Lorn000764.1
Basic Information
- Insect
- Lithophane ornitopus
- Gene Symbol
- -
- Assembly
- GCA_948473465.1
- Location
- OX419613.1:22449209-22449757[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-09 5.5e-06 26.3 0.0 5 40 2 38 1 40 0.94
Sequence Information
- Coding Sequence
- atgttagagttagcggttgacatggtagaaaataacagaatgtcaagtcgggaggcagaaaagaggttcgggatccctcgacggacgatattgaacaaagttaaaaaaaatcacttaaaaccagctggaggacaaaagaaactcactgacgaagaggaagaaaaactggcaaacgtgttgttagcttcagctgattacggcagccccatgacgaaaatggacgtaaaaatgttagtctataaatatgtcgaaaaaaattcacggactgatttgttcgatggcaaattacccagtgatacgtgGGTGGAAGGATTTTTAAACAGACGTCGTTCAAAATTGACCATCAGAACGACTCAAAATATTAAAAAGATACGGGCAGAGAAAGGATTAGAAGAAATGGAGCAATTTTATGCTAATTTAAGTGAAACACTAAGAGATGTACCACCGATGAACATACTGAACTACGACGAGACTAACTTGGCCGACAATCCAGGTACTTCAAAATGTGTTTTTAGAAGGGGCGTCAAACATCCTAAGAATTCTAAATAG
- Protein Sequence
- MLELAVDMVENNRMSSREAEKRFGIPRRTILNKVKKNHLKPAGGQKKLTDEEEEKLANVLLASADYGSPMTKMDVKMLVYKYVEKNSRTDLFDGKLPSDTWVEGFLNRRRSKLTIRTTQNIKKIRAEKGLEEMEQFYANLSETLRDVPPMNILNYDETNLADNPGTSKCVFRRGVKHPKNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00375120;
- 90% Identity
- iTF_00357413;
- 80% Identity
- -