Lqua007263.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- dl
- Assembly
- GCA_963576445.1
- Location
- OY754880.1:16547734-16568847[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-38 1.9e-34 119.6 0.3 1 168 26 197 26 198 0.86 2 2 4.2 1.2e+04 -3.4 0.1 64 74 561 571 538 603 0.64
Sequence Information
- Coding Sequence
- ATGGACCCATGGCGTAGCGGTGGAACTTTCGACTGCAACACGAGAGGTCATGAAGCACGAATTAAAGGACCCTACGTGGAGATAGTCGAGCAACCGGTTAGCTGCCGATTCCGGTACCCCAGCGACAAATCAGTGAGTCCAATCCCTGGTGTCTACAGCGGAGAGAGGAAGACGTCCCCGACAATCAGAATACACAACTACACTGGGCACGTTCGTATCGCTGTCTATTGTGTTACCAAAGATGAACCCTATAGACTGCACCCGCACTACCTCGCAGGAGTTATTGGCAAAGATCGGAAATGTTTGGAAGGAGTCTGGGTGACCCGCCATGTTATCACGGAAACATCCAAAGAGTACCATTTAAAGCACATCGGCATCCATTGTGCAAAAAGATTGGATGTGCTTACAGCCCTGAAAGAtaaacaaaaactattaaataaaattgatattgaacCTGACTGCCCTCCTATGaatagttttgagaaaatcgaCTTGAACAGCGTCCGACTCTGTTTCCAAGTTATAACCACCGATAAGGACGGCCACTGCCGCCGCCCCCTATTGCCTGTGATCTCCAATGTTATACACAACACTTTAACTATAAGCAGTCTTAAGATAAAGAAGACTATGCCATCTTCTGGGCCAGTGGAAGGTGGTACTGAAGTTATTCTGCTCTGTGATAAGATAGTAGGTGACGACACGAGAGTAGTATTCTATTTAGAAGAGAATGAACATGAGGGCTGGCAGGCTCCCGCGAAAATAACCCTCGTACACAAGCATTATGCAATTGTCTTCGAAACACCAGCCTACAGGGACCTGAGGATTCGGAAGGACGTCAAAGTTCGTTTTCGGCTGGAAAATGCTTCTGATCAAAGCAATTCATGTGATTTCGTCTACAACCACGACTACAGAGacACACAGCCGCCAGGTCCTCCACTGCAGAGTAATcagtatcCATTATCAAAAAACGAACGAGACGAACAAGTGGCGGGAGGAAACAACGGTTCGAATACGCAAGAAATGTTAGAACAAGACCAGAATCTGCAGTTCGCATACGAATATGTGGAAGACGTGCAGGCGGTGGAACAAGGTTTGAAACAAGAGCCGCAAGAAATACAAAACATGCCCTCACCACCATTTGAGCAGTTTCCGCAGCGAGCCCATCAAATCCAGCAAACAAATAATACACAGTGGCCATTACAAGAAAATGAAACGCCCCGCACAAACTACAATGCAATCGCGCAATCTGATTTAAGACTTTTTATTCCTAATCTCGGGCAACAATGGACACCTACGCAGCAAACATTGTCTGGCCAGCCAGCATCGCATATGCAGCAAATGGCATCTATGCAGGGAATGACACCCATGCATCAAATGTCATCTATGCAGAGTACGACACCTATGCAACAAGTAACAACCGGACAGCCGTCTCCACTCATGCATCAAATGGGATCTATGCAGGGAATGTCACCTATACAGCAAGTAACAGTCGGACAGCCGTCTCCACCCATGCATCAAATGAGATCTATGCAGGGAATGTCACCTAAGCAGCAAGTAACAGTCGGACAGCCGTCTCCACCCATGCATCAAATGACATCTATGCAGAGAATGACACCCATGAATCAAATGTCATCTATGCAGAGTACGACACCTATGCAACAAGTAACAGTTGGACAGCCGTCTTCACACATGCATCAAATGACATCTATGCAGAGAATGACACCCATGCATCAAATATCATCTATGCAGTGTACGACACCTATGCAGCAAGTAACAACTGGACAGCCGTCTCCACTGATGCATCAAATGAGATCTATGCAGGGAATGTCACCTATACAGCAAGTAACAGTCGGACAGCCGTCTCCATCCATGCATCAAATGACATCTATGCAGGGAATGTCACCTAAGCAGCAAGAAACAATCGGACAGCCGTCTCCACCCATGCATCAAATGACATCTATGCAGAGAATAACACCCATGAATCAAATGTCATCTATGCAGAGTACGACACCTATGCAGCAAGTAACAACCGGACAGCTGTCTCCACCCATGCATCAAATGACATCTATGCAGGGAATGACACCCATGCATCAAATGTCATCTATGCCGAGTACGACACCTATACAGCAAGTAACAACCGGACAGCTGTCTCCACCCATGCATCAAATGACATCTATGCAGAGAATGACACCTATCCATCAAGTGACAACCGGACAGCCGTTATCACCCATGCATCAAATGACAAATATGCAGGGAATGGCACCTATGCAACAAGTGGTAGATGGACAGTCAACATCAACTATGCATCAAGTGTCTAGACAGCCAGCAGCATCTGTGCAGAGAATGACATCTATGCAAGAAGTGTCAAATGTACAGCATATTATTAATACACagTGGGCACCAAGTGAAAATGGAATGCCTGCCACAAGTTACAATATGTGGCAAACATACTCTTGCAATGATCCAAACCTTGGGTATCAACCTAATTACAATTTACCAAACACCATGCCACCAGAGCCAAATATGCCGCAAAAGATACCTGGACAGCAAACTAACACAGAACAGGCATATCTCAGTAGTATGGACACGGACAGCTCCGGTATATCTGTATCTAAGCTGATGACGCCAGAAGAACTGTCTGATCTCCTAGTACCCATCACTGTATAG
- Protein Sequence
- MDPWRSGGTFDCNTRGHEARIKGPYVEIVEQPVSCRFRYPSDKSVSPIPGVYSGERKTSPTIRIHNYTGHVRIAVYCVTKDEPYRLHPHYLAGVIGKDRKCLEGVWVTRHVITETSKEYHLKHIGIHCAKRLDVLTALKDKQKLLNKIDIEPDCPPMNSFEKIDLNSVRLCFQVITTDKDGHCRRPLLPVISNVIHNTLTISSLKIKKTMPSSGPVEGGTEVILLCDKIVGDDTRVVFYLEENEHEGWQAPAKITLVHKHYAIVFETPAYRDLRIRKDVKVRFRLENASDQSNSCDFVYNHDYRDTQPPGPPLQSNQYPLSKNERDEQVAGGNNGSNTQEMLEQDQNLQFAYEYVEDVQAVEQGLKQEPQEIQNMPSPPFEQFPQRAHQIQQTNNTQWPLQENETPRTNYNAIAQSDLRLFIPNLGQQWTPTQQTLSGQPASHMQQMASMQGMTPMHQMSSMQSTTPMQQVTTGQPSPLMHQMGSMQGMSPIQQVTVGQPSPPMHQMRSMQGMSPKQQVTVGQPSPPMHQMTSMQRMTPMNQMSSMQSTTPMQQVTVGQPSSHMHQMTSMQRMTPMHQISSMQCTTPMQQVTTGQPSPLMHQMRSMQGMSPIQQVTVGQPSPSMHQMTSMQGMSPKQQETIGQPSPPMHQMTSMQRITPMNQMSSMQSTTPMQQVTTGQLSPPMHQMTSMQGMTPMHQMSSMPSTTPIQQVTTGQLSPPMHQMTSMQRMTPIHQVTTGQPLSPMHQMTNMQGMAPMQQVVDGQSTSTMHQVSRQPAASVQRMTSMQEVSNVQHIINTQWAPSENGMPATSYNMWQTYSCNDPNLGYQPNYNLPNTMPPEPNMPQKIPGQQTNTEQAYLSSMDTDSSGISVSKLMTPEELSDLLVPITV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -