Lqua017615.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- ttk
- Assembly
- GCA_963576445.1
- Location
- OY754894.1:2247493-2254034[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-24 7.1e-22 78.2 0.0 3 102 26 122 24 128 0.91
Sequence Information
- Coding Sequence
- atgGATGAGGACGATGTTCAACAGTTCTCTTTGCGGTGGCACAACCATCAGAACAGCGTTATAGGTGCTTTAGGGCGCATGTTCAGTACAGGGACCCTGACGGATGTCACCCTCAGCGCCAGCGGCACCACGGTGAAGGCACACAGGCTGGTGTTGGCGTCATGTAGCCAGTACTTCGCTCAATTATTCAAGGAAGTGGAGGCTGAGAACAATACCCTGGTCGTTGTCTTGGGCTGTGATGCAGCAGAGCTAAGGCTACTCCTCACGTTCATGTACACGGGAGAGGTGACTGCCTCTAAGAAGGTCCTGCCATCGTTGCTGCGGCTCGCGCAGACTTTAAAAGTGTCTGGACTCACCGACGCTGATACGAACTCTACTTTGACACCCACCGAATCGGAACTCCCGCAAGACGAAACAGCCTCACCCGTGAATCTCGAAATCAAAAACGAAATCCAACCACCTCAATTAGTCAACGATAACTCCAGTTCTAGTTCCAAATTGAACTATGACGATATGCTGTCGCCAACAAATGAGAAAGAAGCTAATTTTATAAGTGATTACATGATGAAAAGTGAGAAGGACAGACTGAGTAAACTGGATCAGATCGTTCAGAATTTATATAGCACTCACAAAATTGGTAATCCGGCCGCAACCATGGTTACTAGTGTTCCAGAATCGCCTGAGCCTTATGATAGAAAATGGCGAATCAATAGTTCGGTATGTACGATATGCAACAAACGATTGAGCAACCAGTACAACCTGAGGGTTCATATGGAGACGCACGCGGGGAGGAGGCACGCCTGCAGGGCTTGTTCGCACGTGTCAAGGTCTAGAGATGCCCTTAGGAAGCATGTGGCTTACAGACACGCGCCTCAACCACATCGACAAGGGAGGGGAGATATTTGA
- Protein Sequence
- MDEDDVQQFSLRWHNHQNSVIGALGRMFSTGTLTDVTLSASGTTVKAHRLVLASCSQYFAQLFKEVEAENNTLVVVLGCDAAELRLLLTFMYTGEVTASKKVLPSLLRLAQTLKVSGLTDADTNSTLTPTESELPQDETASPVNLEIKNEIQPPQLVNDNSSSSSKLNYDDMLSPTNEKEANFISDYMMKSEKDRLSKLDQIVQNLYSTHKIGNPAATMVTSVPESPEPYDRKWRINSSVCTICNKRLSNQYNLRVHMETHAGRRHACRACSHVSRSRDALRKHVAYRHAPQPHRQGRGDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00072222;
- 90% Identity
- iTF_00909400; iTF_00405150; iTF_01360838; iTF_01198307; iTF_00823174; iTF_01361223; iTF_00441673; iTF_01197930; iTF_00677804; iTF_00442095; iTF_01492533; iTF_00823574; iTF_00824023; iTF_00824343; iTF_01492156; iTF_00636645; iTF_00637837; iTF_01166865; iTF_01167252; iTF_00638302; iTF_00707122; iTF_00707499; iTF_00281528; iTF_00870200; iTF_00869811; iTF_00157693; iTF_00157353; iTF_00822112; iTF_00822525;
- 80% Identity
- iTF_00909400;