Lhae018344.1
Basic Information
- Insect
- Liopterus haemorrhoidalis
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_963971575.1
- Location
- OZ020612.1:52581093-52598308[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1 7.1e+04 -25.1 36.3 35 288 20 287 13 295 0.65 2 8 1 7.1e+04 -15.3 26.0 119 297 178 355 166 358 0.74 3 8 1 7.1e+04 -8.6 14.3 185 270 298 384 295 411 0.67 4 8 1 7.1e+04 -10.6 14.9 203 294 339 433 323 439 0.52 5 8 0.29 2.1e+04 -3.6 6.1 117 165 544 592 494 634 0.75 6 8 1 7.1e+04 -11.2 11.2 89 133 747 793 662 813 0.48 7 8 1.8e-114 1.3e-109 368.1 35.2 1 300 871 1177 871 1177 0.93 8 8 0.012 8.4e+02 1.0 4.3 121 173 1176 1228 1175 1235 0.91
Sequence Information
- Coding Sequence
- ATGGGTGCCCAAGTCAGCAACGAAGAAATGGTACCGGCCGAAAACCCGGTAAATCTTGACAAACAAgggaaaattaaaaagaaaaatggaaaaacTAAAAGtgcaaaagtaaaaaaaagtggTAGTGATAAAAGTGTTGGTGATAAAGTTGAATCAAAAAGTAATTCTTCGGCGGAAATTTCAAGCGGAAAAACAGAAAATGCAGTGACAAAAGATGTTGATAAAACCAGACATTCATCTGGTGAGAAAAACAAGAAACTAGATCCTTTAAATGCGAAAacttcacaaaataaaaatggagctattaaaaaaataaacattaaagaCGAGGGAAAAGAAGTTTGCATAGAGAGTGAAGAAAACGACAAAGAAAAAGTCAAATTAGATGAATCTAAAATCTCAATTGAAGAgaatttatttgtgaaaacGGAAGAAAAtgttgatgaaataaataaatcaaaagaaaatattgGGAAAATAGAAAATGTATGCCAAGAAGAAAGTTTAGAAAAGGAAAAATTACAAGAACTTCAAATAAATCTTTCTGAAgatactttaaattttaaaacggGAGATAATAAAGAGATTATTGAAGAATTTAAACATTCTAATAAAGAGATAGATGAAAGTGTTgaagaaaatatagaaaatgtACTCAAAGATGCAAATTTAGAAAAGGAAAAATTACAGGAATCAACTACTGATTTTTCTGAAGAAATTCTGAATTTGAAGAAAcctgaaaataaagaaattgaaGGATTAAATTCTTGTGTAGAAATAAAAGAATCTGATCTTTCAGGGGATAATTTGAAAACAGAAgaaattaatgaagaaataaataattctgtTGAAGAAATAAAGGAAACTGTtaacgaaaatgaaaatttatatacagaagaaaaagaaaatgagaCGGTAGAACACCAAACTGATCTTCCTGAAGATAGTgtaagaacagaaaataatcaagAAATTAATGATGAAGAGTCTAAAgaagaaataaatgtaaatattgtgaaaattttacctgaagaaaaagaaaaattacaagAATCAGAAACTGATTTTGAAGagaatataaatatgaaatctgaaaataaacaagaaaatattgaagaaaTAATTCAGTCTGATgtggaaattaaagaaaatgtaaaAGATAATGTAAACAAATTATCTGAAGGCAATAATTCAGATTTAAAACAAACAGATGAAAAGCAAATCGATGAAACTccagaaaatatacaaaatgaaaaagaaaataatttaattgaaaataagaaaaagtTGGAGAAATCAATAACAGAACCGTCTGCGGAAAATTTTAGTTTGACTCTTATAAAAAAAGGCGATACATCAGTTGATAACTCAGAGAAAGATTTATcagatatttcaaataatattgaaaactCAGCCAAAATAGATGATGAAGACAAAATATCTGAAAACAGTAATAACATTGATATATCTGATGATGAAATATCTAGTGAAGAATTAGAAGATTATGAGAATTTAGAAAAAGTTTTAGATGAAGAAACTTTTGATAAATCTGATAATAATCCTGATAACGAAACTATTAAagataataaagatatttatGAGAACGTATCACATGAAAACAATCAGATAATAATTGCAAATGAAACCATAAAAAACAAAGAATTTATTtcacaagaaaataaaatagaattagATCATGATTTGTCAAATGATTCCTTAGATATAAATGaggataagaaaaatattgaatcaaTGAGTGAAAACATGAAATCAGAAGAAATTACTGAAGATACAAAAGATGTTgataaaattaatgttataaCAGAACTAGAAGAGCAAATTGATGGTCCAAAAACGGACACAGAAATacaagaagatattttaaaagatttttcagACCACCCTAATGCCTCTGATGAGACTGACTTTGTAAAACAGGATATAGAAAGTATTGATTTAATTGAAACTTCAAAAAGTGATCCGGAAAATATTTCCAAAGAAGTTGAAGAAATTAATCATTCTGATCAGAATCTAATAAATACTGAAGATGATGAACAAATCAAAATTTCAGATAGTAATGTGAGAAAAGAAAATGGTGAAAAAGGACAGGAAACCACAGAAGAAATCGAAAGTGctgttactgaaaattttaataattgtgaaatcaatcaagaaaataaaaatgctgcTGAAAGTAATTCATATTCAAAAGAAAATATGGAAGAAACATTAGatgataatattgtttataaagaaGTAAATAAAAAGGAATATGGGTTAACAGAAAGTCAACCCAGATTGGATAcagataaagaaataaataataagcaaTTAGATAACTTGGAAGATTCAAGGGAAGTACaagaaattcaagaaaataTAGTCAAACCATATTCTGATTCGGCAATTTCTGAGCAATTAGAATCGTCTAATCAGTCCAGTTTTGAACCCAATCCTGATTATTTAAACAACAATGAGGAAATGACAGATTTGGAAAACGATGCAATTATGAAGCGAAGAATTAGCAGAAAATCAATTTGTCAGTTTGTACATGAAGAAGAAGATTCAGAAGAACGTGTCACGGAGTATCTTGACAAGTGCAACAAtcaaGCGGAAGCACGTCTGGCAGCAAGGCGGCAAGCTCGAGCGGAGGCGCGCGAGATTCGTATGCGGGAACTGGAGCGCCAGCAGAAGGAGCAAGAGGAGAATGCTGACAGGCAATACGACATGCTCGCCGAACCCATCACGAGGACGGCACGTACCGCAATCACCGCCAGGGAGACCACGCGACTCAACAACAGTAGTTACCTCTCCAGTAGAAGAAGTAGTGAGGATTCACTCGAGGACGGCGGCAGCCTTAGAGATGTACGGCATGAACTCAAAGAGTTGGAAGAGAAGTTCCGTAAGGCGATGGTAGCAAATGCTCAATTGGATAATGAAAAATCCGCTCAAACTTATCAGTTAGAACTTTTAAAAGACCGTATCGAAGAACTTGAAGAGGAACTATCACAGTTACGGAGAGAACATCGTGAAACATGTCGAGAGAACGATCAGATGAAACGGTTAACAACGAGGTTAAAGGAGGAGTTCACAGCTTGCAAAACAGAGCTCGAGGAAAGAGATAGACTGATTATGGAGAAGGGTTTGGTGATTGTCGGAGAAATTGTACCGGAAGATGATGGTGGAGGAGACCCTAGCACTGTTAGGACGCCAAAGAAAGCGTTAGTTAGTATAGAAAATGCTGAATTGTTGGAAAATGCAGGAGAGGGCAGTTTAGATGTTCGGTTGAAGAAATTCGCTGAAGAAAAACGAGAACTGATGGATCAACTGAGTCACTTAAGACTAGAAttagaagaagaaagaagtagGAAGAAACGAAGAACAAGTACTATAACAGCAAATGCTTCATTACAGAACGGACCAAGTCTTGAGTCAGATACATTGGACGTTATAGACATTCAacgaGAAGCAAATAAACAACTTGCAGATTACAAATTCCGTCTCCAAAAGTCGGAACAAGACATAGCAACACTTCAAGCAACAGTTGCAAGATTAGAAAGTCAAGTAATACGTTACAAATCTGCAGCGGAAGCATCTGAAAAAGCAGAAGATGAACTTAAAGTTGAAAAACGAAAACTTCAAAGAGAGgtgAAAGAGTCCCAGAGTAGAATCGAAGAACTAGAAACAACAAACAATCACTTACAACGAAGATTAGAAAAAGTAAAGAATGCAAAATCGGCCTTGCTCAAAGAACTGTGA
- Protein Sequence
- MGAQVSNEEMVPAENPVNLDKQGKIKKKNGKTKSAKVKKSGSDKSVGDKVESKSNSSAEISSGKTENAVTKDVDKTRHSSGEKNKKLDPLNAKTSQNKNGAIKKINIKDEGKEVCIESEENDKEKVKLDESKISIEENLFVKTEENVDEINKSKENIGKIENVCQEESLEKEKLQELQINLSEDTLNFKTGDNKEIIEEFKHSNKEIDESVEENIENVLKDANLEKEKLQESTTDFSEEILNLKKPENKEIEGLNSCVEIKESDLSGDNLKTEEINEEINNSVEEIKETVNENENLYTEEKENETVEHQTDLPEDSVRTENNQEINDEESKEEINVNIVKILPEEKEKLQESETDFEENINMKSENKQENIEEIIQSDVEIKENVKDNVNKLSEGNNSDLKQTDEKQIDETPENIQNEKENNLIENKKKLEKSITEPSAENFSLTLIKKGDTSVDNSEKDLSDISNNIENSAKIDDEDKISENSNNIDISDDEISSEELEDYENLEKVLDEETFDKSDNNPDNETIKDNKDIYENVSHENNQIIIANETIKNKEFISQENKIELDHDLSNDSLDINEDKKNIESMSENMKSEEITEDTKDVDKINVITELEEQIDGPKTDTEIQEDILKDFSDHPNASDETDFVKQDIESIDLIETSKSDPENISKEVEEINHSDQNLINTEDDEQIKISDSNVRKENGEKGQETTEEIESAVTENFNNCEINQENKNAAESNSYSKENMEETLDDNIVYKEVNKKEYGLTESQPRLDTDKEINNKQLDNLEDSREVQEIQENIVKPYSDSAISEQLESSNQSSFEPNPDYLNNNEEMTDLENDAIMKRRISRKSICQFVHEEEDSEERVTEYLDKCNNQAEARLAARRQARAEAREIRMRELERQQKEQEENADRQYDMLAEPITRTARTAITARETTRLNNSSYLSSRRSSEDSLEDGGSLRDVRHELKELEEKFRKAMVANAQLDNEKSAQTYQLELLKDRIEELEEELSQLRREHRETCRENDQMKRLTTRLKEEFTACKTELEERDRLIMEKGLVIVGEIVPEDDGGGDPSTVRTPKKALVSIENAELLENAGEGSLDVRLKKFAEEKRELMDQLSHLRLELEEERSRKKRRTSTITANASLQNGPSLESDTLDVIDIQREANKQLADYKFRLQKSEQDIATLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVKESQSRIEELETTNNHLQRRLEKVKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -