Lsab012775.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Nfat5
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010005337.1:1-3134[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-38 1.4e-34 120.1 0.8 1 168 33 192 33 193 0.97 2 2 0.033 2.3e+02 2.3 0.0 45 71 289 315 278 334 0.81
Sequence Information
- Coding Sequence
- TTCATTTCGACCCGCACGGTGACCCGCGTGGCCAACAAGCGCCAGCCAGTTGCCCCGCTGAACAGCATGGCCACCTCCCTGGACAACCAAGTCCATCTGGAGATCATTTCCCAGCCCGAACAGCAGCACCGCGCCCGCTACCAGACCGAGGGCAGCCGCGGGGCCGTCAAGGATCGCAGCGGCAACGGCTTCCCGATTGTGCGGCTGAGCGGCTACGACAAAACCGCCGTCCTGCAGGTTTTCATCGGCACGGACATTGGCCGGGTGGCCCCGCATATGTTCTACCAGGCCTGCAAGGTGGCCGGCAAGAATTCCACCCAATGCAATGAGAAGAAAGTCGACGGGACAATGGTGATTGAGATTGACTTCAAGCCGGAAACCGACATGACCATCACCTGCGATTGCGTTGGCATCCTTAAAGAACGCAATGTTGATGTGGAGCATCGGTTCCCGGAGCATTTGGCccagaagaacaagaagaagtcCACGCGCTGCCGCATGGTCTTCCGCACTCAGCTGACCCGCGACGACGGCACCACGGAGACCCTGCAAGTCTGCTCGAATCCCATTATTTGCACCCAGCCGCCTGGCGTGCCCGAGATTTGCAAGAAGTCGTTGAATTCTTgcccggccgacggcggcCTTGAGTTGTTCATTATCGGCAAGAACTTCCTGAAGGACACTCATGTCGTCTTCCAGGAGACCTACGACAGCGTCAATCCCGACGATCCTGCCACGGAAATCGCTGTACGCCAGCAGCTCATTGCCGGCTCGGCCGCCCTCTGGGAGCAAAGCGTTCTGCCCGACAAAGAGTATTTGCATcagACCCATTTGATTTGCACGGTGCCGCCGTATCTGCATCAGAACATCCTGAAGCCGGTGGTGGTGCAAGTGTCGATTGTGTCGAGCGGCAAGAAGAGCGAACCGCACAACTTCACCTACACACCGAAGGGCACCTACACGACCCTCGCAGCGGCCAGCATGTTAAGTAACACAATTCATGGTACTTTAACGGCAGCCCAAG
- Protein Sequence
- FISTRTVTRVANKRQPVAPLNSMATSLDNQVHLEIISQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLSGYDKTAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTMVIEIDFKPETDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTRDDGTTETLQVCSNPIICTQPPGVPEICKKSLNSCPADGGLELFIIGKNFLKDTHVVFQETYDSVNPDDPATEIAVRQQLIAGSAALWEQSVLPDKEYLHQTHLICTVPPYLHQNILKPVVVQVSIVSSGKKSEPHNFTYTPKGTYTTLAAASMLSNTIHGTLTAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802604; iTF_00470638; iTF_00556335;
- 90% Identity
- iTF_00556335;
- 80% Identity
- -