Lnyc000119.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Listrodromus nycthemerus
Gene Symbol
dl
Assembly
GCA_963978505.1
Location
OZ021679.1:1146035-1149066[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.6e-75 2.3e-71 239.1 0.0 1 169 66 236 66 236 0.99

Sequence Information

Coding Sequence
ATGGAACCTTTCTGCGGAATGAGCGACAACAATATAAACATAAGCGATGTCATTGAAGTCATCCAGACTACGGACCCTGGATTTGTCGAGGCGGAACAGCACAGCTCTGTCAGGCAGACGATAAACATGTTGTCCGGTGGAGGAGTCGAGGCCATTAGGCCAGTTCCCATAAATGTCGGCTCCATGTCTCCCTACGTGGAAATTTTGGAGCAGCCAGCTAGCAAGGCTCTTCGCTTCAGGTACGAATGCGAAGGTCGCTCCGCTGGCAGCATACCTGGAGTCAACAGCACACCGGAGAACAAAACGTTTCCTAGCATAAGAaTCGTAGGCTACAAGGGACGAGCCGTCGTTGTCGTTTCATGCGTCACGAAAGATCCGCCGTACAGACCTCATCCGCACAATCTCGTCGGCAAAGAAGCGTGCAAACGCGGCGTCTGCACGGTCGAAATTGCCACGGAGAACATGACCGTTACGTTCGCGAATTTGGGTATTcagtgcgtgaaaaaaaaagacatagaGGACGCCCTGAGGGTGAGAGAGGAGATCCGCGTCGATCCGTTTCGAACTGGTTTCGAACACAGGAGACAACCGACGAGCATCGATCTCAACGCCGTCAGATTGTGCTTCCAAGTCTTCCTCGAGGGAACGGAAAAGGGAAAGTTCACGGTTCCCCTTGCGGCTGTCGTCTCCGATCCAATATACGATAAAAAAGCGATGTCCGACCTGGTGATCTGCAAGCTCAGTCATTGCAGCGCCTCGGTGGCGGGCGGGCTGGAGATGATTGTGCTCTGCGAGAAAGTCGCCAAGGAGGACATACAAGTCAAATTCTACGAGGATCGCGACGGACAAATCGTTTGGGAAGGCTACGGAGATTTTCAGCCTTCGCAGGTTCACAAGCAGGTGGCGATCGCGTTCAGGACACCGACCTACCGTATACAACAAGTCGAGCAGCCCGTTCAAGTGTTTATACAACTGAAGAGGCCGTCGGACGGGGCAATCAGCGAGTCTCTTCCCTTTCAGATGTTACCCTTAGGTTCAGGTAGGCCCGCCTTCTGGTCGTTGCGCAAAGCTTTCGCCAGAAAGAAGGCCGACTATAATACATTCAATAAGATACTCGCGACCGAGGCGGCAATGCTCGCCAGCGATTCCCCCCAGAAGTTCGCTCGTAAGATCGACCAGTTTAACAACAACGATTTCGAGCCTACGCGCACCCCCAGTAAGATATCAGCCCTGCGGGCTCTCAACGATCTTTACAATGTGAGAAACAACGTGGACTTGAACATTGGCGTTTTTCCGTCGAAATCTGCCAATTCCGTGACGCCAACTGGTCCGTATGCAAAGAGCACGACGGTAGACTTGGAGAACAACGAGATTATCTCCGTACCGGATGAAACTTCACGAGccgaaaatgatgaaaaattattcggtcaCAGTTCGAACGCCAATCATCTGTATCTGGATAACGAGCAACTGATCGGCCAGAGCGCGGACAATGGGAATCACCCAGAAACGAATATCGCTAATCCCGATACGATTATGCTGGAGAAAGCACAAACCGACAAGGCCAGATCCGATTGGTTCGATTACACGGAAGTTGGCAAGTGGGTGGAAAAAGGGCAGGAGTGTCTGGCGGCGGCGGAGACCGAAGAGAAAAACGATGACGACAGCAGCAAGTCTCTCAAGGAGCTGCTGACTCAGGTGGCGGAGCTCGATCAGATATATGcggacacacacacgaaaataattcgagccGGTCTCGAGCGAGACGACAGTGATCGGCAAATGGAAGTGGACGTCTGCGACAATCAGACCTACACGAGCCTGCAGATGGCAATGAAGAATCCCGTCGAACTGTTCGACATCAACAACGACAGAAAGTACGAGGATGTTAATATATCTCTGCCCGAATCGACGATGACACCGGCCTCGCCGCCACCCCTCGTGGCCAAGAGAGATCCGACGAGGGAGCCCGAGGAGAGGCTTCCGCCTCTGCCGCCCAAGCGCATCCGAAAAATGCCGTCGATGCCGGTCCTGTCTCGGATATCCTCGTGTCAGACGATAATCGAGAGCTCCGAGGCGCCGCACAAAAATTTACCCTCGCTTCCGGGGACTCTTCTGAAACCCTCCAAACAGGgtattttctcgaaactctTCACCAAGCGAAGCAAGAAGGACAAGGATCTTTCCGGAGGTTGTGTGGAAACCGCGATAACGAACAGCAGCAGATCGCTGAACGTTCGCGACAGCATAACGTCTTTATCGAGAAACAGCGAGACTGAAGTTTCCCATTCGCCGCCTTTACCCAGACCAAGCATGGCCAGTGTGACGAGCGTCAAATCCTTCGAGCTCAACGGCGACGAGAATCCACTTTACGGAATGGATCTCACCGAGGCGGAGCACTATGCGTTGTACACAGCCATGGCTCCTCACGCAACGACTTCGGAGTTCGACGAAATGTCCTTCTACTACAGCCCCGTCGAGGGCGGAAAAATTTTGACCGAAGCCAAGGAGTCTTAA
Protein Sequence
MEPFCGMSDNNINISDVIEVIQTTDPGFVEAEQHSSVRQTINMLSGGGVEAIRPVPINVGSMSPYVEILEQPASKALRFRYECEGRSAGSIPGVNSTPENKTFPSIRIVGYKGRAVVVVSCVTKDPPYRPHPHNLVGKEACKRGVCTVEIATENMTVTFANLGIQCVKKKDIEDALRVREEIRVDPFRTGFEHRRQPTSIDLNAVRLCFQVFLEGTEKGKFTVPLAAVVSDPIYDKKAMSDLVICKLSHCSASVAGGLEMIVLCEKVAKEDIQVKFYEDRDGQIVWEGYGDFQPSQVHKQVAIAFRTPTYRIQQVEQPVQVFIQLKRPSDGAISESLPFQMLPLGSGRPAFWSLRKAFARKKADYNTFNKILATEAAMLASDSPQKFARKIDQFNNNDFEPTRTPSKISALRALNDLYNVRNNVDLNIGVFPSKSANSVTPTGPYAKSTTVDLENNEIISVPDETSRAENDEKLFGHSSNANHLYLDNEQLIGQSADNGNHPETNIANPDTIMLEKAQTDKARSDWFDYTEVGKWVEKGQECLAAAETEEKNDDDSSKSLKELLTQVAELDQIYADTHTKIIRAGLERDDSDRQMEVDVCDNQTYTSLQMAMKNPVELFDINNDRKYEDVNISLPESTMTPASPPPLVAKRDPTREPEERLPPLPPKRIRKMPSMPVLSRISSCQTIIESSEAPHKNLPSLPGTLLKPSKQGIFSKLFTKRSKKDKDLSGGCVETAITNSSRSLNVRDSITSLSRNSETEVSHSPPLPRPSMASVTSVKSFELNGDENPLYGMDLTEAEHYALYTAMAPHATTSEFDEMSFYYSPVEGGKILTEAKES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01364400;
90% Identity
iTF_00059216; iTF_01364400; iTF_00058451; iTF_00721020; iTF_00057693;
80% Identity
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