Llea021302.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424480.1:4832057-4832434[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-12 4.1e-09 36.7 0.0 2 36 12 46 11 50 0.94 2 2 6.6 3.7e+03 -1.6 0.0 2 10 85 93 84 94 0.81
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGTATACAGTGAAGCACAACTCGCCGAAGCAATCAAAGCCATTAATAACGGTACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCCAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGATATTTGTGGAGTTCAGCCGGTTCTTAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGGCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCAGATACTGGTTTGAGAATTTTATAAAGAGACATCCATTTATCTAA
- Protein Sequence
- MEPQKRRKVYSEAQLAEAIKAINNGTSVYEASKRFNIPKTTLRDKRDGKYKNDICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLGQNLNRPNPFKNGVPGRYWFENFIKRHPFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538665;
- 90% Identity
- iTF_01538665;
- 80% Identity
- -