Basic Information

Insect: Lithosia quadra
Gene Symbol: stc
Assembly: GCA_963576445.1
Location: OY754884.1:13466580-13479124[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.5e+04 -4.4 1.6 15 19 576 580 575 580 0.81

2 13 0.053 6.7e+02 0.9 1.4 2 10 608 616 608 616 0.92

3 13 4e-05 0.51 10.9 18.1 4 19 624 639 622 639 0.93

4 13 1.2e-06 0.015 15.8 11.0 3 19 677 693 675 693 0.91

5 13 2.2e-05 0.28 11.7 13.4 1 18 734 751 734 752 0.98

6 13 1e-05 0.13 12.8 12.1 1 19 793 815 793 815 0.88

7 13 2 2.5e+04 -5.4 2.2 6 10 845 849 845 849 0.94

8 13 0.0036 45 4.7 7.4 1 11 855 865 855 866 0.95

9 13 0.046 5.8e+02 1.1 0.3 4 10 870 876 869 877 0.93

10 13 6.5e-06 0.083 13.4 15.0 3 19 884 900 882 900 0.92

11 13 0.00042 5.3 7.6 9.6 10 18 947 955 944 956 0.92

12 13 4.1e-08 0.00053 20.4 14.0 1 17 992 1010 992 1016 0.83

13 13 0.00068 8.7 7.0 4.7 1 13 1022 1033 1022 1037 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.5e+04	-4.4	1.6	15	19	576	580	575	580	0.81
2	13	0.053	6.7e+02	0.9	1.4	2	10	608	616	608	616	0.92
3	13	4e-05	0.51	10.9	18.1	4	19	624	639	622	639	0.93
4	13	1.2e-06	0.015	15.8	11.0	3	19	677	693	675	693	0.91
5	13	2.2e-05	0.28	11.7	13.4	1	18	734	751	734	752	0.98
6	13	1e-05	0.13	12.8	12.1	1	19	793	815	793	815	0.88
7	13	2	2.5e+04	-5.4	2.2	6	10	845	849	845	849	0.94
8	13	0.0036	45	4.7	7.4	1	11	855	865	855	866	0.95
9	13	0.046	5.8e+02	1.1	0.3	4	10	870	876	869	877	0.93
10	13	6.5e-06	0.083	13.4	15.0	3	19	884	900	882	900	0.92
11	13	0.00042	5.3	7.6	9.6	10	18	947	955	944	956	0.92
12	13	4.1e-08	0.00053	20.4	14.0	1	17	992	1010	992	1016	0.83
13	13	0.00068	8.7	7.0	4.7	1	13	1022	1033	1022	1037	0.95

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATACGTACACTTATAACAACCAATATCAAACTTGGAACGGTGACCCTAATGTCCAACAACAATATGTTAACCAAGCATATTATGCCAACAGAGCAGATCCATCCAATCAGTATGTCAGCTTTAATGAATTTCTATCACAAATGCAAACTACCAGTGGCGGTAACGCTGCAAATGCTGCAAGTGCTTCCAACTACAGTTCTCTTCAATATGAAAACTACCCCAACAGACAATACAATTTTCAAAATGTACCTTCCAACTCCCAGAATCCTCAACTGAACAGTTATAATTATGCAGCCACCTCATCTAATGTACCTAATGGCACTGAGTCATACCAGGTCAACATGCAGAATCAATATAACACAGTACCTGACCAAAACACCTACTCAAAAGATATGATTCTGAAGTCTAATCTCACGCCTACCGCAACTGAATTTGTGCCAAAAGGTTCTATGATGAAGCCTTCTAGCAGCACACAGGATATTCCTAAACAAGAAACCAAGACTTACAATGGAGGTAATGaaaatagacataattataatagtagaaCAAGTGAACCTAGaaaccattataataatataaatgagtCTAGAAGTGCCCTTGGCAGTTCGTCTGACTCTAACTGGAGGGAAAGACCTCAGAGCTCTCAGCTTAATGTTGACTTAACTAAGTCGGAGCCAAATCACATTCCCCAGGACAGAAGCCAAGAAACTAATAACAAGAGTCGTAATCGTTACAATGACTCTAACCGCAGGCAATATGACAAAAGTAAGCAAAGTCATGAGCCAAACGAACAGTATTTTGACTCAAATAACCTTGAAATGAATGCCACATACACTAATCCTTCGGAAGCTGTTAATAGTCAGCCAGATACTGCGAGTAGCCATAACTCAGGTGCTAATCAATATTATGAACCAAGTACAACTCAAGATTCAAGTGATCAGTATTACAACTCCACTAATTATAGCCAAGAAAACAAGAACTATGATAGTAATAGTCGTCACTATGATTCCATTAGCCGCAACCAAGACTCAACAAACCGATACAATGAACCAAATAGCCGAAACCCAGAATCCAACATTCGCTATAATGAATCAAGTCATCGAAATCATGACTCGAATGGTAGATATAATGACTCTAGTTATCGTAACTCAGACTCTAATAGTCGGAATTACGATTCAAACCGATATGATGGTAGTAATAAAAGAGGACAAAACAGGGTAAATTATAAATCCAAGAATAAGGAGCCTGATAACCGAACATATTATAACAGTGCTATAGGGAAAGAAACGCAGGATGTAAGGAGTTCTAGGGGAGAAGGGTCTGGACGTTACAAGAGCTATGCAGGGAGTCAACGGGTGCGAGGCTATGAGCGTAATAATACTGAGGATGAACAGTATGCTAACACGTATTTACAACCCAAGGAAGAGAAAATAGAACGGGAAAGAGAACGAAGAGAAAAGTCTGAATATGTACCCAGTCCACAAAGGCTCAGGAAGCAAAATGTGAACCATGATCCAGctCAAATTGAGATGACCCAACGTGAACGTCTGACAGAACAACTGGACAAAGGCACATTAGAATGTCTTGTGTGCTGTGAACGGGTAAAGCAAACGGAACCAGTATGGTCATGCAGTAACTGTTATCATGTACTGCATTTGCGCTGCATCCGGAAATGGGCTATGAGTAGCATGGTTGAGGGAAAATGGCGTTGCCCAGCCTGCCAAAACACGAATGAGGCCATCCCTACCGAATACCGGTGTATGTGCGGATCTGTCCGCTCTCCGGAATACCAGCGTGGTGCTGCTGGAGCTCACACTTGCGGCAAGGCATGTCGCAGAGCGCGGCTGTGCCCTCACCCGTGTACTTTGCTGTGTCACCCTGGACCTTGCCCTCCATGTCAAGCTACTATTACCAAACAATGCGGCTGCGGTGCGGAGACCCGTTCGATAATGTGCAGCAGTAAGCTGCCACAAGTGTGTGGGCGCGTCTGCAAACGAACTTTGGAATGCGATGTGCACACATGCGCTAAAGACTGCCATGAAGGACCCTGTGATACATGCAGCGAGATCGTTACGcaagTGTGCTACTGCGCGGGCGCGGTGGAGCGGCGGGTGGCGTGCACGCGCGCGTCGGGCGCGGCGGCGCGCTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCCTGCCACGCGCCGCCCTGCCCGCCCTGCGCGCTGCTGCCGCGCCGCGTCGCCGCCTGCCCCTGCGGCAAGACCAAATTGGAGCCAGACTCGCGCAAGTCTTGTACCGACCCGATCCCACTGTGCGGTAACATCTGCGCCAAGCCTCTGGACTGCGGCCCTGCCGGAGACAGGCACTTCTGCAAACTTGACTGTCATGAagGTCCGTGTCCTACGTGCCCCGACAAAACAGTGGTCCAGTGTCGCTGCGGCCACTCAAGCCGCGAAGTACCGTGCGCTGATCTGCCCGAGATGTTCAACAATGTATTCTGTCAGAAGAAATGCAATAAGAAGCTGTCGTGCGGACGTCACCGCTGCCGCACGGTGTGCTGCGCGGCCACGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGGGCTGCCAGACGCACCGCTGCGAGGAGTTCTGTCACACCGGACACTGCGCGCCCTGCCCCCGCGTCAGCTTTGAAGAGTTGACTTGTGAATGTGGAGCTGAAGTCCTCTTGCCACCTGTCCGATGCGGTACCCGCCCTCCGGCCTGCAGCGCCCCTTGCGTGAGGGAACGCCCGTGTAAACATCCTCCGCACCACTCCTGCCACTCTGGGGACTGCCCACCCTGCGTCGTACTTACTACTAAGAGGTGTCATGGTGACCATGAGGAGCGCAAGACAATACCGTGTTCACAAGATGAGTTCTCGTGCGGCCTGCCTTGTGGCAAACCATTGCCATGTGGCAAGCACACGTGCATCAAGACTTGTCATAAAGGGCCGTGCGATACTGGCAAATGCACCCAGCCGTGCACGGAGAAGCGTCCGTCGTGCGGGCACGGGTGCGCGGCGGCGTGCCACGTGGGCGCGGCGACCCCAGCGGCCGCGCAGTGCCCCAGCGCCGCGCCGTGCCGCCGCCTCGTGCGCGCCACGTGCCCGTGTCGCCGTCGTCACGCCGAGCGCTACTGCTCCGACAACGCGCGCGATTACGCACGAATGATGGGTGCTCTAGCGGCCTCGAAAATTCAGGAAGGTGGTTCCGTTGATTTATCGGATGCTCAAAGACCTGGTAACATGCTCAAAACGTTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCAGCTCGTGCACGACAAGCTCACCGAGCTGGTGCAGCTCGCCAAGAAGTCAAAGCAGAAGACACGCGCTCACTCCTTCCCGTCGATGAACTGGCAGAAGCGCCAGTTCATCCACGAGCTGTGCGAACACTTTGGATGCGAGAGCGTGGCCTATGACGCGGAGCCCAACAGGAACGTCGTCGCCACCGCCGACAAAGAAAAGTCTTGGTTGCCGGCGATGAGCGTGCTAGAAGTTCTGGCGCGAGAAGCAGGCAAGCGCCGCGTGCCCGGGCCCGTGCTGCGCGCGCCTGCCGCCGGGACTGCTGGGGCCGCCCAGGGACCACCGCTCAACAAGTCATCCAGTGGCTGGGCAACACTGACTTCGACGAACGCTTGGGCAGCCCGCAGCCAGCCAAAGCTGACCCCTCAACAGCCCCCAGCCGAGAAGATAGACTACTTTGACAACCCGCCCGAGAACTAG
Protein Sequence: MSQWNNTYTYNNQYQTWNGDPNVQQQYVNQAYYANRADPSNQYVSFNEFLSQMQTTSGGNAANAASASNYSSLQYENYPNRQYNFQNVPSNSQNPQLNSYNYAATSSNVPNGTESYQVNMQNQYNTVPDQNTYSKDMILKSNLTPTATEFVPKGSMMKPSSSTQDIPKQETKTYNGGNENRHNYNSRTSEPRNHYNNINESRSALGSSSDSNWRERPQSSQLNVDLTKSEPNHIPQDRSQETNNKSRNRYNDSNRRQYDKSKQSHEPNEQYFDSNNLEMNATYTNPSEAVNSQPDTASSHNSGANQYYEPSTTQDSSDQYYNSTNYSQENKNYDSNSRHYDSISRNQDSTNRYNEPNSRNPESNIRYNESSHRNHDSNGRYNDSSYRNSDSNSRNYDSNRYDGSNKRGQNRVNYKSKNKEPDNRTYYNSAIGKETQDVRSSRGEGSGRYKSYAGSQRVRGYERNNTEDEQYANTYLQPKEEKIERERERREKSEYVPSPQRLRKQNVNHDPAQIEMTQRERLTEQLDKGTLECLVCCERVKQTEPVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGSVRSPEYQRGAAGAHTCGKACRRARLCPHPCTLLCHPGPCPPCQATITKQCGCGAETRSIMCSSKLPQVCGRVCKRTLECDVHTCAKDCHEGPCDTCSEIVTQVCYCAGAVERRVACTRASGAAARWSCGAECARVLACGAHVCRAPCHAPPCPPCALLPRRVAACPCGKTKLEPDSRKSCTDPIPLCGNICAKPLDCGPAGDRHFCKLDCHEGPCPTCPDKTVVQCRCGHSSREVPCADLPEMFNNVFCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLGCQTHRCEEFCHTGHCAPCPRVSFEELTCECGAEVLLPPVRCGTRPPACSAPCVRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHGCAAACHVGAATPAAAQCPSAAPCRRLVRATCPCRRRHAERYCSDNARDYARMMGALAASKIQEGGSVDLSDAQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQLVHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAGTAGAAQGPPLNKSSSGWATLTSTNAWAARSQPKLTPQQPPAEKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638338;
90% Identity: iTF_00405604;
80% Identity: -