Basic Information

Insect: Lithophane leautieri
Gene Symbol: clz9
Assembly: GCA_949152455.1
Location: OX424471.1:2183804-2186362[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.6e-09 8.8e-07 29.2 0.1 1 35 14 48 14 56 0.92

2 2 2.1 1.2e+03 0.0 0.0 25 39 771 785 770 787 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.6e-09	8.8e-07	29.2	0.1	1	35	14	48	14	56	0.92
2	2	2.1	1.2e+03	0.0	0.0	25	39	771	785	770	787	0.84

Sequence Information

Coding Sequence: ATGCCACGTACCTACGTCCGTAAGAAAGTTAAACCATATACGCCAGAAGACTTAGCCGAGgcgttacaaaaaataaaaaatggagaaCTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGTGAAAATATGCATTCTAAGTATGCCAGGCCAACTGCAGGTAGACCTACAATCTTTTCATCGGAAGAAGAAGAACGTTTAGCAGATGccataaaaataatggaaaaatGGGGATTTGGATTGTCAAGACAAGAAATTTTAGAAATTGTCGCTGAATACGTAAAGGCAAATCAGATTAAAACgccatttaaaaataacacGCCCGGTCCAGATTGGTTCATCAACTTCCGCAAACGTCACCGCCTCTCTATAAAGAAAGCACAGCCCGTGGAATATGTACGCAAAAAAATGACGGATCCATTTTTCATTTTCGAGTACTTCGAGTTGCTAGAAAAGACTTTGATAGAGTTGGATCTTATTGACAAACCTCAAAACGTCTGGAATCTAGATGAAACGTCTCTGTGTCTGGACCCTACTAGAACAAAAGTAGTGGGAGCCATCAATAAACCCTGTGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCACCTTTAATTGTGTTTAAAGGAAAATATGTTTGGGATCAGTGGATGGCTGCAACAGATGATTACGACTTCGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACCGACATTTTCTATAACTACATGAAAACGATTCTCATTCCAAGTGTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGATGGCCACTCTACCCATGTCGATGTAAAAGTTATAGAATTGGCAATTGAAAATGGCATAACCATTCTCAAGCTCCCACCACATACATCTCATTTGCTTCAACCGCTTGATATAGCAGTTTTCAAATCCTTTAAGAGCAAGTGGGATGCCAAACTAGTCGACTGGCAGCGTCGAAACATTGGCACTAAAATGGCGAAAAACATATTCTCGAAAACACTTGCTGATACATGGCAAGAAACCGCACCCGACATCATTAAAAATGGGTTTAAAAAAGCTGGAATTTTTCCGTTTGATGCCAGTGTTATACCTGTGGAAAAGTACGATCCAAATGCCTATAGAAGGTACCAGTTAATAAGAGAAGATCGTTTGCTCCAAAGTCAACAAAATACAAGTAGTCCGGAATCATTGAAAAAAATTTGTATCGATTATTTTAATGAACAGAATAACATACCTGACGCAACTCTTCACAAACAGTGCCCACCGGACCAACAAAACGACACTCTTGGGGAACCGAAGTCTACAAACCACCAATTTACTAATATGCCAACTGAAAATGTAAACTTATTATCTCAAATTTCAAAATCTGATAGCCAGATGACGGTTTTTTTAGCTGAAGATTCAACCTCTATGCCAACATGTTTAAAAGAAGGTCGTTCTGATCCGAAAAACAACGAAACAGTTAAAAAtcctaatttaattataacatcTAACATTGTCATCAAAAAATCCTCCATAACTTTAAATGCAGCGCCACAAACACCTCTTTCACCAGCATCTCCAAGAATCTTCACATTTGAAGAAGCTTTTCTGAAAAAGATACAACaggaaaagaaaaacaatgatactgtgataaaaaaaaaacgtatctcAAAAGGTGCCGAAGTGATAACCAAGTCTATGAGTAAGAAACAAGAATCTAAAGACGAAGATAAAGTAACTAAGAAAAGTATGAAGAAGCAAGATAACAAGGATAGTCAGAGcaaaaattctaaaacaaaatttaaacaaaacttggATAAAAATCGACCGGGTACCTCAGGCCTTcaaaaaagtacgaagcgaaAGCGCGTCCCTTCAATGGATTCCACAACAAGTATATCGGATATAATGAGCGTGTATAGTGACTCAGAACTACTTGATTTTGATGACTTTGAAGAATTTCATGTATTTAAAGAAGATTTTACCCCACTAAATATAGACAATAAACGAAGAAACGAAGAATcacataatattagtttaagAAAGGGAAAAGGTAAAggcaaaaaaagtattgaatgtaaagaaaaccaaaccaaaaatgaagaaaatgaaAGTGACAGCTGTATGAGTGgaagtcataaaaaaatcttgaagagtgctaaaaaaatagaaaaaggcGAACGCTATCAAGACAGTGACATAAAAGAGGATAGTAGTGATAGTAACGAAAATTACAACAACAATGAAAGGaatgacatttttaatataaacgaCACGGTCCTAGTAAGATATTTTATGAGGAACAAATGGGTTCACTATATAGGGTTTATCGAGAAAATTGACCAGCTGGATGTAGAAACTTACTTCACTATTGATTTCTTAAAAACTGTAAAGAAACCACCCCTAATATTTGTAAAACCAAAAAGAAAGGATTGTGACGTAGTTCCGAAGGCATCaatcgtaaaaataataaaaattgaattaaaaaatgataataaaaaataa
Protein Sequence: MPRTYVRKKVKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSENMHSKYARPTAGRPTIFSSEEEERLADAIKIMEKWGFGLSRQEILEIVAEYVKANQIKTPFKNNTPGPDWFINFRKRHRLSIKKAQPVEYVRKKMTDPFFIFEYFELLEKTLIELDLIDKPQNVWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLIVFKGKYVWDQWMAATDDYDFELSYAASPKGWMQTDIFYNYMKTILIPSVGQERPVLLVYDGHSTHVDVKVIELAIENGITILKLPPHTSHLLQPLDIAVFKSFKSKWDAKLVDWQRRNIGTKMAKNIFSKTLADTWQETAPDIIKNGFKKAGIFPFDASVIPVEKYDPNAYRRYQLIREDRLLQSQQNTSSPESLKKICIDYFNEQNNIPDATLHKQCPPDQQNDTLGEPKSTNHQFTNMPTENVNLLSQISKSDSQMTVFLAEDSTSMPTCLKEGRSDPKNNETVKNPNLIITSNIVIKKSSITLNAAPQTPLSPASPRIFTFEEAFLKKIQQEKKNNDTVIKKKRISKGAEVITKSMSKKQESKDEDKVTKKSMKKQDNKDSQSKNSKTKFKQNLDKNRPGTSGLQKSTKRKRVPSMDSTTSISDIMSVYSDSELLDFDDFEEFHVFKEDFTPLNIDNKRRNEESHNISLRKGKGKGKKSIECKENQTKNEENESDSCMSGSHKKILKSAKKIEKGERYQDSDIKEDSSDSNENYNNNERNDIFNINDTVLVRYFMRNKWVHYIGFIEKIDQLDVETYFTIDFLKTVKKPPLIFVKPKRKDCDVVPKASIVKIIKIELKNDNKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01076362;
90% Identity: iTF_01076364;
80% Identity: -