Basic Information

Insect: Cybosia mesomella
Gene Symbol: stc_1
Assembly: GCA_946251875.1
Location: CAMIUH010000969.1:343138-359669[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 7.3e+04 -4.4 1.6 15 19 574 578 573 578 0.81

2 13 0.053 1.9e+03 0.9 1.4 2 10 606 614 606 614 0.92

3 13 4e-05 1.4 10.9 18.1 4 19 622 637 620 637 0.93

4 13 3.2e-06 0.11 14.4 8.8 1 19 673 691 673 691 0.91

5 13 3.3e-05 1.2 11.2 15.3 1 19 732 750 732 750 0.98

6 13 1.6e-05 0.57 12.2 12.4 1 19 791 813 791 813 0.87

7 13 2 7.3e+04 -5.4 2.2 6 10 843 847 843 847 0.94

8 13 0.007 2.5e+02 3.7 7.4 1 11 853 863 853 864 0.94

9 13 0.046 1.7e+03 1.1 0.3 4 10 868 874 867 875 0.93

10 13 6.5e-06 0.24 13.4 15.0 3 19 882 898 880 898 0.92

11 13 0.00042 15 7.6 9.6 10 18 945 953 942 954 0.92

12 13 4e-08 0.0015 20.5 14.0 1 17 990 1008 990 1014 0.83

13 13 0.00044 16 7.6 5.0 1 14 1020 1032 1020 1035 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	7.3e+04	-4.4	1.6	15	19	574	578	573	578	0.81
2	13	0.053	1.9e+03	0.9	1.4	2	10	606	614	606	614	0.92
3	13	4e-05	1.4	10.9	18.1	4	19	622	637	620	637	0.93
4	13	3.2e-06	0.11	14.4	8.8	1	19	673	691	673	691	0.91
5	13	3.3e-05	1.2	11.2	15.3	1	19	732	750	732	750	0.98
6	13	1.6e-05	0.57	12.2	12.4	1	19	791	813	791	813	0.87
7	13	2	7.3e+04	-5.4	2.2	6	10	843	847	843	847	0.94
8	13	0.007	2.5e+02	3.7	7.4	1	11	853	863	853	864	0.94
9	13	0.046	1.7e+03	1.1	0.3	4	10	868	874	867	875	0.93
10	13	6.5e-06	0.24	13.4	15.0	3	19	882	898	880	898	0.92
11	13	0.00042	15	7.6	9.6	10	18	945	953	942	954	0.92
12	13	4e-08	0.0015	20.5	14.0	1	17	990	1008	990	1014	0.83
13	13	0.00044	16	7.6	5.0	1	14	1020	1032	1020	1035	0.95

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATTCGTACGCTTATAACAATCAATATCAAAACTGGAATGGCGACCCTAATGTCCAACAACAATATGTTAACCAAGCATATTATGCCAACAGAGCAGATCCATCCAATCAGTATGTCAGCTTCAACGAGTTTCTATCACAAATGCAAACTACTAGTGGCGGTAACTCTGCAAATGCTTCCAACTACAGTTCTCTTCAATATGAAAACTACCCTAACAGACAGTATAATTATCAAAATGCACCTTCCAACTCTCAGAATCCTCAACCAAACAGTTATAATTATGCAGCCACCTCTTCTAATGAACCTAATGTTACTGAGTCATACCAGGTCAATATGCAAAATCAATATAATACAGTACCTGACCAAAGCACTTACTCAAATGACATGATTCTGAAGTCTAATCTAACACCTACAGCTACAGAATTTGTGCCAAAAGGGTCTATGATGAAGCCTTCTAGCAGCACACAGGATATTCCTAAACAAGAAACCAAGATTCACAATGGGGGTAATGAAAATAGAACTAATTATAGTAGAACAAATGAACCTAGAAACCATTACAGTAACATAAATGAGTCTAGAAGTGCCCTTGGCAGCTCATCTGACTCCAACTGGAGGGAAAGACCTCAAAACTCACAATTAAATGTTGACTTAACTAGGTCAGAACCAAATCACATTCCCCAGGAAAGGAGTCAAGAATCTAATAGCAAGATTCGTAACCGTTACAATGACTCTAACCGCAGGCAATATGACAAAAATAAGCACAATCATGAGTCAAATGACCAGTATTCTGACTCAAATAACCTAGGAAGTAATGCGCCATACACTAATCCTCCAGAAGTCAGTAATAGCCAGCCAGATAATGGTAGTAGCCATAACACAGGCTCTAACCAATATTATGAATCAAGTACGAACCAAGATTCAAGTGATCAGTATTATAACTCCACTAATTATAGCCAAGATAACAAGAATTATGGCCTAGATGCTAATAGCCGTCACTATGATTTCATTAGCAGTACCCAAGACTCAACAGGTCGACACGATGAACCAAATAGCCGAAACCCAGAATCCAACATCCGCTATAATGAATCAAGTAATCGTAATCAAGAATCAAATGGTAGATATAGCGACTCTAGTTATCGTAACCTGGATTCAAATAGTCGGAATTATGATACAAACCGATATGACAGTAGTAACAAAAGAGGACAAAACAGGGTAAATTATAAATCCAAGAATAAAGAGCCTGATAACCGAACATTTTATAACAGTGCAATAGGTAAAGAAACCCAGGATGTGAGGAGTTCTAGGGGAGAAGGGTCTGGGAGTTACAAGAGCTATGCAGGGAGTCAACGGGTGCGAGCTTATGACCGAAATAATACTGAGGATGAGCAGTATGCTAACATGTATTTACAACCTAAGGAAGAGAAAATAGAAAGGGAACGAGAACGAAGAGAAAAGCCTGAACACGTATCTAGTCCACAAAGGTTTAAAAAGCAATATGTTAACCATGATCAAGTTCAAATTGAGATGACCCAACGTGAACGACTGACAGAACAACTGGACAAAGGCACATTAGAATGTCTAGTATGTTGTGAACGTGTAAAGCAAACAGAGCCAGTATGGTCTTGTAGTAACTGCTACCATGTACTGCATTTACGCTGCATCCGGAAGTGGGCCATGAGTAGTATGGTTGAGGGTAAATGGCGTTGCCCAGCCTGCCAAAACACGAACGAAGTCATCCCTACCGAATACCGATGTATGTGCGGATCTGTCCGCTCTCCGGAATACCAACGTGGTACAGCTGGTGCTCACACTTGTGGCAAGGCATGCCGCAGGGCGCGGGTATGCCCACATCCCTGTACGTTGCTATGTCACCCTGGACCTTGCCCTCCGTGTCAAGCTACTGTTACTAAACAATGCGGCTGTGGTGCAGAAACCCGTTCGATAATGTGTAGCAGCAAGCTGCCGCAAGTGTGTGGGCGTGTCTGTAAACGCACTTTGGAATGCAATGTGCACACATGCAGTAAAGACTGCCATGAAGGAGCCTGTGATATTTGCAGCGAGACTGTTACACAAGTGTGTTACTGCGCGGGCGCCGTCCCCCGCACGGTGCCGTGCACGCGCGAGTCGGGCGCGGTGGAGCGCTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGAGCCGCCCTGCCAGCCCTGCCAGCTGCTGCCGCGCCACGTCACCGCCTGCCCCTGCGGGAAGACCAAATTGGAGCCAGACTCGCGCAAGTCGTGTACCGACCCGATCCCGCTGTGCGGTAACATCTGCGCCAAACCGCTGGACTGTGGTCCGGCCGGAGACAAGCACTTCTGCAAACTTGACTGTCATGAAGGTCCCTGTCCAACGTGTCCCGATAAGACAGTCGTCCAATGTCGCTGCGGTCACTCAAGCCGCGAAGTGCCCTGCGCTGATCTGCCCGAGATGTATAACAATGTATTTTGTCAGAAGAAATGCAATAAGAAGCTGTCGTGCGGCCGCCACCGCTGCCGCACAATATGCTGCGCGGCCACGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGACGCACCGCTGCGAAGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGCTTCGAAGAGTTGACTTGCGAATGTGGAGCTGAAGTTCTCCTACCGCCTGTCCGATGCGGTACCCGCCCCCCGGCATGCAGCGCCCCTTGCGTGAGGGAACGCCCGTGTAAACACCCTCCGCACCACTCTTGCCACTCTGGGGACTGTCCTCCGTGCGTCGTACTTACTACGAAGAGGTGCCATGGTGACCATGAGGAGCGTAAGACGATACCTTGTTCACAAGATGAATTCTCGTGCGGCCTGCCTTGTGGCAAACCACTACCATGCGGCAAGCATACCTGCATCAAGACTTGTCATAAAGGACCTTGTGACACTGGCAAATGCACCCAGCCGTGCACGGAGAAGCGACCGTCGTGCGGCCACCCGTGCGCGGCGGCGTGCCACGTGGGCGCGGGCAGCCCCGCGGCCGCGCAGTGCCCCAGCGCCGCGCCGTGCCGCCGCCTCGTGCGCGCCACGTGCCCGTGTCGCCGCCGCCACGCCGAGCGCTACTGCTGCGACAACGCGCGCGACTACGCACGAATGATGGGTGCTCTAGCCGCCACGAAAATTCAGGAAGGTGGTTCGGTTGATTTATCAGATGCTCAACGACCGGGTAATATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGTACGCGGCAACTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCTTCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCAGCTCGTGCACGAGAAGCTCACCGAGCTGGTGCAGCTCGCCAAGAAGTCAAAACAGAAGACACGCGCGCACTCCTTCCCATCGATGAACTGGCAAAAGCGCCAGTTCATCCACGAGCTGTGCGAACACTTCGGGTGCGAGAGCGTGGCCTACGACGCCGAGCCGAACAGGAACGTCGTTGCCACCGCTGATAAAGAAAAGTCGTGGCTGCCGGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCCGGGCCCGTGCTGCGCGCGCCCGCTGCTGGCGCCGCCGCGGCCGCCCAGGGACCGCCGCTCAACAAATCATCTAGTGGCTGGGCCACACTTACATCAACGAACGCGTGGGCAGCCCGCAGCCAGCCAAAGCTGACTCCCCAACCGCCTCCAGCGGAGAAGATTGACTACTTCGACAACCCGCCCGAAAACTAG
Protein Sequence: MSQWNNSYAYNNQYQNWNGDPNVQQQYVNQAYYANRADPSNQYVSFNEFLSQMQTTSGGNSANASNYSSLQYENYPNRQYNYQNAPSNSQNPQPNSYNYAATSSNEPNVTESYQVNMQNQYNTVPDQSTYSNDMILKSNLTPTATEFVPKGSMMKPSSSTQDIPKQETKIHNGGNENRTNYSRTNEPRNHYSNINESRSALGSSSDSNWRERPQNSQLNVDLTRSEPNHIPQERSQESNSKIRNRYNDSNRRQYDKNKHNHESNDQYSDSNNLGSNAPYTNPPEVSNSQPDNGSSHNTGSNQYYESSTNQDSSDQYYNSTNYSQDNKNYGLDANSRHYDFISSTQDSTGRHDEPNSRNPESNIRYNESSNRNQESNGRYSDSSYRNLDSNSRNYDTNRYDSSNKRGQNRVNYKSKNKEPDNRTFYNSAIGKETQDVRSSRGEGSGSYKSYAGSQRVRAYDRNNTEDEQYANMYLQPKEEKIERERERREKPEHVSSPQRFKKQYVNHDQVQIEMTQRERLTEQLDKGTLECLVCCERVKQTEPVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEVIPTEYRCMCGSVRSPEYQRGTAGAHTCGKACRRARVCPHPCTLLCHPGPCPPCQATVTKQCGCGAETRSIMCSSKLPQVCGRVCKRTLECNVHTCSKDCHEGACDICSETVTQVCYCAGAVPRTVPCTRESGAVERWSCGAECARVLACGAHVCRAPCHEPPCQPCQLLPRHVTACPCGKTKLEPDSRKSCTDPIPLCGNICAKPLDCGPAGDKHFCKLDCHEGPCPTCPDKTVVQCRCGHSSREVPCADLPEMYNNVFCQKKCNKKLSCGRHRCRTICCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELTCECGAEVLLPPVRCGTRPPACSAPCVRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAACHVGAGSPAAAQCPSAAPCRRLVRATCPCRRRHAERYCCDNARDYARMMGALAATKIQEGGSVDLSDAQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSSKLAPRYSEHVRATAAREPAFAQLVHEKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAGAAAAAQGPPLNKSSSGWATLTSTNAWAARSQPKLTPQPPPAEKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638338;
90% Identity: iTF_00909441; iTF_00638338; iTF_00637122;
80% Identity: -