Basic Information

Insect: Lissocephala sabroskyi
Gene Symbol: Znf574
Assembly: GCA_037075105.1
Location: JBAMCP010001702.1:9613-11853[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 1.7 9.9 0.6 1 23 334 357 334 357 0.97

2 10 1.3 1.6e+02 3.6 0.2 6 23 367 384 367 384 0.97

3 10 5.3e-05 0.0067 17.4 1.5 1 23 390 412 390 412 0.98

4 10 0.00027 0.033 15.2 2.8 1 23 425 448 425 448 0.94

5 10 0.00015 0.019 16.0 0.7 1 23 456 479 456 479 0.97

6 10 6.9e-06 0.00086 20.2 1.3 1 23 485 508 485 508 0.93

7 10 0.0045 0.57 11.4 0.4 2 23 520 542 519 542 0.97

8 10 6.5e-05 0.0082 17.2 4.1 1 23 549 572 549 572 0.93

9 10 4.3e-07 5.4e-05 24.0 1.3 1 23 578 600 578 600 0.98

10 10 6.8e-05 0.0085 17.1 1.3 1 23 606 629 606 629 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	1.7	9.9	0.6	1	23	334	357	334	357	0.97
2	10	1.3	1.6e+02	3.6	0.2	6	23	367	384	367	384	0.97
3	10	5.3e-05	0.0067	17.4	1.5	1	23	390	412	390	412	0.98
4	10	0.00027	0.033	15.2	2.8	1	23	425	448	425	448	0.94
5	10	0.00015	0.019	16.0	0.7	1	23	456	479	456	479	0.97
6	10	6.9e-06	0.00086	20.2	1.3	1	23	485	508	485	508	0.93
7	10	0.0045	0.57	11.4	0.4	2	23	520	542	519	542	0.97
8	10	6.5e-05	0.0082	17.2	4.1	1	23	549	572	549	572	0.93
9	10	4.3e-07	5.4e-05	24.0	1.3	1	23	578	600	578	600	0.98
10	10	6.8e-05	0.0085	17.1	1.3	1	23	606	629	606	629	0.97

Sequence Information

Coding Sequence: ATGGCCAGCTGTGTCCTTTGCCTGGAGAGCCTCGGTGAAATTCGCCAATCAATTGCCGTTGGATCCGCCGAGGGCTTGCGGCTCAAAATTTGCGAAGCCGTCAACAAGCATTTTTGGCTGGAGCTCACCATCAATGGACACACCGATGCCCGCAAACGAATCTGCCTTGAGTGCTGGCAGTACGTCAAGAGCTTCAACGAGTTCTACCAGCGCGTCTACGAAATCCACGCCCAGCAAAGGCAAAGCCTGGGCAGGAGCGCCCCGATTGAGTTCTTTGCCGAGCCCTTGAATCCCCTGGGCCCTGAGGACAACACCTCGGAGATAGatgccctggccgagggcttCTTCGCACCCAACGACATTAAAGTGGAAATACACGAGCTGGAAATGCTGCCCAAGGATGCCGAGCTTCAGGATCCTGTGGACACGACGACGCCCATGCCCCACACCACCAGCAAGAAGCTAGGCAACAACCCGGGCTCGGCCAGTGGCAGAAAGAAGGTCAAGTGCGAGAAAATCTCGGCTGGCAGTGACTCGGAAGTCGATATTCCGCTGGCGGACTTCCTGACCACAGACATCAAGACTGATTCGAATACCTCGATCCCCTCGCCGGAGGAAACGAAGCGCAAGCAGCCCCTGCGCCGTTCAGGTCGCATGCGCAAATCCAGCTCAGCTGCCTCCGCCTGGGACCTAAAGGAGGAGCTGGAGTCCGACGTGGACATAGGCGACTTCGAGTTTGGACCtgccgccgggctgggcaCTGACGACAGCTCCACCTCCAGTTCCAGCAGTGAGGAAGACTCCGCAGACAGCCTGCCAGATGTGGAGCCCGTCGAGCGCTACGCCGTGATACCCAAGCGCGTGGTGGTCAAGCCCAAAAAGTATAGGAAGCGGCCGAAGCCCGTGGAGCCGCCGGTGCGGATGTCGCGCGAGGAGATCGAGCGCCGCAAAAAGCAGCAGGACGAGTACGATGCCATCATAGTCAAGTTCTTCAACAGGTTTCCCTGCCACATATGCAATCTGCTGGTGCAGAACTTCGGCGACATGCGCCGCCACTTGCGGATGGCCCATCAAATCGAGTCGGGCTTTATGCTCTGCTGCGGCCGCAAGTTCCACATACGCAaggcgctggccgagcacGTGCTGGTCCACTGGAATCCCGAGCAGTTCAAGTGCACGAAATGCGATCGCAACTTCCAGGACTCGCGGTCCCTGGAGATCCACGAGCAGTCGCACACCAACCCCCAGGCGGAGGTCAAGGAGAAGCGCGTCTTCCACTGCGAGAAGTGCCCCAAGACCTTCACCAGCAAAGCCTCCATGGAGTATCACACGGCTTCCAAGCATGTGCCCAAGTCGGACTTCAAGTTCACCTGCCCCGAGTGCAATAAGAAAGTCCCCACGGAGCGCAAACTCAGGGAGCACCTGAAGTATATGCACGATCCGGAGACGGCTTTCATATGCGACAAGTGCGGCAAGACGGTGCGCTCCCAGGCGAATCTCAAGAAGCACCACGAGCTGGAACATTCCGACGAGCCGCGGCCCAAGCCCGACCCCGTCCAGTGCGGCATCTGCGGCACCTGGCTGCGCCACGTGTCCGGCCTCAAGCAGCACATGAAGACGATACACGAGCCGCCCGGCGAGGAGCACCGCTGCCCGATCTGCAACAAAACCTCCACCAACTCGCGGGCCCTCAAGCGCCACATCTACCACAACCACGAGTGCGAGCGCAAGTTCAAGTGCACCATGTGCGACAAGGCCTTCAAGCGCCCGCAGGACCTACGGGAGCACACTTCGACCCACACCGGCGAGGTGCTCTACACCTGCCCCAACTGCCCCATGACGTTCTTCTCGAACGCCAACATGTACAAGCACCGGCAGCGCCTGCATCGCGCCGAGTGGGAGGCCGACCGCAAGAAGCCGATGCCGCCGAACATCATGCAGCAGGCGATGGGCGCCACCTCCGCCATGAAGAAGCGGCAGACGGCCCACGTGAGCACGCCGCTCTTCAACCAGCCGGCGCCGGCGCAGCCCCTGCAGCTGCCCCAGAAGACGGAGCCGAGTGTGTGA
Protein Sequence: MASCVLCLESLGEIRQSIAVGSAEGLRLKICEAVNKHFWLELTINGHTDARKRICLECWQYVKSFNEFYQRVYEIHAQQRQSLGRSAPIEFFAEPLNPLGPEDNTSEIDALAEGFFAPNDIKVEIHELEMLPKDAELQDPVDTTTPMPHTTSKKLGNNPGSASGRKKVKCEKISAGSDSEVDIPLADFLTTDIKTDSNTSIPSPEETKRKQPLRRSGRMRKSSSAASAWDLKEELESDVDIGDFEFGPAAGLGTDDSSTSSSSSEEDSADSLPDVEPVERYAVIPKRVVVKPKKYRKRPKPVEPPVRMSREEIERRKKQQDEYDAIIVKFFNRFPCHICNLLVQNFGDMRRHLRMAHQIESGFMLCCGRKFHIRKALAEHVLVHWNPEQFKCTKCDRNFQDSRSLEIHEQSHTNPQAEVKEKRVFHCEKCPKTFTSKASMEYHTASKHVPKSDFKFTCPECNKKVPTERKLREHLKYMHDPETAFICDKCGKTVRSQANLKKHHELEHSDEPRPKPDPVQCGICGTWLRHVSGLKQHMKTIHEPPGEEHRCPICNKTSTNSRALKRHIYHNHECERKFKCTMCDKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPMPPNIMQQAMGATSAMKKRQTAHVSTPLFNQPAPAQPLQLPQKTEPSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00905075;
90% Identity: iTF_00905075;
80% Identity: iTF_00905075;