Lsab005256.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lissocephala sabroskyi
Gene Symbol
dl
Assembly
GCA_037075105.1
Location
JBAMCP010000761.1:22186-25211[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-74 1.6e-70 237.1 0.1 1 169 57 227 57 227 0.99

Sequence Information

Coding Sequence
ATGTTTCAAAATCAGAATTCGGTGGCTCCCTCGAACGGGGCCGGCGGTGCTGCGGGTCCTGGGGCCCCGCCCATGGAcgcccaacagcaacaaaatctcAACTACAACGGCCTcccccagcaccagcagcagcagcagggcggcAAGAATGCCCGGAAGAAGCCTTATGTAAAAATCACAGAGCAACCCGCAGGAAAGGCTTTGCGGTTTCGCTATGAATGCGAGGGCCGTTCGGCGGGCTCGATTCCGGGAGTGAATTCCACGCCCGAGAACAAAACCTATCCGTCTATAGAAATCGTGGGCTACAAGGGCCGCGCCGTGGTGGTCGTTTCTTGCGTGACCAAGGACCCTCCACACCGACCCCATCCGCACAATCTGGTGGGCAAGGAGGGCTGCAAGAAGGGCGTGTGCACCCTGGAAATCAACAGCGAGACCATGAAAGCCGTCTTCAGCAATCTGGGCATTCAGTGCGTCAAGAAGAAGGACATCGAGGCAGCCCTCAAGGCTCGCGAGGAAATCCGTGTGGATCCATACAAAAccggCTTCTCACATCGTTTCCAGCCGTCCAGCATCGATCTGAACTCGGTGCGTCTGTGCTTTCAAGTATTCATGGAGAGCGAGCAGAAGGGACGCTTCACCCAGCCCCTGCCGCCGGTGGTGTCCGAGCCGATCTTCGACAAGAAGGCCATGTCCGATCTGGTGATCTGCCGGCtgtgcagctgctcggccaccgTGCTGGGCAACACGCAGATCATCTTGCTGTGCGAGAAGGTAGCCAAAGAGGACATCACGGTGCGCTTCTTCGAGGAGAAGAACGGCAACCTATGGGAGGCTTTCGGCGAGTTCCAGCACACCGATGTCCACAAGCAGACTGCCATCACCTTCAAAACGCCCCGCTATCACACCCTCGACATCACCGAGCCCGCCAAGGTTTTCATACAGTTGCGTCGACCGTCGGACGGGGTTACCAGCGAGGCCTTGCCCTTCGAATATGTGCCATTGGACTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCATCTCAAGCGGAAGCCCGACGAAGACATATTTCAGCAAATTCTCTCGTTGGACTCGGCCAACGCCAAGCGCGAGGCTCCCACGATCGAGGTCATCGATCTGAATACCCCAGTCCTCGAGCAGACCGAGCTCAGCATCGAGCAGGCATTTGCCGAGGCCCCAGTGCCGCCAGTGGATGAGGAGGCCGAGAGGCTGCGCACCGAACAGGAAATCGACACCATAATCGACGAGAAAGTCCGCGAGCTGGAGCAACAggaccagcaacagcagcaggactcATTTGAGACTCAACCGCCAACGGCGGACGAGAAAATAACCGAGTGGATGAAGTCAAACGAAGACATGCAGGCCCCCGAGGGGGATCCTGTGTTGGGCAGCGCCCAATTGGAGGCCACGGccgagccgccagccaacgAAGAGGACAAAACCCTCAACGATCTGCTCGAGCaggtggccgagctggacgagATCTACACGGACTACGTGATCCGCCGGGACACCTACAACAACACGCTCCAGAACGAGTTGCAGAGCATGGACAAGGCCGAGGCCACTCGCCCGCCCTTGGAGGTGGAGGACAGCTTCGACGATGCTGCCACTTATACAAGCTTGCAGATTGCCTTCAAGAACCCCGTGTCCATACCCATGGAGGATCTAATGCCACCCACTCCGCCCATGTCGCAATGCGCCCCCGAGGACGCCCAGCACTACGATCCCATTGAGATCAGCGGCCAGGAGCCGCAGGCAGAGCAACTGCCTTCGCAGGAAGTTGAGCTGCAGTCgccaccacgaccaccacaTGGCCCCAGCCAGCTGCCCTCGCCTCACATGCATGTAACTGCCGcggaggaggagaagctgccgcctttgccgccgAAGAGGATCCGCAAGCAGGACAGCAATGCCGAGAATCGCTCGATCGAGGCCAACAACTGCAGCACCTTAGAGAGGAAGTCGCGCCAGTCGAGCTCAAAGGCAGTCGATCAGTCGCCGCCTACCAAACGTTTGCCGCCCAAGCCCTCGCAATTCAATACCCTGCCCAAGCAGAAGAAGCCGGGCTTCTTTTCCAAGCTCTTCTCCCGCCGCAAGAGCAAGCCAGACCTGAGCCAGCCCAGCGAGAACCCCACCCCCGCGGACTCCAAGCTGAGCTCCAAGGTGCCCAGCCCGAATGCCAGCCGCGAGCCCAGCATCACCCACTTCAATATGAATGATCCCATGCGGGCCTCCCTGCGCTCGGCTCGGTCCCTGCAGCCCGCCATGATCAGCCCCTCCTCGGCCCAGTCCAGCCCCGTGAAGTCGGCCAAAAAGCCTAGCAAAGTCGGCAAGCCCGTGGGCCGCAGCGTGAGCAGCGTCTCCGGCAAGCGGCCCGCCCACCTCAATGCCAGCGTGGTCCACATCCCGCTGAAGGGCGACAGCGTCAACAGCCTGCCTCAGCAGCAGAACGAGGCCTACTCGAATGCCAGCACGGTGACCTTGGGCGGCAACCTGGACCGCAGGACGGCCTCGGCTCTTCAGCTGGCGGATATACCCATTTCCGCGGGCGGCATGGAGCTGGTGGCTATTGCCGATCGGCAGAGCCTAAGGAACTTGGTCAGCTCCATTGAGGGGCAGTTTGATGTCCAGTTGGACCCGAATCTGGACCTCACCGAGGTCGAGCACTTTGCCTTGTACACGGGCGTGCCGCCCCAGGCCACGGTTAGTGAGTTCGACGAAACGTCGGCTTACTATGCGCCGGTGGATGCCGGGGAGATCCTGACGCCCGAGGAGGTGGCCCGGCGGCTGACGCTGGCTGGGGCCAGCAAATAA
Protein Sequence
MFQNQNSVAPSNGAGGAAGPGAPPMDAQQQQNLNYNGLPQHQQQQQGGKNARKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPSIEIVGYKGRAVVVVSCVTKDPPHRPHPHNLVGKEGCKKGVCTLEINSETMKAVFSNLGIQCVKKKDIEAALKAREEIRVDPYKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTQPLPPVVSEPIFDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVAKEDITVRFFEEKNGNLWEAFGEFQHTDVHKQTAITFKTPRYHTLDITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILSLDSANAKREAPTIEVIDLNTPVLEQTELSIEQAFAEAPVPPVDEEAERLRTEQEIDTIIDEKVRELEQQDQQQQQDSFETQPPTADEKITEWMKSNEDMQAPEGDPVLGSAQLEATAEPPANEEDKTLNDLLEQVAELDEIYTDYVIRRDTYNNTLQNELQSMDKAEATRPPLEVEDSFDDAATYTSLQIAFKNPVSIPMEDLMPPTPPMSQCAPEDAQHYDPIEISGQEPQAEQLPSQEVELQSPPRPPHGPSQLPSPHMHVTAAEEEKLPPLPPKRIRKQDSNAENRSIEANNCSTLERKSRQSSSKAVDQSPPTKRLPPKPSQFNTLPKQKKPGFFSKLFSRRKSKPDLSQPSENPTPADSKLSSKVPSPNASREPSITHFNMNDPMRASLRSARSLQPAMISPSSAQSSPVKSAKKPSKVGKPVGRSVSSVSGKRPAHLNASVVHIPLKGDSVNSLPQQQNEAYSNASTVTLGGNLDRRTASALQLADIPISAGGMELVAIADRQSLRNLVSSIEGQFDVQLDPNLDLTEVEHFALYTGVPPQATVSEFDETSAYYAPVDAGEILTPEEVARRLTLAGASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-