Llae015796.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- retn
- Assembly
- GCA_030264695.1
- Location
- JARJDU010037342.1:3740-5200[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-17 7.6e-14 52.1 0.1 29 89 4 62 1 62 0.93 2 2 3.5 8.2e+03 -2.5 0.0 26 37 201 212 159 214 0.53
Sequence Information
- Coding Sequence
- ATGGCGAAATCAGTATTAGATCTCTACGAATTGTACAATTTGGTAATCGCACGCGGAGGATTAGTGGACGTCATCAACAAGAAGCTATGGCAGGAAATTATCAAGGGTCTCCATTTACCCTCTTCCATTACATCGGCAGCTTTCACGCTTCGAACACAATATATGAAATACTTGTATCCCTACGAATGCGACAAGCGGCGTTTCAGTACTCCTGCAGAACTGCAAGCAGCAATCGATGGAAATCGACGGGAAGGTCGTCGCAGCAGCTATGGACAATATGACTCGGTACAAAGATCTCCAAACCCATCACACATGTCACCATTGTCTTTAGTATCTCAACAACAACAGTTAGCAGTTCGTATGAATTCCGTCATGAGTGGTGGCCTCGGTCTTCACAATGGTGCCCATCATCCCAGTCATCCAGCACCATTAGGACAACCTTTGAATACAGGCCCATTGCCAGGACTAGCTCCTAGTGAGTTCGAGGCAAGAATGATGCAATACGTGAAACTTTTGAATAAGGAAATCAGAAGTTCGGCGTCCACACCGCCAAGACAAGGCGATCAATCGCCGCCGAGTGCTACATCCCCTCTAAATCCATTGGAAATGTCACGGATGTCACTGTGgaatttgtataataacaaCCAGCCGCCCGTGGAACCTCAGAAAGAAGCCTTAAACCTTGCTGATGCGACGCCGGCTTCTATTAAACGAGAACCTGAGCATTGTGACTCGCCGCCACCGGCGAAGAAGTTTATAAAGGATGACATGGACCATTCTGCTAATCCGTCTAGTAcgcatatcaaaataaatagcCGAGggGATGCACGCAATGGTGACAATTCATTAGTTGTAAGTATGGAGTTGAATGGAGTCACATACCAAGGAGTTCTTTTCGCACAAACCACAACGACACAAAATAATGCGCCGGCAGGACGGACGGTGGCAGCATCTtaa
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKRRFSTPAELQAAIDGNRREGRRSSYGQYDSVQRSPNPSHMSPLSLVSQQQQLAVRMNSVMSGGLGLHNGAHHPSHPAPLGQPLNTGPLPGLAPSEFEARMMQYVKLLNKEIRSSASTPPRQGDQSPPSATSPLNPLEMSRMSLWNLYNNNQPPVEPQKEALNLADATPASIKREPEHCDSPPPAKKFIKDDMDHSANPSSTHIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQTTTTQNNAPAGRTVAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- -
- 80% Identity
- -