Llae009574.2
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- bab1
- Assembly
- GCA_030264695.1
- Location
- JARJDU010023038.1:154-1883[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-18 1.6e-14 53.6 0.0 1 43 48 91 48 93 0.95 2 2 1.6 3e+03 -1.8 1.3 6 15 181 190 179 203 0.86
Sequence Information
- Coding Sequence
- ATGGAGTCGGAGTCGGGATTTATCCTTTCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAATGTTGGAACACGAACCAGAGTCTCGTCCACAATTTGCGCTTCCGCGAGCGCGGCCCGCTCAAGTCCTGGAGGCCGGAGACCATGGCTGAGGCGATCTTCTCCGTGCTGAAGGAAGGCCTGTCGCTCTCTCAAGCTGCGCGCAAATATGACATACCTTACCCAACGTTTGTGCTTTATGCGAATCGCGTGCACAACATGCTTGGACCCTCTGCAGATGGAGGTTCGGATTTGAGGCCTAAGGGACGAGGCAGGCCACAGCGGATTCTCCTGGGCATTTGGCCCGACGAGCACATCCGCGGTGTGATTCGTGCTGTGGTCTTCCGAGACTCGCATCATCACATCAAAGAGGAACCGCATATTACTTACCCCCGCATTCATCAAGAACCGACTGGCAGCGTGCAAAACTACTCTAATAACAATTGTAGTAGCAACGGTTCTGATCCGAACGTGTCACCGGGTGCGGCAGCCGCCGCTGCCGTAGCTGCCGTCGCCCATGGCCTCCGGCAGCAAATGTGTAGTATGGTGGCAGCGGCCCAACACGCTAGCACTGCTCACGATACGAACCCGGTGGCATCGTTGGTCAACTCTTTGGCGCTTGCTGGACATTGCGGGACAGTCCCATTATCCAGCAATGGCATCCCTCCGATGAGTATGAACCAGATGACATCTATGAGTCACATGACCTCTATGAGTCATATGGCATCCATGCGGATGGGCAGTCCTGCTGGATGCATTCAAGACCTACGCATCTCTCCTGCCGGTTCGGCCTTAGAGAGTCCCATCGCCTCCCCTCTAGGACTCACGGTCCCCACCTCTATGGATGGTGCGCTCAATCTTGGCATGAACAATAGCATCAACAATACCATCAACAATCTTAGCAGCAATATCAGCAACAGCATGGACATGGGCGCCGCCATTGGTTCCGGCATGACGTATAAACCGAATCGTTCGAATTTCACGTCGCCGCGGCCCGAGAATCTCTTCCAGGAGGACATCGACGAATTGGTCAAACCCATTCACTCGAATACTCCCATACCCCTACCGAAACCTCCGCCAATGGCTCCGATTAAAATGGAACCAATGACGGAATGTCGAGGCGAATGA
- Protein Sequence
- MESESGFILSADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDSHHHIKEEPHITYPRIHQEPTGSVQNYSNNNCSSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGTVPLSSNGIPPMSMNQMTSMSHMTSMSHMASMRMGSPAGCIQDLRISPAGSALESPIASPLGLTVPTSMDGALNLGMNNSINNTINNLSSNISNSMDMGAAIGSGMTYKPNRSNFTSPRPENLFQEDIDELVKPIHSNTPIPLPKPPPMAPIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902156;
- 90% Identity
- -
- 80% Identity
- -