Lsem015514.1
Basic Information
- Insect
- Lithophane semibrunnea
- Gene Symbol
- dmrta2
- Assembly
- GCA_947363905.1
- Location
- OX376210.1:594717-600064[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-28 1.6e-24 86.0 10.8 1 47 36 82 36 82 0.99
Sequence Information
- Coding Sequence
- ATGGAAATGTCTCTCCCGAACGGTGTCGACGTTTCCCAGTTGGTGCAGCACCCAGTGTTGGCCGCGTTGCCGCCGTTCTTCCTCAGAGCTTCGGAACGATATCAGCGGACGCCGAAGTGCGCGCGGTGCCGCAACCACGGCGTCGTGTCGGCGTTGAAGGGGCACAAGCGGTACTGTCGGTGGCGCGATTGTGTTTGTGCTAAGTGCACACTGATCGCCGAGCGGCAGAGGGTTATGGCTGCACAGGTGGCGCTGAGACGGCAGCAGGCGCAGGAAGAAAACGAGGCCCGGGAGTTGAACCTGCTGTACGCCAGTCAGACCACCTCCGCGCCACACCACTATAGTGATCTGCCGGATGAGTCGCCAGACACCTATTTAATTCCCTCCAGTGAGTGTGCCGTCGGCAAGTTGTCCAACCTTTAA
- Protein Sequence
- MEMSLPNGVDVSQLVQHPVLAALPPFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELNLLYASQTTSAPHHYSDLPDESPDTYLIPSSECAVGKLSNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00074554;
- 90% Identity
- iTF_00018210; iTF_00036770; iTF_00038820; iTF_00758216; iTF_01094088; iTF_01527276; iTF_00122445; iTF_00745746; iTF_00924731; iTF_00121491; iTF_00123426; iTF_01526069; iTF_01338807; iTF_01441143; iTF_00906202; iTF_00364076; iTF_01093147;
- 80% Identity
- iTF_00036770;