Basic Information

Insect: Lithophane ornitopus
Gene Symbol: -
Assembly: GCA_948473465.1
Location: OX419640.1:4242936-4255720[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.9 3.5e+02 2.3 2.5 1 23 213 236 213 236 0.88

2 14 9.7 6.8e+02 1.3 0.6 5 19 302 316 301 319 0.89

3 14 0.048 3.4 8.6 0.2 1 23 330 353 330 353 0.91

4 14 0.0052 0.36 11.7 0.2 2 21 391 410 390 411 0.94

5 14 0.92 65 4.6 1.4 1 19 722 739 722 741 0.77

6 14 1.2 86 4.2 2.5 1 23 754 776 754 776 0.95

7 14 0.01 0.73 10.7 0.4 2 23 782 803 781 803 0.95

8 14 0.81 57 4.7 0.7 1 9 826 834 826 847 0.84

9 14 0.0052 0.37 11.6 0.2 2 23 924 945 923 945 0.96

10 14 4.8e-07 3.4e-05 24.3 2.7 1 23 951 973 951 973 0.99

11 14 1.7e-05 0.0012 19.5 0.3 2 23 979 1000 978 1000 0.96

12 14 0.0029 0.2 12.4 1.8 2 23 1007 1029 1006 1029 0.96

13 14 0.46 32 5.5 0.1 1 20 1036 1055 1036 1055 0.92

14 14 0.0023 0.16 12.8 1.8 3 23 1068 1088 1067 1089 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.9	3.5e+02	2.3	2.5	1	23	213	236	213	236	0.88
2	14	9.7	6.8e+02	1.3	0.6	5	19	302	316	301	319	0.89
3	14	0.048	3.4	8.6	0.2	1	23	330	353	330	353	0.91
4	14	0.0052	0.36	11.7	0.2	2	21	391	410	390	411	0.94
5	14	0.92	65	4.6	1.4	1	19	722	739	722	741	0.77
6	14	1.2	86	4.2	2.5	1	23	754	776	754	776	0.95
7	14	0.01	0.73	10.7	0.4	2	23	782	803	781	803	0.95
8	14	0.81	57	4.7	0.7	1	9	826	834	826	847	0.84
9	14	0.0052	0.37	11.6	0.2	2	23	924	945	923	945	0.96
10	14	4.8e-07	3.4e-05	24.3	2.7	1	23	951	973	951	973	0.99
11	14	1.7e-05	0.0012	19.5	0.3	2	23	979	1000	978	1000	0.96
12	14	0.0029	0.2	12.4	1.8	2	23	1007	1029	1006	1029	0.96
13	14	0.46	32	5.5	0.1	1	20	1036	1055	1036	1055	0.92
14	14	0.0023	0.16	12.8	1.8	3	23	1068	1088	1067	1089	0.95

Sequence Information

Coding Sequence: ATGGCGGATACATCCAGAAAAAGGTCGAGAAAGTCGAAATTAGTGCCTCGAGAGTGTGCTGTAGACGAAGATGATCTTGAATTGCAGGTACCAGAGGCGAAAGTACCTAAAACCACGAAACTACCCACCAGACCACCAGTAAAAAAGGTGATAGTAAAACTACCAGAGCCCATTATTTCCAAACCGTCTGGTTTATGCGACACAAGTGTTTTAAAAAAAATCAATGCGTCAGCTAAGGAAGATACAGTGCCACAGTCCACGCTACAGTCTAAAACATCACCAAGGAAATTTGAAATTAAAATTGAAGTAGAATCTTGCGGCAACGACGACGAATTTGCAGGAATTAATGACGAAAAATATTTTCCAACGATTCATAAAGAGTCACTCATCACGACAAAAGTACGCACCGAACCCATAGCACTCACTCGAGAAATTATACTCGATGCTGCTGACAATATACTCAAGAATTCAACTGATATAGCTGATAAAATCCTTAACGTACACGTTAGAAATACCATAGGTTACGAAAATAAAGAGAGACTGGTACTGGATTGGCAAGAGAGTCGGATACAAGAAAGTCTTGATGAATGGCGTTTGTGGCAGTTTCGTAGTTTTCACAGAGAAGCACCACTATTCTATAAATGCTATATCTGTACCAAATCCTGGTGGCATCTAACAGACTTCCGGAACCATTTATCTTCTCAGCACTCTGATGACTCAACCGTTATAATAACTTGGGAAAAATATGAAATGCATGAGGCGAATTTGATAGCCTACCGCAAAAATCATTGGATGGTTGATGTAGAAGATATATATACAGAAGGTCTCTGTTACCGCTGCGGGAAGGATTATGCTGCGCATGAGTTGGAATCGAGGTTTCAAGAGAAGTTTTACAAAAGCAGCGTTTGCAATAAGCAGTTTTTTAGCTGTATGGGTCTAAGAGACCACTTTTCTAGCTGTTCCGTGTGTAAACATAAAAATAAACCATTCAAATGTGATATATGTAAGTCAAGATTTGATACAGTAGAGGAATTAGGCAATCATTTAGTGTTGTCTCATTCTGTTCGATCCGATATACCGATAATGGGTCACTATAAAAACTGCAAGCGCTGTTCAGAAAGGTTTTCTTGTCAATATTTGCACAAATGCGGTCAAAAGGGACCGCATTCAGAGTGTCCCCACTGTCTACAGAGCTTCTCAAATGTCATGTCTTTGGAGATGCATATGGAACGGTCGAGTAAACCATACAAATGTGAAGTTTGCCGAGCTGTGATGACGTACAGCTGTAAGAAATATGAACATATGTTGGCACATACGGACAAATATATGCTTGTAAAGAAGTGCGTGGCATGTGAGGGTTTTAATGTGTTTATAAATAATGAAGATGCAGTATTACATCGGTCGTTGAAACATGAGTTCAAGGAAACAAAACGTCAAAGCTACTTCCCGATAATTTTAGTACCGTCGTCCTGCGTACTTCAAAGTTTAGCAGAATCAGAATCGAAAGAACAAGAATTGGTATTGGAGGAACAAGAAACAGTACTGGACGGAGAAGAATGTGTACCTGGAGAAGAATTTGTACCTGGAGAAGAGTTCGTAACTGGAGAAGAATCTGTACCTGGAGAAGAATTCGTACCTGGAGAAGAAGCATCTGTACCGGAAGAAGAATTGGTATCAAAAAGTGAGAGGGAATCAGTTTCGGTATGTGAGCAGAGGTTGTTACAAGCAGAGCTAGAATCGGCTACAGAATTTTTATTGGGATCCGTTGTAGTCAAGGAAGAGCCAGCAGAGCCAGAAGTCTCAGATGGTAGCCCAGGACTTGTAATCAAAGAAGAAGCATTCGAAGAATTTGAAAACCAAATGCATGAAGGAGAAAATAGAACTGAGAATTTTGAACACGAAGTAAGTGTCAAAGAAGAATTTGTAGAGGAAGAATACGATGAATATGAAGGAGATATTATCAAACTAAACTTTGATATAGAAGACTTATTAGTGAAACAAGAATCCATTCAAGAAGATGACGAATATACTTCAGAACGGACAGAAGGGAACCGACAATCAGAAGACGATGATGATTCAGAAGCATTTTCACAACAATCGAAGGACTCCATGCTTGAACCAGAAGTAATTTTAGCAGGTCATGACAGGAAAAATCAAAAATTATACAAATGTACTAAATGTGGATTCACAGCTAAACATAGTGAATATAGAAGTCACTTAGACTATGACTGTGGTACAAACCCAATCAGTCATAAAACATACCGATGCACAAAATGTGAAAATGTATATGTGTCCATGAAAAAATACTTAACACATTTCAAAGATCATGGTTACAAGCACTTGTCTTGTCCGGAATGCCTGAAAGAATTTGACACATTCACAAATTTGGGGCAGCATTTAACACAACATGTTAAACAAAATTTTGTTCGAGTGAAAATGATCACACATGCTGGCAAGGCCATGACGAAACCTGATTATCAATGCAAGAAGTGTGGGAAAATCATAGCTTTTCATAAATTTTTTGAACATTGGGAGCTGCATATCAATGCTCAGCCTACGCATCCTATTAAAGTGACATCTAGACCGAACCATAAGCATGGAGAATTGCATGAAACTATTATAAAAGAGTGCATTGCTCGTTTGAACAAACAGCCCAAAGAATGCAACCACTGCCACCGTTGGTTCAAAAGAGTTAACGAATGCAAACGTCACATCATTGAACATCTATTATCTGACGCATACAACCAGAAACACATATATAAGGAGCTGAAATGCCAAGTATGTGAACAAGGCTTCGCTGTACCAGAGAGATACAAACAACATATGCGTGACCATGCTTCGCTACCCGTGTACAAGTGTGAACTGTGTGACCGTACCTTTAGTGACTCTAGTAACTTTACCAAACATAAAAAGGTTCATAATTTGAAAGTGATTGTGTGTGACTTGTGCGGCAAAAAGTTCCAGTCCAAAGTGTCCTTGGAGAAGCATATTGAGAAGCACAAAAGCACGGAGCCCATTACCTGTAAGATTTGCAACAAAATCTTCTACTTCGACACTTCTTACCGGCGCCACGTTCGCTACTTCCACGAAAAAACCGTCATCGGTTATCGCTGTGTTATCTGCAGTGAACGATTCGAGAGTTTAAAGCTTAAATGGGATCATATGTGGGATGTACATAAGGAAAGGAAGCAAAAAGCAGATTGTCCCATATGTCATCAGTCGTTCAGAAAATATGCCGATGTTCGTATCCACGCGAGGCTTCACCATTTGACAGAAGTTTCGGTGTTAAATGTCAAAAAAAAAACATCAAATCCCAATTTAAATATTGATACGTATTTGAGGGATCCTGCTAAGATTAAAGTTGGGACGATGGAGACTTTAGTTGTTTATGATTCAGATTGA
Protein Sequence: MADTSRKRSRKSKLVPRECAVDEDDLELQVPEAKVPKTTKLPTRPPVKKVIVKLPEPIISKPSGLCDTSVLKKINASAKEDTVPQSTLQSKTSPRKFEIKIEVESCGNDDEFAGINDEKYFPTIHKESLITTKVRTEPIALTREIILDAADNILKNSTDIADKILNVHVRNTIGYENKERLVLDWQESRIQESLDEWRLWQFRSFHREAPLFYKCYICTKSWWHLTDFRNHLSSQHSDDSTVIITWEKYEMHEANLIAYRKNHWMVDVEDIYTEGLCYRCGKDYAAHELESRFQEKFYKSSVCNKQFFSCMGLRDHFSSCSVCKHKNKPFKCDICKSRFDTVEELGNHLVLSHSVRSDIPIMGHYKNCKRCSERFSCQYLHKCGQKGPHSECPHCLQSFSNVMSLEMHMERSSKPYKCEVCRAVMTYSCKKYEHMLAHTDKYMLVKKCVACEGFNVFINNEDAVLHRSLKHEFKETKRQSYFPIILVPSSCVLQSLAESESKEQELVLEEQETVLDGEECVPGEEFVPGEEFVTGEESVPGEEFVPGEEASVPEEELVSKSERESVSVCEQRLLQAELESATEFLLGSVVVKEEPAEPEVSDGSPGLVIKEEAFEEFENQMHEGENRTENFEHEVSVKEEFVEEEYDEYEGDIIKLNFDIEDLLVKQESIQEDDEYTSERTEGNRQSEDDDDSEAFSQQSKDSMLEPEVILAGHDRKNQKLYKCTKCGFTAKHSEYRSHLDYDCGTNPISHKTYRCTKCENVYVSMKKYLTHFKDHGYKHLSCPECLKEFDTFTNLGQHLTQHVKQNFVRVKMITHAGKAMTKPDYQCKKCGKIIAFHKFFEHWELHINAQPTHPIKVTSRPNHKHGELHETIIKECIARLNKQPKECNHCHRWFKRVNECKRHIIEHLLSDAYNQKHIYKELKCQVCEQGFAVPERYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIVCDLCGKKFQSKVSLEKHIEKHKSTEPITCKICNKIFYFDTSYRRHVRYFHEKTVIGYRCVICSERFESLKLKWDHMWDVHKERKQKADCPICHQSFRKYADVRIHARLHHLTEVSVLNVKKKTSNPNLNIDTYLRDPAKIKVGTMETLVVYDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01526599;
90% Identity: -
80% Identity: -