Llae018717.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- Hr39
- Assembly
- GCA_030264695.1
- Location
- JARJDU010044177.1:2740-5435[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.11 7.5e+02 -0.5 2.0 75 162 112 190 84 203 0.49 2 5 0.73 5.1e+03 -3.3 9.6 46 143 184 287 167 312 0.62 3 5 4.1e-08 0.00029 20.6 0.0 1 23 373 395 373 408 0.88 4 5 0.0015 10 5.6 0.0 77 113 427 463 401 476 0.82 5 5 3.5e-73 2.4e-69 234.9 0.1 205 408 507 705 486 705 0.96
Sequence Information
- Coding Sequence
- ATGGCGGCAGACATGAGGTCGCCGAACGTGTCCGTGACGCCTATCAACGTGGAGCCGCCGTTTGCTCCCAACCATGCGGAGCCGCTGGACAGCTCCGACGCAGAGGTTGCCCAAATCGACTTCCAATCCAGTGTCAATATGCGTCACAAAGTGAAACGCGAACCTGTAGGTGGAGAATCCGTCCCTAGGCCTATGTCATGGGAAGGCGAATTGTCGGACACAGAGCGCGACATGTGCGTGGACGACGAGGGCCATCTTCCTGAAAACCTCTCCATGCCTCAACCACCGAGCGGCGGCAGCAGTGACCTAGAACGTGCGTCTTCACTCACTTCTGCCGACTCGAAGGAATCGCCCATTATGCGATTAAAACAACCCTTGCATCACAGTAGTTATTCCCTACATTCGACGCCCAATCACTCGCCACTGTTATCGCAAAGACATCCTTTGCCAAGCCTCGTGCCCAAGGACCTCGTTCACAAAGCGCTGAATGTTCCGCCGACGCCGAGTCCGGACTCGGCGGTGCATTCGGCATATTCGGTGTTCTCGTCACCTACGCAGTCACCACTCACTCAAAGGCACGTCACCCTCACGCCGAATCTAAGCCGGAACAATAGTGATGCCTCGCATTCGAGTTGTTGTTCTTATAGTAGCGTTTCGGTGTCCGTGTCACCGACGCAACAATTTTCACCTACACATAGTCCTATTCAGgGAAGACACATGCCGAATATTCACGGCAGTCCTTTACATCACAACGTCTTGTATAGAAGTTTACAAGAAGATTCAAACACGCAATTTACGACATCGTCGGAACACGATAACGATGACACTTTAAGCGAAGAAAAGTCCTTGATGCACACGTCCTTGCCTGCACAACCTGGTATATCAAGACAACAACTTATCAATAGTCCTTGTCCGATTTGTGGTGATAAAATCTCTGGCTTCCATTATGGCATCTTTAGCTGTGAGTCTTGTAAAGGTTTCTTCAAGCGAACTGTACAGAATCGAAAGAACTACGTTTGTCTGCGCGGAGCTGTGTGTCCCGTAACCGTAGCAACGCGCAAGAAGTGTCCGGCGTGTCGCTTTGAGAAGTGCTTGCAATGCGGCATGAAGTTAGAGGCTATTCGAGAAGATCGAACTCGCGGAGGCCGTTCCACGTATCAGTGTTCGTATTCGTTGCCGCCGTCGCTTGCCAACCATCCAGAATTACGCGCGAGCGCCAGCGATTTACGCCATGGAGGTAACTTGGACGCCTCGGGCTACAACATGGGCTTCAGCATTAAAGTGGAACCGACGGAATCGACGCCCACGTCTCATGCGAAGAAGATGAGCATGCGGCATGGTGTCCCACCATTATTGCAAgaAATAATGGATGTGGAACACTTATGGCATTATAGTGAGTTggagttaaataaattgaatactGATGGCAACCTTGGTCGGGAAGGCGGCAGTGGTGCAGTGCACAATCTTTCTATGCATCCGCTCCTCGCTGGCACCGCTTTGGCAGGATCAACGGATACAAATCCTGATTTTGTGGCGAATCTGTGCAATATTGCCGACCATCGTCTGTACAAAATTGTCAAGTGGTGTAAAAGTCTGCcattatttaagaatatatCTaTTGACGATCAAATTTGCCTGCTGATTAATTCGTGGTGTGAACTGCTGTTGTTCTCATGTTGTTTTCGATCAATGTCCACTCCTGGCGAAATCCGGGTATCATTAGGAAAAAGCATTACCTTAGCACAAGCGAGAGATCTGGGGATGCAGGCCTGCATCGAACGAATGCTCAACTTTACCGAACACTTGCGACGGTTGCGTGTTGACCGTTACGAATACGTTGCCATGAAAGTTATAGTATTACTTACTTCAGacACTTCCGAGCTACGAGAAGCGGAAAAAGTACGTGCATCGCAAGAAAAGGCTCTCAAGGCACTACAGGATTATACGCTGACGCATTATCCTGATAGTCCTGCTAAATTCGGAGAACTGTTATTACGAATACCGGAGCTTCAGCGCACCTGTCaggTGGGCAAAgaaatgttaacaataaaaacaaaaaatgaagaaggaCCAAGCTTTAATCTACTTATGGAACTCCTACGTGGGGATCACTGA
- Protein Sequence
- MAADMRSPNVSVTPINVEPPFAPNHAEPLDSSDAEVAQIDFQSSVNMRHKVKREPVGGESVPRPMSWEGELSDTERDMCVDDEGHLPENLSMPQPPSGGSSDLERASSLTSADSKESPIMRLKQPLHHSSYSLHSTPNHSPLLSQRHPLPSLVPKDLVHKALNVPPTPSPDSAVHSAYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPNIHGSPLHHNVLYRSLQEDSNTQFTTSSEHDNDDTLSEEKSLMHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAVCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLANHPELRASASDLRHGGNLDASGYNMGFSIKVEPTESTPTSHAKKMSMRHGVPPLLQEIMDVEHLWHYSELELNKLNTDGNLGREGGSGAVHNLSMHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLAQARDLGMQACIERMLNFTEHLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRASQEKALKALQDYTLTHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKTKNEEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629851;
- 90% Identity
- iTF_00904168;
- 80% Identity
- iTF_00904168;