACGGAACTGGAACCCAGTGGAGTTACAGCAACCAATACCAAGTCGTTAGAAATCGATATATCAAAATATCTACTGCTCCACCACAACTATGCTGCAAAACCACCAGTAGATAAACCAAGAAGAGTCAAAAACTCccacacaaaaaataaaaagttgaaaTCAATCAAACCTAAATCAAATAATGCTATTGTGTCACAACCCGATGTTGAATCACAAAATGAAGTTATATTTGGAACGCTGGATGAAGTTACCAATGTGGTGACAATAATTGTGGACAACGACGGAATACCCATTACAGAAGGAGTGTTACAAAGGTTGGAACCCGAAGCAGAGCTAAATGTGGTTGTTCCATCGCCAGCAACGCAATGTTTGTCACCGATGTCCTGTAGTGATTCGGATAGAGGATATGAATCTTTGGATTCGCCAGTTAGTTTACCTGAAGATATTTGGGATCAAAGTATATCAGAACTATTCCCTTCTCTATTTTAG
- Protein Sequence
- MATAVSSILKYLENTNQNFSMDSSNDIPKAKKRKLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMEHMEQALQQLFSRNESLIVECENLKVANQKLQEENTDLYNRLQSPCLNCIQAQSQRKSHASSSVFEQTTSTDIDEDRTELPSLPDLLDELEADVDLNSLEQLTQSLLQDIARDLEATAQKTDSETATSFGDRSGEMVGQTPTELEPSGVTATNTKSLEIDISKYLLLHHNYAAKPPVDKPRRVKNSHTKNKKLKSIKPKSNNAIVSQPDVESQNEVIFGTLDEVTNVVTIIVDNDGIPITEGVLQRLEPEAELNVVVPSPATQCLSPMSCSDSDRGYESLDSPVSLPEDIWDQSISELFPSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910270;
- 90% Identity
- iTF_00910270;
- 80% Identity
- -